BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00018414
         (987 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein A...   142   3e-31
gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [...   141   3e-31
gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indi...   141   4e-31
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe...   140   6e-31
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...   140   6e-31
gb|EMS68524.1| Cyclopropane-fatty-acyl-phospholipid synthase [Tr...   139   2e-30
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...   139   2e-30
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   138   3e-30
gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlise...   138   4e-30
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze...   137   8e-30
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise...   135   2e-29
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   135   2e-29
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...   135   2e-29
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...   135   2e-29
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...   135   2e-29
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...   135   2e-29
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...   135   3e-29
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...   135   3e-29
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...   135   3e-29
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...   135   3e-29

>ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 498

 Score =  142 bits (357), Expect = 3e-31
 Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 1/283 (0%)
 Frame = -3

Query: 961 LKIGLCYRIGDGKSVRIWNHPWVPGLPSF-IPAPPFSHPSTLTWVSELLDSSGCMWNLNL 785
           L  G+ +++GDG  ++IW   W+P +P + +  PP      + +V EL++     WN+ +
Sbjct: 54  LAAGVHWKVGDGTQIQIWTDDWIPEVPRYRVHKPPNCE---IQFVHELINHDSRTWNVQV 110

Query: 784 VNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSS 605
           ++  F P     I SIPL      DR+IW P   G +TVKS+Y    +  M      +SS
Sbjct: 111 ISSLFPPDITLQICSIPLSRRVLTDRVIWKPEKRGFYTVKSAYWIARSTVMPNALASTSS 170

Query: 604 SDISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVEN 425
            +  L   +WK++WK +V GK+ H  WR  HD++PT+  L  KG      C  C    E 
Sbjct: 171 GNAFL--PLWKKLWKARVPGKVMHCAWRACHDLLPTRAKLVTKGYEGTLKCLSCPHPCET 228

Query: 424 LEHILFHCVRAKIVWKLAPISWEFDSNSSFTFKHWWMFISRVQKKEFWKERLQFSSYILW 245
             H++  C  A+ +   + ++     +S F FK W +     Q      ++ Q    I+W
Sbjct: 229 TAHLVCACPIAQTILLGSHLNITVLMSSIFNFKEWML----EQATSLSDDKFQKLLMIIW 284

Query: 244 WLWRTRNLCIF*NNRLSAKDTIDGAVSEWIEYSNVFSSYDNPT 116
            LWR RN  ++ + + +A++ I G +S + E++ +      P+
Sbjct: 285 GLWRNRNNMLWSDKQQTAQEIICGTMSWYHEFTTINYPQQKPS 327


>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
          Length = 925

 Score =  141 bits (356), Expect = 3e-31
 Identities = 75/198 (37%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
 Frame = -3

Query: 961  LKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGC-MWNLNL 785
            L++G  ++IGDGKSVRIW   WVP   +F+           T VSEL+ + G   W+L  
Sbjct: 487  LEMGSRFQIGDGKSVRIWGDKWVPRPAAFVVITSPLDGMENTKVSELICNEGSPQWDLQK 546

Query: 784  VNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSS 605
            +N  F P +V   + IPL   +  DR++W     G FTVKS+Y+  +  R++  D   SS
Sbjct: 547  LNNLFLPVDVVDFVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYRVAL--RVTSGDEDESS 604

Query: 604  SDISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVEN 425
            S  S    +W+ +W   V  K+K F WR  HDI+PTK NL +KG+ +  +C FCG+  E+
Sbjct: 605  SSNSDTSMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGVDMQDMCMFCGDITES 664

Query: 424  LEHILFHCVRAKIVWKLA 371
              H+L  C  A   W ++
Sbjct: 665  ALHVLAMCPFAVATWNIS 682


>gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indica Group]
          Length = 666

 Score =  141 bits (355), Expect = 4e-31
 Identities = 86/254 (33%), Positives = 128/254 (50%), Gaps = 3/254 (1%)
 Frame = -3

Query: 976  HALYALKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMW 797
            H L  LK GL +RIG+G  VRIW  PW+P   S            + WV++LLD++   W
Sbjct: 267  HGLELLKEGLVWRIGNGTRVRIWRDPWIPR-SSTRKVITSQGRCRIKWVADLLDAN-TNW 324

Query: 796  NLNLVNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDN 617
            N  LV Q F P +  AILSI        D L W    SG FTVK++Y+  +  +++  ++
Sbjct: 325  NEQLVRQIFLPMDADAILSIRTSRQGEDDFLAWHLEKSGIFTVKTAYRLAIENKLNSKNS 384

Query: 616  PSSSSDISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTL--CQFC 443
             +S S I   K +W  +W   V  K++ F WR   D + T+VN  +KG  L+ L  C  C
Sbjct: 385  NASGSSIEGSKSLWNTIWSCPVPPKVRIFAWRVASDCLATRVN--KKGRRLEALDTCTLC 442

Query: 442  GESVENLEHILFHCVRAKIVWKLAPISWEFDSNSSFTFKHW-WMFISRVQKKEFWKERLQ 266
            G   E   H L  C  A+ +W      W+    +++T++   W+ ++ V+  E   ER+ 
Sbjct: 443  GTESETAFHALCRCTYARALWAALREVWQIPDQTTWTYQGTKWLLLTLVKLSEM--ERM- 499

Query: 265  FSSYILWWLWRTRN 224
            F   +LW +W  RN
Sbjct: 500  FILMLLWRIWHVRN 513


>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
          Length = 1275

 Score =  140 bits (354), Expect = 6e-31
 Identities = 76/198 (38%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
 Frame = -3

Query: 961  LKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGC-MWNLNL 785
            L++G  ++IGDGKSVRIW   WVP   +F            T VSEL+ + G   W+L  
Sbjct: 856  LEMGSRFQIGDGKSVRIWGDKWVPRPATFAVITSPLDGMENTKVSELICNEGSPQWDLQK 915

Query: 784  VNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSS 605
            +N  F P +V  I+ IPL   +  DR++W     G FTVKS+Y+  +  R++  D   SS
Sbjct: 916  LNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYRVAL--RVTSGDEDESS 973

Query: 604  SDISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVEN 425
            S  S    +W+ +W   V  K+K F WR  HDI+PTK NL +KG+ +  +C FCG+  E+
Sbjct: 974  SSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGVDMQDMCMFCGDITES 1033

Query: 424  LEHILFHCVRAKIVWKLA 371
              H+L  C  A   W ++
Sbjct: 1034 ALHVLAMCPFAVATWNIS 1051


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score =  140 bits (354), Expect = 6e-31
 Identities = 76/198 (38%), Positives = 109/198 (55%), Gaps = 1/198 (0%)
 Frame = -3

Query: 961  LKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGC-MWNLNL 785
            L++G  ++IGDGKSVRIW   WVP   +F            T VSEL+ + G   W+L  
Sbjct: 1336 LEMGSRFQIGDGKSVRIWGDKWVPRPATFAVITSPLDGMENTKVSELICNEGSPQWDLQK 1395

Query: 784  VNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSS 605
            +N  F P +V  I+ IPL   +  DR++W     G FTVKS+Y+  +  R++  D   SS
Sbjct: 1396 LNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYRVAL--RVTSGDEDESS 1453

Query: 604  SDISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVEN 425
            S  S    +W+ +W   V  K+K F WR  HDI+PTK NL +KG+ +  +C FCG+  E+
Sbjct: 1454 SSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIKKGVDMQDMCMFCGDITES 1513

Query: 424  LEHILFHCVRAKIVWKLA 371
              H+L  C  A   W ++
Sbjct: 1514 ALHVLAMCPFAVATWNIS 1531


>gb|EMS68524.1| Cyclopropane-fatty-acyl-phospholipid synthase [Triticum urartu]
          Length = 1317

 Score =  139 bits (350), Expect = 2e-30
 Identities = 89/285 (31%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
 Frame = -3

Query: 985  SWIHALYALKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSG 806
            S +  +  +K G+ +R+G G+++RIW  PW+P      P  P  + + LT V+ELLD   
Sbjct: 902  SILQGVEVIKEGMVWRVGTGENIRIWQDPWLPTCAVRFPRSPRGN-TILTKVAELLDPDT 960

Query: 805  CMWNLNLVNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSY--QAIMNKRM 632
              W+  LV QTFN  E   IL IP+  H   D L W       F+V+S+Y  Q  M KR 
Sbjct: 961  HSWDEQLVRQTFNTEEAAVILKIPVFQHHE-DFLAWQFDTKELFSVRSAYRVQIDMLKRQ 1019

Query: 631  SELDNPSSSSDISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLC 452
            +      SS   +   K+W+E+WK++  GK+ HF+WR  H+  P   N+ R G+ LDT C
Sbjct: 1020 ARRQQGESSLGDTGNSKLWQELWKVKCPGKVHHFMWRVAHNSHPMLRNIERIGVELDTTC 1079

Query: 451  QFCGESVENLEHILFHCVRAKIVWKLAPI-SWEFDSNSSFTFKHWWMFISRVQKKEFWKE 275
              C    E+  H+ F C   K VW++  + +   D     +     ++I  + +++  K 
Sbjct: 1080 VICHRLPEDGSHLFFRCKEVKKVWRVCDLEAIRLDLLQCLSPHELLLYIFALPEEKKLK- 1138

Query: 274  RLQFSSYILWWLWRTRNLCIF*NNRLSAKD---TIDGAVSEWIEY 149
                   +LW  W  RN      NR   +     +   V+EW E+
Sbjct: 1139 ----IICLLWLWWTERNKANHKQNRAKPEGFYFLLQKHVAEWREF 1179


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score =  139 bits (349), Expect = 2e-30
 Identities = 88/284 (30%), Positives = 136/284 (47%), Gaps = 11/284 (3%)
 Frame = -3

Query: 937 IGDGKSVRIWNHPWVPGLPSFIPAPPF-SHPSTLTWVSELLDSSGCMWNLNLVNQTFNPY 761
           IGDG  + +W  PW+  LPS  P+ P  +H   LT V+ LL+  G  WN  +V   FNP 
Sbjct: 3   IGDGSKINLWTMPWIRNLPSHKPSTPMPAHHEDLT-VNYLLNLEGLSWNQQIVTSIFNPQ 61

Query: 760 EVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSSSDISLIKK 581
           +  AILSIPL +    D  IW    +G +TVKS+Y+       S+L +P  S+  +    
Sbjct: 62  DAAAILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRI-----CSDLLHPHDSAHNN---S 113

Query: 580 MWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVENLEHILFHC 401
            W  +W L +  +++ FLWR  H+ +PT+VNL+ +GI  +  C       E   H+ F C
Sbjct: 114 SWMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFENFAECHTHLFFVC 173

Query: 400 VRAKIVWK----------LAPISWEFDSNSSFTFKHWWMFISRVQKKEFWKERLQFSSYI 251
            +A   WK          L P++  F +   F F H               ++ Q +  +
Sbjct: 174 AKAMDCWKNIGLHVVLSELLPLANNF-TTLLFDFMH-----------RLCSQQQQAAGML 221

Query: 250 LWWLWRTRNLCIF*NNRLSAKDTIDGAVSEWIEYSNVFSSYDNP 119
           LW LW++RN+ ++ +   +   TI  A     E+S + S+   P
Sbjct: 222 LWSLWKSRNIKLWDSTDTTTAITISRAKDTLHEWSCMQSAKTQP 265


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  138 bits (348), Expect = 3e-30
 Identities = 80/282 (28%), Positives = 141/282 (50%), Gaps = 3/282 (1%)
 Frame = -3

Query: 985  SWIHALYALKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPP--FSHPSTLTWVSELLDS 812
            S + A   ++ G+C  IGDG+   IW  PWVP L  +  A     S       V EL+ +
Sbjct: 919  SILSARAVIQKGMCRVIGDGRDTTIWGDPWVPSLERYSIAATEGVSEDDGPQKVCELISN 978

Query: 811  SGCMWNLNLVNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSY-QAIMNKR 635
                WN+ L+N  F P+E  AI  IP+      D+ +W+   +G+FTV+S+Y   ++  R
Sbjct: 979  D--RWNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDR 1036

Query: 634  MSELDNPSSSSDISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTL 455
             +    PS+S   +L  K+W+++WK ++  K+K F W+  H+ +    N+ ++G+ +D  
Sbjct: 1037 KT---GPSTSRGPNL--KLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGA 1091

Query: 454  CQFCGESVENLEHILFHCVRAKIVWKLAPISWEFDSNSSFTFKHWWMFISRVQKKEFWKE 275
            C  CGE  E  EH+++ C  +   W ++P+     +  + +F+ W   +    K   W  
Sbjct: 1092 CPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKDTEWWA 1151

Query: 274  RLQFSSYILWWLWRTRNLCIF*NNRLSAKDTIDGAVSEWIEY 149
                   I W +W  RN  +F   +L+ ++ ++ AV   +E+
Sbjct: 1152 LFWM---ICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEF 1190


>gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlisea aurea]
          Length = 474

 Score =  138 bits (347), Expect = 4e-30
 Identities = 83/242 (34%), Positives = 122/242 (50%)
 Frame = -3

Query: 952 GLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMWNLNLVNQT 773
           GL +RIGDG S+ +W  PW+P   +F P+ P         V EL+ S+   WNL+ + QT
Sbjct: 37  GLRWRIGDGSSIDVWKDPWIPDTFAFKPSSPAPLGMANMRVKELIISNQAEWNLSRLRQT 96

Query: 772 FNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSSSDIS 593
           F+  +V  IL+IPL  +   DRLIW     G+++VK+ YQ +  K  SE+++P SS   +
Sbjct: 97  FSSSDVHCILAIPLAKNPYPDRLIWHFTRQGEYSVKTGYQLL--KSTSEMNSPGSSRSNA 154

Query: 592 LIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVENLEHI 413
               MW+ +WKL++  +I  F WR    I+P K +L R+ I  D  C  C E  E   H 
Sbjct: 155 NKILMWQALWKLKLPMRILTFNWRFGKHILPLKDSLVRRRIGTDPTCSACEEDRETWFHA 214

Query: 412 LFHCVRAKIVWKLAPISWEFDSNSSFTFKHWWMFISRVQKKEFWKERLQFSSYILWWLWR 233
              C  ++ VW+L   S +     S     W   +SR    +   E+       LW +WR
Sbjct: 215 FISCSFSQAVWRLGGFSMDMAGLESLHPGDW--ILSRFH--QLHTEQFAGLLVTLWSIWR 270

Query: 232 TR 227
            R
Sbjct: 271 HR 272


>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
          Length = 472

 Score =  137 bits (344), Expect = 8e-30
 Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 2/203 (0%)
 Frame = -3

Query: 979 IHALYALKIGLCYRIGDGKSVRIWNHPWVP-GLPSFIPAPPFSHPSTLTWVSELLDSSGC 803
           +  L+ LK GL +RIGDG  V IW  PW+P G    +  P   + S L  V+EL+D    
Sbjct: 19  LKGLHLLKEGLIWRIGDGNQVNIWVDPWIPRGETRRVITP--RNGSLLHKVAELIDPITG 76

Query: 802 MWNLNLVNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSEL 623
            W+  LV  TF   +   IL+IP++     D L W   P G F+VKS+Y A+ ++R    
Sbjct: 77  SWDCRLVRDTFLQEDADCILAIPIQE-GMEDTLAWHGDPKGNFSVKSAY-ALASRRRDHH 134

Query: 622 DNPSSSSDIS-LIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQF 446
           +N  +SS IS   + +WK +W + V  KIK FLWR  H+  P +VN++R+GI ++TLC  
Sbjct: 135 NNADASSSISGRGENVWKSIWNVNVTNKIKMFLWRLAHNSHPVRVNIARRGIKIETLCPM 194

Query: 445 CGESVENLEHILFHCVRAKIVWK 377
           C    E+  H+   C + K VW+
Sbjct: 195 CFRLDEDGGHLFLKCKKVKQVWR 217


>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
          Length = 1503

 Score =  135 bits (340), Expect = 2e-29
 Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
 Frame = -3

Query: 952  GLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMWNLNLVNQT 773
            G+ + IGDG SV IW+ PW+P  P+F P          + V+ L+DS    W++  + + 
Sbjct: 1259 GIRHLIGDGSSVDIWHDPWIPKPPTFKPTNLLGERRRAS-VATLIDSRTKWWDVGRIREK 1317

Query: 772  FNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSSSDIS 593
            F+P +   I+SIPL    S D+++W    SG +TV+S+Y  + + R+   +  SSSSD  
Sbjct: 1318 FDPVDANHIISIPLSESPSEDKILWHYSKSGTYTVRSAYHLVRSLRV---EVSSSSSDSR 1374

Query: 592  LIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVENLEHI 413
            +  K+W  +WK     KI  F+WR  H  +PT   L R+ I +D  C  C    E+  HI
Sbjct: 1375 VTPKVWDLIWKHACCPKIGLFMWRLAHGCLPTNETLWRRRIPIDKECSICLNRTESDRHI 1434

Query: 412  LFHCVRAKIVWKLAPISWEFDS--NSSFTFKHWWMFISRVQKKEFWKERLQFSSYILWWL 239
            L  C  A  VW L+ + W   +      +   W   +S   K   +  RL   ++ LWW 
Sbjct: 1435 LLECPPAIQVWALSDLPWGAINTWRDGASAIDWISSVSATLKPAAF-SRLMTIAWFLWWK 1493

Query: 238  WRTR 227
              +R
Sbjct: 1494 RNSR 1497


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  135 bits (340), Expect = 2e-29
 Identities = 87/272 (31%), Positives = 134/272 (49%), Gaps = 12/272 (4%)
 Frame = -3

Query: 985  SWIHALYALKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLT---WVSELLD 815
            S I A   +  GL  R+G G S+ +WN PW+P      P P     S +     V  L+D
Sbjct: 694  SMISARSLVYKGLIKRVGSGASISVWNDPWIPAQ---FPRPAKYGGSIVDPSLKVKSLID 750

Query: 814  SSGCMWNLNLVNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKR 635
            S    WN++L+ + F+P +V  I ++P+ + +  D L W    +G +TVKS Y       
Sbjct: 751  SRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHT----- 805

Query: 634  MSELDNPSSSS----DISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIV 467
             + LD    ++    D++ +K     +WK+Q   K++HFLW+     VP   NL ++GI+
Sbjct: 806  -ARLDLNEGTTLIGPDLTTLKAY---IWKVQCPPKLRHFLWQILSGCVPVSENLRKRGIL 861

Query: 466  LDTLCQFCGESVENLEHILFHCVRAKIVWKLAPISWE---FDSNSSFT-FKH-WWMFISR 302
             D  C  CG S E++ H LF C  A+ +W L+ I      F SNS FT   H +W   S 
Sbjct: 862  CDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIFTNLDHLFWRIPSG 921

Query: 301  VQKKEFWKERLQFSSYILWWLWRTRNLCIF*N 206
            V    +         +I+W++W+ RN  +F N
Sbjct: 922  VDSAPY--------PWIIWYIWKARNEKVFEN 945


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score =  135 bits (340), Expect = 2e-29
 Identities = 71/199 (35%), Positives = 111/199 (55%)
 Frame = -3

Query: 976  HALYALKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMW 797
            H L  +K G+ +RIG+G+SVR+W  PW+P   S  P  P ++   + WV++L+  +G MW
Sbjct: 1282 HGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPITPKNN-CRIKWVADLMLDNG-MW 1339

Query: 796  NLNLVNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDN 617
            + N +NQ F P +V+ IL +   S    D + W P   G F+V+++Y+   N    E   
Sbjct: 1340 DANKINQIFLPVDVEIILKLRTSSRDEEDFIAWHPDKLGNFSVRTAYRLAENWAKEEAS- 1398

Query: 616  PSSSSDISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGE 437
             SSSSD++ I+K W+ +WK  V  K+K F WR   + +PT  N  ++ + +   C  CG 
Sbjct: 1399 -SSSSDVN-IRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKKRNLEISDTCVICGM 1456

Query: 436  SVENLEHILFHCVRAKIVW 380
              E+  H L  C +AK +W
Sbjct: 1457 EKEDTMHALCRCPQAKHLW 1475


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score =  135 bits (340), Expect = 2e-29
 Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 2/200 (1%)
 Frame = -3

Query: 970 LYALKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMWNL 791
           L  L+ G+ +R+G+G ++ IW+ PW+P   +  P  P    + +T V EL+D S   W++
Sbjct: 153 LLTLRDGMIWRVGNGAAINIWSDPWIPSDHTRRPITPRGR-NLVTRVEELIDPSTGSWDV 211

Query: 790 NLVNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPS 611
            L+ QTF P +V  I +IP+      D L W     G F+VKS+Y+   +  +      S
Sbjct: 212 ELLTQTFWPEDVNMIRTIPVHIEMD-DMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGS 270

Query: 610 SS-SDISLIKKM-WKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGE 437
           +  S+ S  ++M WK++WK+Q+ GK+KHF+WR  H+I+  +VNL ++G+ LD+ C  C  
Sbjct: 271 AGLSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNR 330

Query: 436 SVENLEHILFHCVRAKIVWK 377
             E+  H+ F C + K VW+
Sbjct: 331 MNEDAGHLFFKCKKVKKVWQ 350


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  135 bits (340), Expect = 2e-29
 Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 2/200 (1%)
 Frame = -3

Query: 970  LYALKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMWNL 791
            L  L+ G+ +R+G+G ++ IW+ PW+P   +  P  P    + +T V EL+D S   W++
Sbjct: 1046 LLTLRDGMIWRVGNGAAINIWSDPWIPSDHTRRPITPRGR-NLVTRVEELIDPSTGSWDV 1104

Query: 790  NLVNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPS 611
             L+ QTF P +V  I +IP+      D L W     G F+VKS+Y+   +  +      S
Sbjct: 1105 ELLTQTFWPEDVNMIRTIPVHIEMD-DMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGS 1163

Query: 610  SS-SDISLIKKM-WKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGE 437
            +  S+ S  ++M WK++WK+Q+ GK+KHF+WR  H+I+  +VNL ++G+ LD+ C  C  
Sbjct: 1164 AGLSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNR 1223

Query: 436  SVENLEHILFHCVRAKIVWK 377
              E+  H+ F C + K VW+
Sbjct: 1224 MNEDAGHLFFKCKKVKKVWQ 1243


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score =  135 bits (340), Expect = 2e-29
 Identities = 71/199 (35%), Positives = 111/199 (55%)
 Frame = -3

Query: 976  HALYALKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMW 797
            H L  +K G+ +RIG+G+SVR+W  PW+P   S  P  P ++   + WV++L+  +G MW
Sbjct: 1310 HGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPITPKNN-CRIKWVADLMLDNG-MW 1367

Query: 796  NLNLVNQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDN 617
            + N +NQ F P +V+ IL +   S    D + W P   G F+V+++Y+   N    E   
Sbjct: 1368 DANKINQIFLPVDVEIILKLRTSSRDEEDFIAWHPDKLGNFSVRTAYRLAENWAKEEAS- 1426

Query: 616  PSSSSDISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGE 437
             SSSSD++ I+K W+ +WK  V  K+K F WR   + +PT  N  ++ + +   C  CG 
Sbjct: 1427 -SSSSDVN-IRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKKRNLEISDTCVICGM 1484

Query: 436  SVENLEHILFHCVRAKIVW 380
              E+  H L  C +AK +W
Sbjct: 1485 EKEDTMHALCRCPQAKHLW 1503


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score =  135 bits (339), Expect = 3e-29
 Identities = 81/264 (30%), Positives = 134/264 (50%)
 Frame = -3

Query: 961  LKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMWNLNLV 782
            ++ GL +RIGDGK V+++   W+P   +F P  P S P   T VS L+D   C W  +++
Sbjct: 329  IRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISPPSLPLDTT-VSVLIDEDQC-WRDDVI 386

Query: 781  NQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSSS 602
             Q F+  +   IL IPL    S D+++W     G ++VKS YQ  +  +    + PSSS 
Sbjct: 387  RQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFP--NRPSSSK 444

Query: 601  DISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVENL 422
            + +     W  +W LQ+  K+K F+WR  +D++PT  NL ++ I+    CQ C    E +
Sbjct: 445  EDN---NSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETI 501

Query: 421  EHILFHCVRAKIVWKLAPISWEFDSNSSFTFKHWWMFISRVQKKEFWKERLQFSSYILWW 242
             H LF C  ++ +WKL     E  +          + ++   ++   K  ++    + W 
Sbjct: 502  FHSLFDCKASRKIWKLTTFEEEVKALKCKDVLS--LLLALADRRS--KTEMELIVAVCWS 557

Query: 241  LWRTRNLCIF*NNRLSAKDTIDGA 170
            +W +RNL IF N +   + ++ GA
Sbjct: 558  IWHSRNLFIFQNKKEDFQLSVAGA 581


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score =  135 bits (339), Expect = 3e-29
 Identities = 81/264 (30%), Positives = 134/264 (50%)
 Frame = -3

Query: 961  LKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMWNLNLV 782
            ++ GL +RIGDGK V+++   W+P   +F P  P S P   T VS L+D   C W  +++
Sbjct: 532  IRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISPPSLPLDTT-VSVLIDEDQC-WRDDVI 589

Query: 781  NQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSSS 602
             Q F+  +   IL IPL    S D+++W     G ++VKS YQ  +  +    + PSSS 
Sbjct: 590  RQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFP--NRPSSSK 647

Query: 601  DISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVENL 422
            + +     W  +W LQ+  K+K F+WR  +D++PT  NL ++ I+    CQ C    E +
Sbjct: 648  EDN---NSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETI 704

Query: 421  EHILFHCVRAKIVWKLAPISWEFDSNSSFTFKHWWMFISRVQKKEFWKERLQFSSYILWW 242
             H LF C  ++ +WKL     E  +          + ++   ++   K  ++    + W 
Sbjct: 705  FHSLFDCKASRKIWKLTTFEEEVKALKCKDVLS--LLLALADRRS--KTEMELIVAVCWS 760

Query: 241  LWRTRNLCIF*NNRLSAKDTIDGA 170
            +W +RNL IF N +   + ++ GA
Sbjct: 761  IWHSRNLFIFQNKKEDFQLSVAGA 784


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score =  135 bits (339), Expect = 3e-29
 Identities = 80/254 (31%), Positives = 129/254 (50%), Gaps = 4/254 (1%)
 Frame = -3

Query: 961  LKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMWNLNLV 782
            +K G+ +RIGDGK V ++   W+P   +F P  P + P   T V++L+DS    W ++ +
Sbjct: 1012 IKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPKTLPHE-TVVADLIDSEN-KWRVDRL 1069

Query: 781  NQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSSS 602
             Q F   +++AIL I L S    D ++W     G+++VKS YQ  +N+        S+SS
Sbjct: 1070 EQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSS 1129

Query: 601  DISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVENL 422
                  ++WK  W L +  K+K F+WR   +I+PT  NL ++  + + +CQ C   VE +
Sbjct: 1130 S-----RLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETV 1184

Query: 421  EHILFHCVRAKIVWKLAPISWEFDSNSSFTFKHWWMFISRVQKKEFWKERLQFSSYIL-- 248
             H+L  C  A+ +W LAP+  +   +      H   F S +Q  E W       + ++  
Sbjct: 1185 SHVLIECKAARKIWDLAPLIVQPSKD------HNQDFFSAIQ--EMWSRSSTAEAELMIV 1236

Query: 247  --WWLWRTRNLCIF 212
              W +W  RN  IF
Sbjct: 1237 YCWVIWSARNKFIF 1250


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 765

 Score =  135 bits (339), Expect = 3e-29
 Identities = 80/254 (31%), Positives = 129/254 (50%), Gaps = 4/254 (1%)
 Frame = -3

Query: 961  LKIGLCYRIGDGKSVRIWNHPWVPGLPSFIPAPPFSHPSTLTWVSELLDSSGCMWNLNLV 782
            +K G+ +RIGDGK V ++   W+P   +F P  P + P   T V++L+DS    W ++ +
Sbjct: 325  IKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPKTLPHE-TVVADLIDSEN-KWRVDRL 382

Query: 781  NQTFNPYEVKAILSIPLKSHSSRDRLIWIPCPSGKFTVKSSYQAIMNKRMSELDNPSSSS 602
             Q F   +++AIL I L S    D ++W     G+++VKS YQ  +N+        S+SS
Sbjct: 383  EQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSS 442

Query: 601  DISLIKKMWKEMWKLQVKGKIKHFLWRCFHDIVPTKVNLSRKGIVLDTLCQFCGESVENL 422
                  ++WK  W L +  K+K F+WR   +I+PT  NL ++  + + +CQ C   VE +
Sbjct: 443  S-----RLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETV 497

Query: 421  EHILFHCVRAKIVWKLAPISWEFDSNSSFTFKHWWMFISRVQKKEFWKERLQFSSYIL-- 248
             H+L  C  A+ +W LAP+  +   +      H   F S +Q  E W       + ++  
Sbjct: 498  SHVLIECKAARKIWDLAPLIVQPSKD------HNQDFFSAIQ--EMWSRSSTAEAELMIV 549

Query: 247  --WWLWRTRNLCIF 212
              W +W  RN  IF
Sbjct: 550  YCWVIWSARNKFIF 563