BLASTX nr result

ID: Rehmannia26_contig00018385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00018385
         (366 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344237.1| PREDICTED: micronuclear linker histone polyp...    56   4e-06
ref|XP_004238839.1| PREDICTED: uncharacterized protein LOC101253...    55   1e-05

>ref|XP_006344237.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X1
           [Solanum tuberosum] gi|565354681|ref|XP_006344238.1|
           PREDICTED: micronuclear linker histone polyprotein-like
           isoform X2 [Solanum tuberosum]
          Length = 682

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
 Frame = -3

Query: 358 QVSVAQGGKYISKKSAKGSEEKTSKRVNNVPVRSKAGNKPSEADKRPMHRTSKNEP---- 191
           QVSVA G   ISK++ K    K ++R ++V +  K G KP       + R++   P    
Sbjct: 334 QVSVASGKGTISKQAYKDMPSKPNRRHSDVSLTRK-GEKPRLDAPGALLRSTARMPKSEV 392

Query: 190 --GSKAKGISDIKRSEKQSRNGRIEEPQSSTLRKVSNRVHQRANRINPAVGMPQPCIKQD 17
             GSKA  ++  K +E+Q +  +    + S   KVS+RVHQ  NR   +V   QP +KQ+
Sbjct: 393 CSGSKANVLNQQKSTEQQPKARKAAASRPSCTEKVSHRVHQSVNRDKQSVSSCQPGMKQN 452


>ref|XP_004238839.1| PREDICTED: uncharacterized protein LOC101253184 [Solanum
           lycopersicum]
          Length = 685

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
 Frame = -3

Query: 358 QVSVAQGGKYISKKSAKGSEEKTSKRVNNVPVRSKAGNKPS----EADKRPMHRTSKNE- 194
           QVSVA G   ISK++ K    K ++R ++V   ++ G KP      A  R   R  K E 
Sbjct: 337 QVSVASGKGTISKQAYKDMPSKPNRRHSDVSF-TRRGEKPRLDAPGALLRSTARMQKPEV 395

Query: 193 -PGSKAKGISDIKRSEKQSRNGRIEEPQSSTLRKVSNRVHQRANRINPAVGMPQPCIKQD 17
             GSKA  I+  K +E+Q +  +    ++S+  KVS+RVHQ  NR   +V   +P +KQ+
Sbjct: 396 RSGSKANVINQQKSTEQQPKARKAAASRASSTEKVSHRVHQSVNRDKQSVNSCKPDMKQN 455


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