BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00018232
         (848 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY03692.1| Gag protease polyprotein [Theobroma cacao]             108   3e-21
emb|CAN72584.1| hypothetical protein VITISV_001910 [Vitis vinifera]   107   7e-21
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom...   105   2e-20
gb|EOY20371.1| Gag protease polyprotein-like protein [Theobroma ...   104   4e-20
gb|EMJ28581.1| hypothetical protein PRUPE_ppb016096mg [Prunus pe...   101   3e-19
gb|EOY26216.1| Gag protease polyprotein [Theobroma cacao]             100   1e-18
emb|CAN81227.1| hypothetical protein VITISV_038888 [Vitis vinifera]    99   2e-18
gb|EOY31906.1| Gag protease polyprotein [Theobroma cacao]              98   4e-18
gb|EOY08512.1| Gag protease polyprotein [Theobroma cacao]              97   6e-18
gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao]    97   1e-17
gb|EOY26650.1| Gag protease polyprotein [Theobroma cacao]              96   2e-17
gb|EOY26606.1| Gag protease polyprotein [Theobroma cacao]              96   2e-17
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...    95   3e-17
gb|EOX98886.1| Gag protease polyprotein [Theobroma cacao]              95   4e-17
emb|CAN68039.1| hypothetical protein VITISV_018924 [Vitis vinifera]    94   5e-17
emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]    94   6e-17
gb|EMJ28586.1| hypothetical protein PRUPE_ppb016975mg [Prunus pe...    94   8e-17
gb|EOY16714.1| Gag protease polyprotein [Theobroma cacao]              93   1e-16
gb|EOX99639.1| Gag protease polyprotein [Theobroma cacao]              93   1e-16
gb|EOY19679.1| Gag protease polyprotein [Theobroma cacao]              91   4e-16

>gb|EOY03692.1| Gag protease polyprotein [Theobroma cacao]
          Length = 689

 Score =  108 bits (269), Expect = 3e-21
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 24/283 (8%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL LKQGN +V EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 142 EFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETHFNKLMLYVPDLVKSEQDQASYFEEG 201

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-NFQYNK------------KRQGD 526
           LR  IR R+T++  E + ++   A+RAEKL  E++    ++ K            KR  D
Sbjct: 202 LRNEIRERMTVTGREPHKEVVQMALRAEKLATENRTIRTEFAKRRNPGMSSSQLVKRGKD 261

Query: 525 ETGGFKNKKEFTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGECRL 346
                     F  S +                              C +CG  H G CR 
Sbjct: 262 SAISGSTTSVFVTSPRPPFPPSQQRPSRFSRSAMTGSRKSFGGSDRCKNCGNYHSGLCRG 321

Query: 345 LTGKCFRCGEPGHIVRNCPKPREENTVE---------QXXXXXXXXXXXXXXXXXXXXXG 193
            T +CF+CG+ GHI  NCP+     TV          Q                      
Sbjct: 322 PT-RCFQCGQTGHIRSNCPRLGRATTVASSSPVHTDMQRRDSSGLPLRQGVAIRSGVESN 380

Query: 192 ISADESQGSRQQTQARVFAITKEDAKATPTVITG--QNLDKEA 70
             A      + +T  RVFA+T+++A+  P  +TG     DK+A
Sbjct: 381 TPAHPPSRPQTRTSTRVFAVTEDEARVRPGAVTGTMSLFDKDA 423


>emb|CAN72584.1| hypothetical protein VITISV_001910 [Vitis vinifera]
          Length = 279

 Score =  107 bits (266), Expect = 7e-21
 Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
 Frame = -3

Query: 843 FHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAGL 664
           F+  YLP+  R QK  EF+ L+QG+ +VA+YE  F +LS +A  +IA E+KK  +F+ GL
Sbjct: 55  FYKKYLPDNVRRQKVGEFVRLEQGDITVAQYEAKFTELSRFARQLIAIEEKKTLKFQDGL 114

Query: 663 RFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-NFQYNKKRQGDETGGFKNKKEFTQ 487
           +  ++N+I++  L  YS +   A+ AEK   E +Q   Q  K  + D     +  K F+ 
Sbjct: 115 KPYLKNKISILKLNVYSGVVDRALIAEKDNKELQQYREQQRKSSKSDGAHDNQEPKRFSS 174

Query: 486 STQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGE-CRLLTGKCFRCGEPG 310
                                          VTC  CGK H+ + C   +  CF CG+ G
Sbjct: 175 VESHIKGEVVQNLD-----------------VTCSICGKKHWSKPCYKESEACFDCGKHG 217

Query: 309 HIVRNCP--------KPREENTVEQXXXXXXXXXXXXXXXXXXXXXGISADESQGSRQQT 154
           HI+R+CP        KP++EN +++                               + + 
Sbjct: 218 HIIRDCPENKKFIIGKPKKENKMDK------------------------------QKPRV 247

Query: 153 QARVFAITKEDAKATPTVITG 91
           Q R+FA T +D +AT  V TG
Sbjct: 248 QGRMFATTHQDTQATSDVTTG 268


>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1515

 Score =  105 bits (262), Expect = 2e-20
 Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 24/295 (8%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL LKQGN +V EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 109 EFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELMLYVPDLVKSEQDQASYFEEG 168

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-NFQYNKKRQGDETGG--FKNKKE 496
           LR  IR R+T++  E + ++   A+RAEKL  E+++   ++ K+R    +     K  K+
Sbjct: 169 LRNEIRERMTVNGREPHKEVVQMALRAEKLAIENRRIRIEFAKRRNPGMSSSQPVKRGKD 228

Query: 495 FTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVV----------TCVHCGKNHYGECRL 346
              S                             +            C +CG  H G CR 
Sbjct: 229 SAISGSTTSVSVTSPRPPFPPSQQRPSRFSRSDMTGSGKSFGGSDRCRNCGNYHSGLCRE 288

Query: 345 LTGKCFRCGEPGHIVRNCPKPREENTVE---------QXXXXXXXXXXXXXXXXXXXXXG 193
            T +CF+CG+ GHI  NCP+      V          Q                      
Sbjct: 289 PT-RCFQCGQTGHIRSNCPRLGRATVVASSSPARTDIQRRDSSGLPPRQGVAIPSGVESN 347

Query: 192 ISADESQGSRQQTQARVFAITKEDAKATPTVITG--QNLDKEANKVD*TNRDKDF 34
             A      + +T  RVFA+T+++A+  P  +TG     DK+A  +  +  D+ +
Sbjct: 348 TPAHPPSRPQTRTSTRVFAVTEDEAQVRPGAVTGTMSLFDKDAYVLIDSGSDRSY 402


>gb|EOY20371.1| Gag protease polyprotein-like protein [Theobroma cacao]
          Length = 665

 Score =  104 bits (260), Expect = 4e-20
 Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 24/295 (8%)
 Frame = -3

Query: 846  EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
            EF   Y    ++ +K++EFL LKQGN +V EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 125  EFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELMLYVPDLVKSEQDQASYFEEG 184

Query: 666  LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-NFQYNKKRQGDETGG--FKNKKE 496
            LR  IR R+T++  E + ++   A+RAEKL  E+++   ++ K+R    +     K  K+
Sbjct: 185  LRNEIRERMTVTGREPHKEVVQMALRAEKLAIENRRIRTEFAKRRNPGMSSSQPVKRGKD 244

Query: 495  FTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVV----------TCVHCGKNHYGECRL 346
               S                            ++            C +CG  H G CR 
Sbjct: 245  SAISGSTTSVSVTSPRPPFPPSQQRPSRFSRSAMTGSGRSFGGSDRCRNCGNYHSGLCRE 304

Query: 345  LTGKCFRCGEPGHIVRNCPKPREENTVE---------QXXXXXXXXXXXXXXXXXXXXXG 193
             T +CF+CG+ GHI  NCP+      V          Q                      
Sbjct: 305  PT-RCFQCGQTGHIRSNCPRLGRATVVASSSPARTDIQRRDSSGLPPRQGVAIRSGVESN 363

Query: 192  ISADESQGSRQQTQARVFAITKEDAKATPTVITG--QNLDKEANKVD*TNRDKDF 34
              A      + +T  RVFA+T+++A+  P  +TG     DK+A  +  +  D+ +
Sbjct: 364  TPAHPPSRPQTRTSTRVFAVTEDEAQVRPGAVTGTISLFDKDAYVLIDSGSDRSY 418


>gb|EMJ28581.1| hypothetical protein PRUPE_ppb016096mg [Prunus persica]
          Length = 505

 Score =  101 bits (252), Expect = 3e-19
 Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 14/265 (5%)
 Frame = -3

Query: 843 FHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAGL 664
           F + + P  YR  K+ EFL LKQG+ SV EYE  FN++S +AP ++ATE+ +C RF+ GL
Sbjct: 46  FSEQFYPPSYRHAKKSEFLYLKQGSMSVVEYEHKFNEMSRFAPELVATEEDRCRRFDEGL 105

Query: 663 RFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQNFQYNKKRQGDETGGFKNKKEFTQS 484
              I+  +T +   +   L  A  R  +  + S    + +  R G  + G   K+  + S
Sbjct: 106 WCEIQAVVTANTYPNMRALAQAIERVSRKLSGSAGRRRRDTPRIGGPSQGPSKKRGSSSS 165

Query: 483 TQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHY------------GECRLLT 340
           +                             +TC +CG+  +            G+ +  +
Sbjct: 166 SASGEWQTG---------------------LTCFNCGQVGHMVKDCPSYTQGGGQSQSSS 204

Query: 339 GKCFRCGEPGHIVRNCPKPREENTVEQXXXXXXXXXXXXXXXXXXXXXGISADESQG--S 166
             C+ CG+ GH  R+CP   + +   Q                     G S  +S+G   
Sbjct: 205 LTCYFCGQVGHTKRSCPIILQSDAAIQRTGAQQGQAGSSNSRALSSSRGRSGRQSRGQPG 264

Query: 165 RQQTQARVFAITKEDAKATPTVITG 91
           R  TQ RVF++T+++A ATP VITG
Sbjct: 265 RSTTQGRVFSMTQQEAHATPDVITG 289


>gb|EOY26216.1| Gag protease polyprotein [Theobroma cacao]
          Length = 426

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL LKQGN +V EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 189 EFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELMLYVPDLVKSEQDQASYFEEG 248

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-------------NFQYNKKRQGD 526
           LR  IR R+T++  E + ++   A+RAEKL  E+++             ++  + KR  D
Sbjct: 249 LRNEIRERMTVTGREPHKEVVQMALRAEKLATENRRIRTEFAKRRNPGMSYSQSVKRGKD 308

Query: 525 ETGGFKNKKEFTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGECRL 346
                        S +                              C +CG  H G CR 
Sbjct: 309 SAISRSTTSISVTSPRPPFPPSQQRPSRFSRSAMTGSGKSFGGSDRCRNCGNYHSGLCRE 368

Query: 345 LTGKCFRCGEPGHIVRNCPK 286
            T +CF+CG+ GHI  NCP+
Sbjct: 369 PT-RCFQCGQTGHIRSNCPR 387


>emb|CAN81227.1| hypothetical protein VITISV_038888 [Vitis vinifera]
          Length = 1132

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 74/265 (27%), Positives = 116/265 (43%), Gaps = 10/265 (3%)
 Frame = -3

Query: 843 FHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAGL 664
           F+  Y P+  R QK  EF+ L+Q N +VA+YE  F +LS ++P +IAT+++K  +F+ GL
Sbjct: 116 FYKKYFPDSVRQQKVGEFVRLEQRNLTVAQYEAKFTELSCFSPQLIATKEEKTLKFQDGL 175

Query: 663 RFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-NFQYNKKRQGDETGGFKNKKEFTQ 487
           +  ++N+ ++  L  Y ++   A+ A+K   E  Q   Q  K  + D   G + +K+ T 
Sbjct: 176 KPYLKNKTSILKLSIYLEVVDRALIAKKDNEELHQYKEQQRKSNRNDGAHGNQARKKPTP 235

Query: 486 STQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGE-CRLLTGKCFRCGEPG 310
           S                                C  CGK H G  C       F CG+ G
Sbjct: 236 SRNQNKGKVTQNLDE-----------------ICPTCGKKHGGRPCYREIRAWFGCGKQG 278

Query: 309 HIVRNCP--------KPREENTVEQXXXXXXXXXXXXXXXXXXXXXGISADESQGSRQQT 154
           H+VR+CP        KP+EEN  ++                               + + 
Sbjct: 279 HMVRDCPENKKFVFGKPKEENKEDR------------------------------QKPRA 308

Query: 153 QARVFAITKEDAKATPTVITGQNLD 79
           Q RVF++T  DA+AT  V+ G  +D
Sbjct: 309 QGRVFSMTHRDAQATSDVVAGMPID 333


>gb|EOY31906.1| Gag protease polyprotein [Theobroma cacao]
          Length = 389

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL LKQGN +V EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 189 EFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELMLYVPDLVKSEQDQASYFEEG 248

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-NFQYNKKRQGDETGG--FKNKKE 496
           LR  IR R+T+   E + ++   A+RAEKL  E+++   ++ K+R    +     K  K+
Sbjct: 249 LRNEIRERMTVIGREPHKEVVQMALRAEKLATENRRIRTEFAKRRNPGMSSSQPVKRGKD 308

Query: 495 FTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVV----------TCVHCGKNHYGECRL 346
              S                            +++           C +CG  H G CR 
Sbjct: 309 SATSGSTTSVSVTSPRPPFPPSQQRPSRFSRSAMIGSGKSLGGSDRCRNCGNYHSGLCRG 368

Query: 345 LTGKCFRCGEPGHIVRNCPK 286
            T +CF+CG+ GHI  NCP+
Sbjct: 369 PT-RCFQCGQTGHIRSNCPQ 387


>gb|EOY08512.1| Gag protease polyprotein [Theobroma cacao]
          Length = 404

 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL LKQGN +V EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 189 EFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELMLYVPDLVKSEQDQASYFEEG 248

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ--------------NFQYNKKRQG 529
           LR  IR R+T+   E + ++   A+RAEKL  E+++              + Q  K+ + 
Sbjct: 249 LRNEIRERMTVIGREPHKEVVQMALRAEKLATENRRIRTKFAKRRNLGMSSSQPVKRGKD 308

Query: 528 DETGGFKNKKEFTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGECR 349
             T G       T S +                              C +CG  H G CR
Sbjct: 309 SATSGSTTSISVT-SPRPPFPPSQQRPSRFSRSAMTGSGKSLGGFDRCRNCGNYHSGLCR 367

Query: 348 LLTGKCFRCGEPGHIVRNCPK 286
             T +CF+CG+ GHI  NCP+
Sbjct: 368 GPT-RCFQCGQTGHIRSNCPQ 387


>gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao]
          Length = 809

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 24/275 (8%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL LKQGN +V EYE  FN+L  Y P+++ +E+ + + FE G
Sbjct: 164 EFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYETRFNELMLYVPNLVKSEQDQASYFEEG 223

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ--------------NFQYNKKRQG 529
           LR  IR R+T+   E + ++   A+RAEKL  E+++              + Q  K+ + 
Sbjct: 224 LRNEIRERMTVIGREPHKEVVQMALRAEKLATENRRIRTEFAKRRNPGMSSSQSVKRGKD 283

Query: 528 DETGGFKNKKEFTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGECR 349
             T G       T S +                              C + G  H G CR
Sbjct: 284 SATSGSTTSVSVT-SPRPPFPPSQQRPSRFSRSAMTGSGKSLGGSDRCRNYGNYHSGLCR 342

Query: 348 LLTGKCFRCGEPGHIVRNCPK----------PREENTVEQXXXXXXXXXXXXXXXXXXXX 199
             T +CF+CG+ GHI  NCP+          P     +++                    
Sbjct: 343 GPT-RCFQCGQTGHIRSNCPQLGRATVAASSPPARTDIQRRDSSGLPPRQGGAIRSGVES 401

Query: 198 XGISADESQGSRQQTQARVFAITKEDAKATPTVIT 94
              S   S+  + +T  RVFA+T+++A   P  +T
Sbjct: 402 NTPSHPPSR-PQTRTATRVFAVTEDEALVRPGAVT 435


>gb|EOY26650.1| Gag protease polyprotein [Theobroma cacao]
          Length = 467

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL L+QGN ++ EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 196 EFDGQYYTYFHQKEKKREFLSLQQGNLTIEEYEARFNELMSYVPDLVKSEQDQASYFEEG 255

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-NFQYNKKRQGDETGG---FKNKK 499
           LR  IR R+T++  E + ++   A+RAEKL  E+++   ++ KKR  + +      + K 
Sbjct: 256 LRNEIRERMTVTGREPHKEVVQMALRAEKLTNENRRMRAEFAKKRNPNVSSSQLPKRGKD 315

Query: 498 EFTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVT----------CVHCGKNHYGECR 349
            F   +                              T          C  CG+ H GEC 
Sbjct: 316 TFASESTVSVPVISPRPPLSQLQQRPPRFNRSGMSSTSEKSFGGLNKCEKCGRYHVGECW 375

Query: 348 LLTGKCFRCGEPGHIVRNCPK 286
            +  +CF C +PGHI  +CP+
Sbjct: 376 GI--RCFHCDQPGHIRSDCPQ 394


>gb|EOY26606.1| Gag protease polyprotein [Theobroma cacao]
          Length = 669

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF+  Y    ++ +K++EFL L+QGN ++ EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 226 EFNGQYYTYFHQKEKKREFLSLQQGNLTIEEYEARFNELMSYVPDLVKSEQDQASYFEEG 285

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQNFQYNKKRQGDETGGF----KNKK 499
           LR  IR R+T++  E + ++   A+RAEKL  E+++      KR+           + K 
Sbjct: 286 LRNEIRERMTVTGREPHKEVVQMALRAEKLTNENRRKRAEFAKRRNPNVSSSQLPKRGKD 345

Query: 498 EFTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVT----------CVHCGKNHYGECR 349
            F   +                              T          C  CG+ H GEC 
Sbjct: 346 TFASESTVSVPVISPRPPLSQLQQRPPRFNRSGMSSTSEKSFGGLNKCEKCGRYHVGECW 405

Query: 348 LLTGKCFRCGEPGHIVRNCPK 286
            +  +CF C +PGHI  +CP+
Sbjct: 406 GI--RCFHCDQPGHIRSDCPQ 424


>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
           gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
           kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
           Group] gi|31431495|gb|AAP53268.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1230

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 73/273 (26%), Positives = 115/273 (42%), Gaps = 19/273 (6%)
 Frame = -3

Query: 843 FHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAGL 664
           F+  Y PE  +  KEKEFLELKQGN+SVAEYE+ F++L+ +AP  + T+  K  RFE+GL
Sbjct: 150 FYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFAPEFVQTDGSKARRFESGL 209

Query: 663 RFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQNFQYNKKRQGDETGGFKNKKEFTQS 484
           R  ++ R+   +L  + ++ + A   EK     +Q  ++ + ++  +T   +N+  F  +
Sbjct: 210 RQPLKRRVEAFELTIFREVVSKAQLLEK--GYHEQRIEHGQPQKKFKTNNPQNQGRFRGN 267

Query: 483 TQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGE-CRLLTGKCFRCGEPGH 307
                                           C  C  +H    C    G+CF CGE GH
Sbjct: 268 YSGQMQRKSSENQGR----------------KCPICQGSHVPSICPNCWGRCFECGEAGH 311

Query: 306 IVRNCP-----KPREENTVEQ--------XXXXXXXXXXXXXXXXXXXXXGISADESQGS 166
               CP     K R  +T +                                + + ++G 
Sbjct: 312 TRYQCPLLQKGKNRVSSTTQPNTKVLTPVPSLYLPGPSSANNHGPNQGKPLANTNTTRGM 371

Query: 165 RQQ-----TQARVFAITKEDAKATPTVITGQNL 82
           R         ARV+ +TK  A+ + TV+TG  L
Sbjct: 372 RSNNSQGGNHARVYNLTKSTAEESNTVVTGNVL 404


>gb|EOX98886.1| Gag protease polyprotein [Theobroma cacao]
          Length = 467

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL L+QGN ++ EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 196 EFDGQYYTYFHQKEKKREFLSLQQGNLTIEEYEARFNELMSYVPDLVKSEQDQASYFEEG 255

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQNFQYNKKRQGDETGGF---KNKKE 496
           LR  IR R+T++  E + ++   A+RAEKL  E+++      KR+          K  K+
Sbjct: 256 LRNEIRERMTVTGREPHKEVVQMALRAEKLTNENRRMRAEFAKRRNPNVSSIQLPKRGKD 315

Query: 495 FTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVT-----------CVHCGKNHYGECR 349
            + S                             + +           C  CG+ H GEC 
Sbjct: 316 TSASESTVSVPVISPRPPFSQLQQRPPRFSRSGMSSTSEKSFGGLNKCEKCGRYHVGECW 375

Query: 348 LLTGKCFRCGEPGHIVRNCPK 286
            +  +CF C +PGHI  +CP+
Sbjct: 376 GI--RCFHCDQPGHIRSDCPQ 394


>emb|CAN68039.1| hypothetical protein VITISV_018924 [Vitis vinifera]
          Length = 548

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 72/262 (27%), Positives = 112/262 (42%), Gaps = 11/262 (4%)
 Frame = -3

Query: 843 FHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAGL 664
           F+  Y P+  R QK  EF+ L+QG+  VA YE  F +LS ++P +IATE++K  +F+ GL
Sbjct: 208 FYKKYFPDSVRRQKVGEFIRLEQGDMIVAHYEAKFTELSRFSPQLIATEEEKALKFQDGL 267

Query: 663 RFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQNFQYNKKRQGDE--TGGFKNKKEFT 490
           +  ++N+I++  L  YS++   A+  EK   E  Q  +  +KR   +   G  +NK +  
Sbjct: 268 KPYLKNKISILKLGVYSEVVDRALIVEKDNEELHQYREQQRKRNRSDGAHGRNQNKGKAA 327

Query: 489 QSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGE-CRLLTGKCFRCGEP 313
           Q+                                C  CGK H G  C      CF  G+ 
Sbjct: 328 QNLDG----------------------------ACPTCGKKHGGRPCYREIEACFGYGKQ 359

Query: 312 GHIVRNC--------PKPREENTVEQXXXXXXXXXXXXXXXXXXXXXGISADESQGSRQQ 157
            H++R+C         KP+EEN                              +    + +
Sbjct: 360 RHLIRDCLENRKFITGKPKEEN------------------------------KENKQKPK 389

Query: 156 TQARVFAITKEDAKATPTVITG 91
            Q RVFA+T  DA+A+  V+ G
Sbjct: 390 AQGRVFAMTHRDAQASSDVVIG 411


>emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]
          Length = 360

 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
 Frame = -3

Query: 843 FHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAGL 664
           F+  Y P+  R QK  EF+ L+QG+ +VA+YE  F +LS ++P +IATE++K  +F+  L
Sbjct: 179 FYKKYFPDSVRRQKVGEFIRLEQGDMTVAQYEAKFTELSRFSPQLIATEEEKALKFQDXL 238

Query: 663 RFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQNFQYNKKRQGDETGGFKNKKEFTQS 484
           +  ++N+ ++  L  YS+      R ++ +         N+ ++   +G  +NK +  Q+
Sbjct: 239 KPYLKNKXSILXLGXYSE-----YREQQRKRNRSDGAHGNQXQRRSTSGRNQNKGKAAQN 293

Query: 483 TQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGE-CRLLTGKCFRCGEPGH 307
                                           C  CGK H G  C   TG CF CG+ GH
Sbjct: 294 LDG----------------------------ACPTCGKKHGGRPCYRETGACFGCGKQGH 325

Query: 306 IVRNCPKPRE 277
           ++R+CP+ R+
Sbjct: 326 LIRDCPENRK 335


>gb|EMJ28586.1| hypothetical protein PRUPE_ppb016975mg [Prunus persica]
          Length = 650

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 75/300 (25%), Positives = 117/300 (39%), Gaps = 49/300 (16%)
 Frame = -3

Query: 843  FHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAGL 664
            F D + P  Y+  K+ EFL LKQG+ SV EYE  FN+LS +AP ++ATE+ +C RFE GL
Sbjct: 153  FSDPFYPPSYKQAKKSEFLYLKQGSMSVVEYEHKFNELSRFAPELVATEEDRCRRFEEGL 212

Query: 663  RFGIRNRITLSDLESYSKLKAAAIRAEK-------------------LEAESKQNFQYNK 541
             + I+  +T +   +   L  AA R  +                    +  SK+    + 
Sbjct: 213  WWEIQAVVTANTYPNMRALAQAAARVSRKLGGNVSRRRRDTSGIGGPSQGPSKRGGSSSS 272

Query: 540  KRQGDETGGFKNKKEFTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHY 361
               G  +GG   +   + S +                          + +TC HCG+  +
Sbjct: 273  SASGGWSGG---RGSSSSSGRSGSRSAWTQYSGPQSAASTARAPSRYTGLTCFHCGQVGH 329

Query: 360  ------------GECRLLTGKCFRCGEPGHIVRNCPKPREENTVEQXXXXXXXXXXXXXX 217
                        G  +  +  C+ CG+ GH  R+CP   +   + Q              
Sbjct: 330  IAKDCPSYTQGGGPSQSSSLTCYFCGQVGHTKRSCPIILQNEAINQGTGAQQGQGILGQN 389

Query: 216  XXXXXXXGISADES------------------QGSRQQTQARVFAITKEDAKATPTVITG 91
                     +A  S                  +  R  TQA VF++++++A ATP VITG
Sbjct: 390  QNQGGVSSSAAGSSSSRASSSSRGRCGRQSRGEPGRSTTQAHVFSMSQQEAYATPDVITG 449


>gb|EOY16714.1| Gag protease polyprotein [Theobroma cacao]
          Length = 447

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL LKQGN +V EYE  FN+L  Y P ++ TE+ + N FE G
Sbjct: 176 EFDSQYYTHFHKKEKKREFLSLKQGNLTVEEYETQFNELLSYVPDLVRTEQDQANYFEEG 235

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQNFQYNKKRQG---DETGGFKNKKE 496
           LR  IR R+T++  E + ++   A+RAEKL  E+++      KR+      +   K  K 
Sbjct: 236 LRNEIRERMTVTGREPHKEVVQMALRAEKLANENRRMRAELAKRKNLNMSFSQPLKRSKG 295

Query: 495 FTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVT----------CVHCGKNHYGECRL 346
              S                            +V T          C  CG+ H G C  
Sbjct: 296 SFDSRSAPSVSVTSSRPSFSQMQQRLPRFSGSAVTTSEKSFGGFDRCRECGRFHGGVC-W 354

Query: 345 LTGKCFRCGEPGHIVRNCPK 286
              +CF CG+  H   NCP+
Sbjct: 355 GPLRCFHCGQMSHFRTNCPQ 374


>gb|EOX99639.1| Gag protease polyprotein [Theobroma cacao]
          Length = 413

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           E    Y    ++ +K++EFL LKQG+ ++ EYE  FN+L  Y P ++ TE+ +   FE G
Sbjct: 172 ELDGQYYTHFHQKEKKREFLSLKQGSSTIEEYEARFNELMSYVPDLVKTEQDQVTYFEEG 231

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-------------NFQYNKKRQGD 526
           LR  IR+R+T++  E Y ++   A+R EKL  E+KQ             +F    K+  D
Sbjct: 232 LRNEIRDRMTVTGKEPYKEVVQMAMRVEKLAIENKQIRAEFAKMRNLSISFYQPSKKGKD 291

Query: 525 ETGGFKNKKEFTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVTCVHCGKNHYGECRL 346
            +           ST+                          S   C +C K H G CR 
Sbjct: 292 LSTSGSTTAILVASTRPPSQQSQQRPSRFSRSATSAPGKSFKSFDRCRNCKKVHPGPCRE 351

Query: 345 LTGKCFRCGEPGHIVRNCPK 286
              +CF+C + GHI   CP+
Sbjct: 352 PV-RCFQCEQQGHIRSACPQ 370


>gb|EOY19679.1| Gag protease polyprotein [Theobroma cacao]
          Length = 474

 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
 Frame = -3

Query: 846 EFHDAYLPEVYRDQKEKEFLELKQGNRSVAEYEVLFNQLSHYAPHMIATEKKKCNRFEAG 667
           EF   Y    ++ +K++EFL L+QGN ++ EYE  FN+L  Y P ++ +E+ + + FE G
Sbjct: 202 EFDGQYYTYFHQKEKKREFLSLQQGNLTIEEYEARFNELMSYVPDLVKSEQDQASYFEEG 261

Query: 666 LRFGIRNRITLSDLESYSKLKAAAIRAEKLEAESKQ-NFQYNKKRQGDETGG---FKNKK 499
           LR  IR R+T++  E + ++   A+RAEKL  E+++   ++ K+R  + +      + K 
Sbjct: 262 LRNEIRERMTVTGREPHKEVVQMALRAEKLTNENRRMRAEFAKRRNPNVSSSQLPKRGKD 321

Query: 498 EFTQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXSVVT----------CVHCGKNHYGECR 349
            F                                  T          C  CG+ H GEC 
Sbjct: 322 TFASENTVSVPVISPRPPLSQLQQRPPRFNRSGMSSTSEKSFGGLNKCEKCGRYHVGECW 381

Query: 348 LLTGKCFRCGEPGHIVRNCPK 286
            +  +CF C + GHI  +CP+
Sbjct: 382 GI--RCFHCDQSGHIRSDCPQ 400