BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00017817
         (2141 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   479   e-132
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   472   e-130
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   438   e-120
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               436   e-119
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   434   e-119
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   431   e-118
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   422   e-115
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       422   e-115
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   421   e-115
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           421   e-115
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   413   e-112
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                412   e-112
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               407   e-110
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   407   e-110
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   394   e-106
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   393   e-106
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   392   e-106
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   391   e-106
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...   390   e-105
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             382   e-103

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  479 bits (1233), Expect = e-132
 Identities = 250/650 (38%), Positives = 384/650 (59%), Gaps = 8/650 (1%)
 Frame = +1

Query: 10   QEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIA 189
            QEI  AL +I D K+PG DG++S FFKKSW ++ +++   + +FF +G + K ++ T + 
Sbjct: 444  QEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVT 503

Query: 190  LIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENI 369
            LIPK D A    DYRPI+CC+ +YKII+KIL  RL +V+  ++D AQ  FI  R+I +NI
Sbjct: 504  LIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNI 563

Query: 370  HLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTS 549
             L  EL+R YNR+  SPRC IK+D+RKA+DSV W FL+ ML+ LGFP  F  WI+ CV +
Sbjct: 564  LLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKT 623

Query: 550  PSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCGA 726
             S+SI +NG     F  +KGLRQGDPLSP+LF + +EYLSR +    +   FNFHP C  
Sbjct: 624  VSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCER 683

Query: 727  LRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEA 906
            +++THL++ADDL++ +R D +S+  +M     F   SGL  +I KS IY   V   + E 
Sbjct: 684  IKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQ 743

Query: 907  ILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVR 1086
            +    Q+  G++PFRYLG+PLA+++L     +PL++KI++   GW +  LSYAGR +LV+
Sbjct: 744  LADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVK 803

Query: 1087 SVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLW-----DNGKVCIAWDTLCLPKNEGGLG 1251
            ++L  ++ +W  +FP+P ++   +   CR++LW      + K  +AWD L  PK+ GGL 
Sbjct: 804  TILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLN 863

Query: 1252 LRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNT 1431
            + ++  WN+A + K LW I  ++D LW RWV+  Y++ Q + +  V ++ S +++ I  +
Sbjct: 864  VTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFES 923

Query: 1432 RDQLIAECGGSVQLAEAKLTYWRDGLPGTGSRDAYHFFRPKGTIVPWANVVWGRSIPPKH 1611
            R +L+   GG     EA   +    +  T     Y   +     V W  ++      PK 
Sbjct: 924  R-ELLTRTGG----WEAVSNHMNFSIKKT-----YKLLQEDYENVVWKRLICNNKATPKS 973

Query: 1612 SFILWLCTHGRVLTKDRLGFMELDVN--CVYCSQHRETAAHLFFECPFSKQVWTQIRSWM 1785
             FILWL    R+ T +R+     DV+  C  C    ET  HLFF C +SK++W ++  ++
Sbjct: 974  QFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHLFFNCIYSKEIWGKVLLYL 1033

Query: 1786 GITRQMSTLRSALKWMKKEAKGSGWRAKGQKAGLASTVYHLWNARNRLIF 1935
             +  Q +  ++  +   K+A+ +  R K        +VY +W  RN  +F
Sbjct: 1034 NLQPQ-ADAQAKKELAIKKARSTKDRNKLYVMMFTESVYAIWLLRNAKVF 1082


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  472 bits (1214), Expect = e-130
 Identities = 241/671 (35%), Positives = 384/671 (57%), Gaps = 12/671 (1%)
 Frame = +1

Query: 1    ILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNT 180
            +   EI +AL  I ++K+PG DG+++ FFKKSW  + +++   +QEFF +  + + ++  
Sbjct: 438  VASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCI 497

Query: 181  VIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIV 360
            V+ L+PK  +A  V ++RPI+CC VIYKII+K+L  R+  ++  +++ AQ  FI GR+I 
Sbjct: 498  VVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIA 557

Query: 361  ENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQC 540
            +NI L  EL+R Y RK  SPRC +K+D+RKA+DSV WSFL+ +L   GFP  F  WI++C
Sbjct: 558  DNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMEC 617

Query: 541  VTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPM 717
            V++ S+S+ +NG     F+  KGLRQGDP+SP+LF +C+EYLSR L + K    FNFHP 
Sbjct: 618  VSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPK 677

Query: 718  CGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGD 897
            C  L ITHL++ADDL++  R D +S+  +      F   SGL  +  KSNIY   VD+  
Sbjct: 678  CERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDET 737

Query: 898  TEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 1077
               +     +  G +PFRYLG+PL +++L     +PL+  I++    W +  LSYAGR +
Sbjct: 738  ARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQ 797

Query: 1078 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLW-----DNGKVCIAWDTLCLPKNEG 1242
            L++S+L  ++ +W  +FP+  +V   + ++CR++LW     +  K  +AW T+  PK+ G
Sbjct: 798  LIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRG 857

Query: 1243 GLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNI 1422
            G  + ++K WN+A + K LW I  ++D LW RW+H  Y++ Q +   N+ N  + +++ I
Sbjct: 858  GWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKI 917

Query: 1423 LNTRDQLIAECGGSVQLAEAKLTYWRDGLPGT--GSRDAYHFFRPKGTIVPWANVVWGRS 1596
            +  RD L            + +  W +   G     + AY      G  V W  ++    
Sbjct: 918  VKARDHL------------SNIGDWDEICIGDKFSMKKAYKKISENGERVRWRRLICNNY 965

Query: 1597 IPPKHSFILWLCTHGRVLTKDRLG--FMELDVNCVYCSQHRETAAHLFFECPFSKQVWTQ 1770
              PK  FILW+  H R+ T DR+    ++ D+N   C    ET  HLFF C +S  VW++
Sbjct: 966  ATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRNDGETIQHLFFSCSYSAGVWSK 1025

Query: 1771 IRSWMGITRQMSTLRSALKWMKKEAKGSGWRAKGQKAGLAST--VYHLWNARNRLIFEKE 1944
            I   M       + +  +  +  +A+    + KG+   +  T  VY +W  RN+  F  E
Sbjct: 1026 ICYIMRFPNSGVSHQEIISSVCGQAR----KKKGKLIVMLYTEFVYAIWKQRNKRTFTGE 1081

Query: 1945 TPVVDKIVKQI 1977
                ++++++I
Sbjct: 1082 NKDENEVLRKI 1092


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  438 bits (1126), Expect = e-120
 Identities = 263/749 (35%), Positives = 381/749 (50%), Gaps = 86/749 (11%)
 Frame = +1

Query: 1    ILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNT 180
            + + +IK   F +   KSPGPDGY+S FFKK+WSIVG  +  AVQEFF SG LL Q ++T
Sbjct: 446  VSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNST 505

Query: 181  VIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIV 360
             + ++PK  NA  + ++RPISCCN IYK+I+K+LA RL ++L   I  +Q AF+KGR + 
Sbjct: 506  AVTMVPKKPNADRITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLT 565

Query: 361  ENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQC 540
            EN+ L  EL++ + +   S R  +K+DLRKAFDSV W F+ E L+    PP F NWI QC
Sbjct: 566  ENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQC 625

Query: 541  VTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTK-TQSHFNFHPM 717
            +TS SFSI+++G L G+FKG KGLRQGDPLSP LFVI +E LSRLL+ K +     +HP 
Sbjct: 626  ITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPK 685

Query: 718  CGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGD 897
               +RI+ L +ADDLM+   G  +S++ +   L  F   SGL MN  KS +Y A +++ D
Sbjct: 686  ASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTD 745

Query: 898  TEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 1077
             E  L +     GT PFRYLG+PL   +L+   Y  L++KI++  N W++ TLS+AGR +
Sbjct: 746  KEDTL-AFGFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQ 804

Query: 1078 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEG 1242
            L+ SV+     FW+S F +P      I Q+C R+LW N     G + ++W   CLPK EG
Sbjct: 805  LISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEG 864

Query: 1243 GLGLRDLKT-----------------------WNQA--LLTKNLWNI------------- 1308
            GLGLR+  T                       WN A  L   N WN              
Sbjct: 865  GLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWKAI 924

Query: 1309 ----------------HGQKDTLWY-RW-------------------VHHTYL--RAQTV 1374
                            +GQ  + WY  W                   +H + +   A + 
Sbjct: 925  LGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLGPLIEAIGASGPQLTGIHESAVVTEASSS 984

Query: 1375 WDWNVKNSDSPLIKNILNTRDQLIAECGGSVQLAEAKLTYWRDGLPGTG--SRDAYHFFR 1548
              W +  S      ++ N R  L+     S    E   T++ +G   T   S+  +   R
Sbjct: 985  TGW-ILPSARTRNASLANLRSTLLNSPAPSGDRGEDTYTWYIEGSSSTSFSSKLTWECLR 1043

Query: 1549 PKGTIVPWANVVWGRSIPPKHSFILWLCTHGRVLTKDRLGFMELDVN--CVYCSQHRETA 1722
             + T   WA  VW +   PK++F  W+    R+  + R      +    C  C +  ET 
Sbjct: 1044 QRDTTKLWAAAVWYKGCIPKYAFNFWVAHLNRLPVRARTTHWSTNRPSLCCVCQRETETR 1103

Query: 1723 AHLFFECPFSKQVWTQIRSWMGITRQMSTLRSALKWMKKEAKGSGWRAKGQKAGLASTVY 1902
             HLF  C     +W Q+ +  G ++     +  ++WM    +GS +    +K  + + ++
Sbjct: 1104 DHLFIHCTLGSLIWQQVLARFGRSQMFREWKDIIEWMLSN-QGS-FSGTLKKLAVQTAIF 1161

Query: 1903 HLWNARNRLIFEKETPVVDKIVKQIKTQV 1989
            H+W  RN  +    +     I KQI   +
Sbjct: 1162 HIWKERNSRLHSAMSASHTAIFKQIDRSI 1190


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  436 bits (1122), Expect = e-119
 Identities = 264/755 (34%), Positives = 390/755 (51%), Gaps = 92/755 (12%)
 Frame = +1

Query: 1    ILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNT 180
            +  +EIK  LF++  +KSPGPDGY+S F+K +W I+G++ T  VQ FF  G L K +++ 
Sbjct: 100  VSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSI 159

Query: 181  VIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIV 360
            ++ALIPK   A  + DYRPISCCNV+YK+I+KI+A RL  +L   I   Q AF+K R ++
Sbjct: 160  ILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLI 219

Query: 361  ENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQC 540
            EN+ L  EL++ Y++   S RC IKID+ KAFDSV WSFL   L  + F PTF +WI  C
Sbjct: 220  ENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLC 279

Query: 541  VTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPM 717
            +T+ SFS+ +NG L G+F+ ++GLRQG  LSPYLFVIC++ LS++L K      F FHP 
Sbjct: 280  ITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPK 339

Query: 718  CGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGD 897
            C  L +THL +ADDLM+LS G   S++ +++   +F  +SGL +++ KS +YMA V    
Sbjct: 340  CQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPII 399

Query: 898  TEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 1077
             + I        G +P RYLG+PL  +RL    Y PLL +I   I  W+    S+AGR  
Sbjct: 400  KQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFN 459

Query: 1078 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEG 1242
            L++SVL  +  FW++ F +P +   +I +LC  +LW        K  I+WD +C PK EG
Sbjct: 460  LIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEG 519

Query: 1243 GLGLRDLKTWNQA-------------------------LLTKNLWNI------------- 1308
            GLGLR+LK  N                           +  K++W++             
Sbjct: 520  GLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRK 579

Query: 1309 -----------------HGQKDTLWY-RWVHHTYL---------------RAQTVWDWNV 1389
                             +G+  + WY  W  H  L               R  +V D   
Sbjct: 580  ILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRLIDTVGDKGTIDLGIPREASVADAWT 639

Query: 1390 KNSDSPLIKNILNTRDQLIAECGGSVQLAEAKLTY-WRDG----LPGTGSRDAYHFFRPK 1554
            + S      ++LN  ++++A     +  ++A+ T  WR       P   +RD +H  +  
Sbjct: 640  RRSRRRHRTSLLNEIEEMMAY--QRIHHSDAEDTVLWRGKNDVFKPHFSTRDTWHLIKAT 697

Query: 1555 GTIVPWANVVWGRSIPPKHSFILWLCTHGRVLTKDRL----GFMELDVNCVYCSQHRETA 1722
             + V W   VW R   PK++   WL  H R+ T DR+        +  NCV C+ + +T 
Sbjct: 698  SSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVLCTNNSKTL 757

Query: 1723 AHLFFECPFSKQVWTQIRSWMGITRQMSTLRSALKWMKKEAKGSGWRAKG--QKAGLAST 1896
             HLFF C ++  VW  +   +  TR  +     L  +    +    R +G   +    +T
Sbjct: 758  EHLFFSCSYASTVWAALAKGIWKTRYSTRWSHLLTHISTHFQD---RVEGFLTRYIFQAT 814

Query: 1897 VYHLWNARN--RLIFEKETP--VVDKIVKQIKTQV 1989
            +YH+W  RN  R      TP  V+  I KQ + Q+
Sbjct: 815  IYHVWRERNGRRHDAAPNTPATVIGWIDKQTRNQI 849


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  434 bits (1116), Expect = e-119
 Identities = 245/674 (36%), Positives = 368/674 (54%), Gaps = 12/674 (1%)
 Frame = +1

Query: 1    ILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNT 180
            I + E+    F+I   KSPGPDGY+  FF+++WS++G++VT A++ FFT G L K L++T
Sbjct: 719  ITEAEVMKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNST 778

Query: 181  VIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIV 360
            ++ALIPK   A  + DYRPISCCNV+YK I+K+LA RL  +L   I   Q AFI  R ++
Sbjct: 779  ILALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLM 838

Query: 361  ENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQC 540
            EN+ L  EL++ Y++   SPRC +KIDL KAFDSV W FL   L  L  P  F +WI  C
Sbjct: 839  ENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLC 898

Query: 541  VTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPM 717
            +++ SFS+ +N           GLRQG  LSPYLFVIC+  LS +L K   +  F +HP 
Sbjct: 899  ISTASFSVQVN-----------GLRQGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPR 947

Query: 718  CGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGD 897
            C  + +THL +ADD+M+ S G   S++ ++    DF A SGL++++ KS ++MA++    
Sbjct: 948  CRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSET 1007

Query: 898  TEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 1077
              +IL       G++P RYLG+PL  +R+ +    PLL KI S I+ W +  LSYAGR +
Sbjct: 1008 CASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQ 1067

Query: 1078 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEG 1242
            L+ SV+  +  FW+S F +P     +I Q+   +LW        K  +AW  +C PK+EG
Sbjct: 1068 LLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPKSEG 1127

Query: 1243 GLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLR--AQTVWDWNVKNSDSPLIK 1416
            GLGLR L   N+    K +W +   K +LW  W+ +  +R  A+ +     ++    ++ 
Sbjct: 1128 GLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIRTVAEALSSHRRRSHRDDILN 1187

Query: 1417 NILNTRDQLIAECGGSVQLAEAKLTYWRDG--LPGTGSRDAYHFFRPKGTIVPWANVVWG 1590
            +I    ++L+  C G     +  L     G       S + +H  R +G +  W   +W 
Sbjct: 1188 DIEEELEKLL--CRGICTEQDRSLCRSIGGQFKAKFFSPEIWHQIREQGLVKQWHKAIWF 1245

Query: 1591 RSIPPKHSFILWLCTHGRVLTKDRLGFMELDVN--CVYCSQHRETAAHLFFECPFSKQVW 1764
                PK +FI WL  H R+ T D++      ++  CV C+   E+  HLFF C FS  +W
Sbjct: 1246 SGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAESRDHLFFSCNFSSHIW 1305

Query: 1765 TQIRSWMGITRQMSTLRSALKWMKKEAKGSGWRAKGQKAGLASTVYHLWNARNRLIFEKE 1944
             ++   + + R  +T   AL  +      SG +    +    +T++ LW  RN+      
Sbjct: 1306 DRLTRRLLLCR-YTTNFPALLLLLSGQDFSGTKRFLLRYVFQATIHTLWRERNKRRHGDL 1364

Query: 1945 TPVVDKIVKQIKTQ 1986
                D I+K I  Q
Sbjct: 1365 PIPSDHIIKFIDRQ 1378


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  431 bits (1109), Expect = e-118
 Identities = 246/713 (34%), Positives = 370/713 (51%), Gaps = 44/713 (6%)
 Frame = +1

Query: 13   EIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNA-VQEFFTSGSLLKQLSNTVIA 189
            +I+   F+++  KSPGPDG++  FF+K+W ++G+ V  A V+EFF+ GSLL +L++T+I 
Sbjct: 277  DIRAVFFSMNPNKSPGPDGFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLLMELNSTIIT 336

Query: 190  LIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENI 369
            L+PK  N  T++D+RPISCCN  YKII K+LA RL   L+ I+  +Q  FI GR I +NI
Sbjct: 337  LVPKVANPTTMSDFRPISCCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNI 396

Query: 370  HLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTS 549
             L QE++  Y++    PRCT  +D+ KA D+V W F+   L+    P T   WI  C++S
Sbjct: 397  LLAQEIICDYHKADGQPRCTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISS 456

Query: 550  PSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQSH--FNFHPMCG 723
              FS+ +NG L GFF   +GLRQGDPLSPYLFVI +E LS  ++ +      F +H  C 
Sbjct: 457  AKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCD 516

Query: 724  ALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTE 903
             L ++HL +ADDL++   GD  SV+ L D  ++F + S L  N+ +S I++A VD   ++
Sbjct: 517  QLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSD 576

Query: 904  AILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELV 1083
            ++L  T  + GT P RYLGIPL   +L++    PLL++I + I  W +  LS+AGR +L+
Sbjct: 577  SVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLI 636

Query: 1084 RSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWD---NGKVC--IAWDTLCLPKNEGGL 1248
            +SVL  ++ +W S   +P +V   I +  R +LW    +G+    +AW  +CLPK EGGL
Sbjct: 637  QSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGL 696

Query: 1249 GLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWD--------WNVK---- 1392
            G++DL  WN+AL+  ++WN+       W  WV    L+  + W+        WN +    
Sbjct: 697  GIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNWRKLLK 756

Query: 1393 -----------------------NSDSPLIKNILNTRDQLIAECGGSVQLAEAKLTYWRD 1503
                                   ++  PL    L     +I E G S     A LT   +
Sbjct: 757  IRELCCSFFVNIIGDGRATSLWFDNWHPLGPLTLRWSSNIIGESGLS---KSAMLT--PN 811

Query: 1504 GLPGTGSRDAYHFFRPKGTIVPWANVVWGRSIPPKHSFILWLCTHGRVLTKDRLGFMELD 1683
            G   T S  A++  RP   IVPW  +VW         F+                     
Sbjct: 812  GFYSTSS--AWNTLRPSRFIVPWYRLVW---------FV--------------------- 839

Query: 1684 VNCVYCSQHRETAAHLFFECPFSKQVWTQIRSWMGITRQMSTLRSALKWMKKEAKGSGWR 1863
                      ET  HLFF+C +S  +WT + S   +++ +      + W+    KG+   
Sbjct: 840  ---------AETHNHLFFDCAYSFGIWTHVLSKCDVSKPLLPWSDFIFWVATNWKGNSLP 890

Query: 1864 AKGQKAGLASTVYHLWNARNRLIFEKETPVVDKIVKQIKTQVYMCMFT-LFPH 2019
                K  L + VY +W  RN   F  E+     + K I   + +C+ +   PH
Sbjct: 891  VVILKLALQAVVYAIWRERNNRRFRNESLPPAVVFKGIVESIRLCLLSWKIPH 943


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  422 bits (1084), Expect = e-115
 Identities = 216/512 (42%), Positives = 310/512 (60%), Gaps = 8/512 (1%)
 Frame = +1

Query: 10   QEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIA 189
            +EI+  LF +  +KSPGPDGY+S FFK +W I+G++ T AVQ FFT G L K +++T++A
Sbjct: 456  EEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILA 515

Query: 190  LIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENI 369
            LIPK   A  + DYRPISCCNV+YK+I+KI+A RL  VL   I G Q AF+K R ++EN+
Sbjct: 516  LIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENL 575

Query: 370  HLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTS 549
             L  EL++ Y++   S RC IKID+ KAFDSV W FL  +   LGFP  F +WI  C+T+
Sbjct: 576  LLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITT 635

Query: 550  PSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGA 726
             SFS+ +NG L G+F+  +GLRQG  LSPYLFVIC++ LS++L K     HF +HP C  
Sbjct: 636  ASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKT 695

Query: 727  LRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEA 906
            + +THL +ADDLM+LS G   S++ ++    +F   SGL +++ KS +Y+A +       
Sbjct: 696  MGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNE 755

Query: 907  ILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVR 1086
            +      + G +P RYLG+PL  +RL      PLL ++   I  W+S  LSYAGR  L+ 
Sbjct: 756  VADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLIS 815

Query: 1087 SVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLW-----DNGKVCIAWDTLCLPKNEGGLG 1251
            SVL  +  FW++ F +P +   ++ ++C  +LW     ++ K  I+W  +C PK+EGGLG
Sbjct: 816  SVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLG 875

Query: 1252 LRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLI-KNILN 1428
            LR LK  N     K +W I    ++LW +WV    LR  + W+     S    I K +L 
Sbjct: 876  LRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLK 935

Query: 1429 TRDQLIAECGGSVQLAEAKLT-YWRDGLPGTG 1521
             R+  +A+    V++   K T +W D     G
Sbjct: 936  YRE--VAKTLSKVEVGNGKQTSFWYDNWSDLG 965



 Score = 75.9 bits (185), Expect = 7e-11
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
 Frame = +1

Query: 1522 SRDAYHFFRPKGTIVPWANVVWGRSIPPKHSFILWLCTHGRVLTKDRL--GFMELDVNCV 1695
            +RD +H  R     VPW  V+W     PK+SF  WL  HGR+ T DR+      +  +C+
Sbjct: 1040 TRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCI 1099

Query: 1696 YCSQHRETAAHLFFECPFSKQVWTQIRSWMGITRQMSTLRSALKWM-KKEAKGSGWRAKG 1872
            +C    ET  HLFF C F+  +W  +   +  T+  S  +S ++ +   +     W  + 
Sbjct: 1100 FCQGTLETRDHLFFTCSFTSVIWVDLARGIFKTQYTSHWQSIIEAITNSQHHRVEWFLR- 1158

Query: 1873 QKAGLASTVYHLWNARNRLIFEKETPVVDKIV----KQIKTQV 1989
             +    +T+Y +W  RN     +      ++V    KQI+ Q+
Sbjct: 1159 -RYVFQATIYIVWRERNGRRHGEPPNTASQLVGWIDKQIRNQL 1200


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  422 bits (1084), Expect = e-115
 Identities = 225/531 (42%), Positives = 322/531 (60%), Gaps = 10/531 (1%)
 Frame = +1

Query: 7    DQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVI 186
            +++I+ ALF++   KS GPDG+++ FF  SWSIVG +VT+A++EFF+SG LLKQ + T I
Sbjct: 449  NEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTI 508

Query: 187  ALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVEN 366
             LIPK  N    +D+RPISC N +YK+I ++L  RL  +L+ +I  AQ AF+ GR++ EN
Sbjct: 509  VLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAEN 568

Query: 367  IHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVT 546
            + L  +L+  YN    SPR  +K+DL+KAFDSV W F+   L  L  P  F NWI QC++
Sbjct: 569  VLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCIS 628

Query: 547  SPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQSH-FNFHPMCG 723
            +P+F++SINGG  GFFK  KGLRQGDPLSPYLFV+ +E  S LL ++ +S   ++HP   
Sbjct: 629  TPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKAS 688

Query: 724  ALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTE 903
             L I+HL++ADD+M+   G   S+  + + L DF + SGL +N  KS++Y+A +++ ++ 
Sbjct: 689  NLSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESN 748

Query: 904  AILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELV 1083
            A   +     GT+P RYLG+PL   +L++  YEPLL KI++    W +  LS+AGR +L+
Sbjct: 749  A-NAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLI 807

Query: 1084 RSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEGGL 1248
             SV+ G   FWMS F +P     +I  LC R+LW         + ++W  LCLPK+EGGL
Sbjct: 808  SSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGL 867

Query: 1249 GLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILN 1428
            GLR L  WN+ L  + +W +   KD+LW  W H  +L   + W      SDS   K +L+
Sbjct: 868  GLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLS 927

Query: 1429 TR----DQLIAECGGSVQLAEAKLTYWRDGLPGTGSRDAYHFFRPKGTIVP 1569
             R      L+ + G  +     K  YW D     G       FR  G I P
Sbjct: 928  LRPLAHQFLVCKVGNGL-----KADYWYDNWTSLGP-----LFRIIGDIGP 968



 Score = 73.2 bits (178), Expect = 4e-10
 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1513 GTGSRDAYHFFRPKGTIVPWANVVWGRSIPPKHSFILWLCTHGRVLTKDRL---GFMELD 1683
            G  +   +   RPK T+  WA+ +W +   PK++F +W+    R+LT+ RL   G ++ D
Sbjct: 1032 GFSAAKTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSD 1091

Query: 1684 VNCVYCSQHRETAAHLFFECPFSKQVWTQI-RSWMGITRQMSTLRSALKWMKKEAKGSGW 1860
              CV CS   E+  HL   C FS QVW  + R      R  S+    L W+++ +  +  
Sbjct: 1092 A-CVLCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSELLSWVRQSSPEAPP 1150

Query: 1861 RAKGQKAGLASTVYHLWNARNRLI 1932
              +  K      VY+LW  RN L+
Sbjct: 1151 LLR--KIVSQVVVYNLWRQRNNLL 1172


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  421 bits (1082), Expect = e-115
 Identities = 213/484 (44%), Positives = 303/484 (62%), Gaps = 8/484 (1%)
 Frame = +1

Query: 7    DQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVI 186
            D EIK A  ++   K+ GPDGYS  FF+ +WSI+G +V  A+ EFF SG LLKQ + T +
Sbjct: 309  DDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTL 368

Query: 187  ALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVEN 366
             LIPK+ NA T++++RPISC N +YK+I+K+L  RL  +L+ +I  +Q AF+ GR++ EN
Sbjct: 369  VLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAEN 428

Query: 367  IHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVT 546
            + L  E++  YNR   SPR  +K+DL+KAFDSV W F+   L  L  P  + NWI QC+T
Sbjct: 429  VLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCIT 488

Query: 547  SPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCG 723
            +PSF+IS+NG   GFF+  KGLRQGDPLSPYLFV+ +E  S+LL ++  S + ++HP  G
Sbjct: 489  TPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAG 548

Query: 724  ALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTE 903
             L I+HL++ADD+M+   G  +S+  + + L DF   SGL +N  KS ++ A +D  +  
Sbjct: 549  DLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER- 607

Query: 904  AILTSTQ--LTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 1077
              +TS       GT P RYLG+PL   +L++  Y PLL K+S+ +  W S  LS+AGRT+
Sbjct: 608  --ITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQ 665

Query: 1078 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLW----DNGKVC-IAWDTLCLPKNEG 1242
            L+ SV+ G+  FWMS F +P     KI  LC ++LW    D  K   ++W   CLPK+EG
Sbjct: 666  LISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEG 725

Query: 1243 GLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNI 1422
            GLG R    WN+ LL + +W +  +  +LW +W  H  L   + W  N   +D    K +
Sbjct: 726  GLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKML 785

Query: 1423 LNTR 1434
            LN R
Sbjct: 786  LNLR 789



 Score = 65.5 bits (158), Expect = 9e-08
 Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
 Frame = +1

Query: 1513 GTGSRDAYHFFRPKGTIVPWANVVWGRSIPPKHSFILWLCTHGRVLTKDRLGFMEL--DV 1686
            G  +   +   RP+  +  WA  VW +   PKH+F  W     R+ T+ RL    L    
Sbjct: 891  GFSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSA 950

Query: 1687 NCVYCSQHRETAAHLFFECPFSKQVWTQI-RSWMGITRQMSTLRSALKWMKKEAKGSGWR 1863
             C  CS   ET  HL   C FS QVW  +        R + T    L W ++    +   
Sbjct: 951  ECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQSTAAAPSL 1010

Query: 1864 AKGQKAGLASTVYHLWNARNRLI 1932
             +   A L   VY+LW  RN ++
Sbjct: 1011 LRKVVAQL--VVYNLWRQRNLVL 1031


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  421 bits (1082), Expect = e-115
 Identities = 213/484 (44%), Positives = 303/484 (62%), Gaps = 8/484 (1%)
 Frame = +1

Query: 7    DQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVI 186
            D EIK A  ++   K+ GPDGYS  FF+ +WSI+G +V  A+ EFF SG LLKQ + T +
Sbjct: 309  DDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTL 368

Query: 187  ALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVEN 366
             LIPK+ NA T++++RPISC N +YK+I+K+L  RL  +L+ +I  +Q AF+ GR++ EN
Sbjct: 369  VLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAEN 428

Query: 367  IHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVT 546
            + L  E++  YNR   SPR  +K+DL+KAFDSV W F+   L  L  P  + NWI QC+T
Sbjct: 429  VLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCIT 488

Query: 547  SPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCG 723
            +PSF+IS+NG   GFF+  KGLRQGDPLSPYLFV+ +E  S+LL ++  S + ++HP  G
Sbjct: 489  TPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAG 548

Query: 724  ALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTE 903
             L I+HL++ADD+M+   G  +S+  + + L DF   SGL +N  KS ++ A +D  +  
Sbjct: 549  DLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER- 607

Query: 904  AILTSTQ--LTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 1077
              +TS       GT P RYLG+PL   +L++  Y PLL K+S+ +  W S  LS+AGRT+
Sbjct: 608  --ITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQ 665

Query: 1078 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLW----DNGKVC-IAWDTLCLPKNEG 1242
            L+ SV+ G+  FWMS F +P     KI  LC ++LW    D  K   ++W   CLPK+EG
Sbjct: 666  LISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEG 725

Query: 1243 GLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNI 1422
            GLG R    WN+ LL + +W +  +  +LW +W  H  L   + W  N   +D    K +
Sbjct: 726  GLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKML 785

Query: 1423 LNTR 1434
            LN R
Sbjct: 786  LNLR 789



 Score = 65.5 bits (158), Expect = 9e-08
 Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
 Frame = +1

Query: 1513 GTGSRDAYHFFRPKGTIVPWANVVWGRSIPPKHSFILWLCTHGRVLTKDRLGFMEL--DV 1686
            G  +   +   RP+  +  WA  VW +   PKH+F  W     R+ T+ RL    L    
Sbjct: 891  GFSAAKTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSA 950

Query: 1687 NCVYCSQHRETAAHLFFECPFSKQVWTQI-RSWMGITRQMSTLRSALKWMKKEAKGSGWR 1863
             C  CS   ET  HL   C FS QVW  +        R + T    L W ++    +   
Sbjct: 951  ECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQSTAAAPSL 1010

Query: 1864 AKGQKAGLASTVYHLWNARNRLI 1932
             +   A L   VY+LW  RN ++
Sbjct: 1011 LRKVVAQL--VVYNLWRQRNLVL 1031


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  413 bits (1061), Expect = e-112
 Identities = 208/509 (40%), Positives = 308/509 (60%), Gaps = 8/509 (1%)
 Frame = +1

Query: 1    ILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNT 180
            +  +EI+  LF + + KSPGPDGY+S FFK +WS+ G     A+Q FF  G L K L+ T
Sbjct: 750  VTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNAT 809

Query: 181  VIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIV 360
            ++ALIPK D A  + DYRPISCCNV+YK+I+KILA RL  +L   I   Q AF+K R ++
Sbjct: 810  ILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLM 869

Query: 361  ENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQC 540
            EN+ L  EL++ Y+++  +PRC +KID+ KAFDSV W FL   LE L FP TF +WI  C
Sbjct: 870  ENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLC 929

Query: 541  VTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPM 717
            +++ +FS+ +NG L GFF   +GLRQG  LSPYLFVIC+  LS ++ +     +  +HP 
Sbjct: 930  ISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPK 989

Query: 718  CGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGD 897
            C  + +THL +ADDLM+   G   S++ +++   +F  +SGL +++ KS IY+A V   D
Sbjct: 990  CEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASD 1049

Query: 898  TEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 1077
                L+S     G +P RYLG+PL  +++    Y PL+  + + I+ W++ +LSYAGR  
Sbjct: 1050 RVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLA 1109

Query: 1078 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEG 1242
            L+ SV+  +  FWMS + +PA    +I +LC  +LW        K  IAW ++C PK EG
Sbjct: 1110 LLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEG 1169

Query: 1243 GLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNS-DSPLIKN 1419
            GLG++ L   N+    K +W +   + +LW  W+    +R  T W  N ++S  S + K 
Sbjct: 1170 GLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWMWKK 1229

Query: 1420 ILNTRDQLIAECGGSVQLAEAKLT-YWRD 1503
            +L  R+  +A+    V++     T +W D
Sbjct: 1230 LLKYRE--LAKSMHKVEVRNGSSTSFWYD 1256


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  412 bits (1060), Expect = e-112
 Identities = 209/508 (41%), Positives = 308/508 (60%), Gaps = 7/508 (1%)
 Frame = +1

Query: 1    ILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNT 180
            +  +E +  LF +   K PGPDGY+S FFK +WSI G+    A++ FF  G L K L+ T
Sbjct: 26   VTSEENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNAT 85

Query: 181  VIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIV 360
            ++ALIPK D A  + DYRPISCCNVIYK+I+KI+A RL  +L   I   Q AF++ R ++
Sbjct: 86   ILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLI 145

Query: 361  ENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQC 540
            EN+ L  EL++ Y++   SPRC +KID+ KAFDSV W FL   LE L FP  F +WI  C
Sbjct: 146  ENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLC 205

Query: 541  VTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLK-TKTQSHFNFHPM 717
            +++ +FS+ +NG L GFF  ++GLRQG  LSPYLFVIC+  LS ++       +  +HP 
Sbjct: 206  ISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPK 265

Query: 718  CGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGD 897
            C  L +THL +ADDLM+   G   SV+ +++   +F  KSGLH+++ KS +Y+A V E +
Sbjct: 266  CKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELN 325

Query: 898  TEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 1077
               IL++     G +P RYLG+PL  +++    Y PLL+K+ S I+ W++ +LSYAGR  
Sbjct: 326  RNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLA 385

Query: 1078 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEG 1242
            L+ SV+  +  FWMS + +PA    +I +LC  +LW        K  I W +LC  K EG
Sbjct: 386  LINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEG 445

Query: 1243 GLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNS-DSPLIKN 1419
            GLG++ L   N+    K +W +  ++ +LW  WV    +R  + W  N ++S  S + K 
Sbjct: 446  GLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKK 505

Query: 1420 ILNTRDQLIAECGGSVQLAEAKLTYWRD 1503
            +L  RD   + C   ++ + +  ++W D
Sbjct: 506  LLKYRDVAKSMCKVEIK-SGSSTSFWYD 532


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  407 bits (1046), Expect = e-110
 Identities = 213/505 (42%), Positives = 304/505 (60%), Gaps = 7/505 (1%)
 Frame = +1

Query: 10   QEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIA 189
            +EIK  LF++ ++KSPGPDG++S FFK+SW I+G +   A+Q FF  G L K +++T++A
Sbjct: 9    EEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILA 68

Query: 190  LIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENI 369
            LIPK   +  + DYRPISCCNV+YK+I+KILA RL  +L   I G Q +F+K R ++EN+
Sbjct: 69   LIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENV 128

Query: 370  HLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTS 549
             L  +L++ Y++   S RC IKID+ KA DSV WSFL   L  + FP  F +WI  C+T+
Sbjct: 129  LLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITT 188

Query: 550  PSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGA 726
            PSFS+ +NG L GFF+  +GLRQG  LSPYLFVIC++ LS+LL K        +HP C  
Sbjct: 189  PSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKR 248

Query: 727  LRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEA 906
            + +THL +ADDLM+L+ G   S++ +++    F   SGL +++ KS I+ A +       
Sbjct: 249  MGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQ 308

Query: 907  ILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVR 1086
            + T      G +P RYLG+PL  +RL  + Y PL+ +I   I  WSS  LS+AGR  L+ 
Sbjct: 309  LHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLIS 368

Query: 1087 SVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLW-----DNGKVCIAWDTLCLPKNEGGLG 1251
            S++     FW+S F +P     +I +LC  +LW     ++ K  I+W+ +C PK+EGGLG
Sbjct: 369  SIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLG 428

Query: 1252 LRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVK-NSDSPLIKNILN 1428
            LR LK  N     K +W I    D+LW +WV H  L+ +  W      N  S + K IL 
Sbjct: 429  LRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKENANLGSWIWKKILK 488

Query: 1429 TRDQLIAECGGSVQLAEAKLTYWRD 1503
             R      C   V   E+  ++W D
Sbjct: 489  YRGVAKRFCKAEVGNGES-TSFWFD 512


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  407 bits (1045), Expect = e-110
 Identities = 200/465 (43%), Positives = 290/465 (62%), Gaps = 6/465 (1%)
 Frame = +1

Query: 1    ILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNT 180
            +  +EIK  +F++  +KSPGPDGY+S F+K SW I+G++V  A+Q FF  G L K +++T
Sbjct: 174  VTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNST 233

Query: 181  VIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIV 360
            ++ALIPK   A  + DYRPISCCNV+YK I+KILA RL  +L   I G Q AF+K R ++
Sbjct: 234  ILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLI 293

Query: 361  ENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQC 540
            EN+ L  EL++ Y++   S RC +KID+ KAFDS+ WSFL  +L  + FP  F +WI  C
Sbjct: 294  ENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLC 353

Query: 541  VTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPM 717
            +++ SFSI +NG L G+F+  +GLRQG  LSPYLFVI ++ LSR+L K      F +HP 
Sbjct: 354  MSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPR 413

Query: 718  CGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGD 897
            C  L +THL +ADDLM+L+ G   SV  ++  L  F AK GL + + K+ +Y+A V +  
Sbjct: 414  CKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHS 473

Query: 898  TEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 1077
             + + +      G +P RYLG+PL  +RL    Y PL+++I   I  W+S  LS+AGR  
Sbjct: 474  RQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLS 533

Query: 1078 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEG 1242
            L+ SVL  +  FWM+ F +P E   +I ++    LW        K  ++WD +C PK EG
Sbjct: 534  LINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEG 593

Query: 1243 GLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVW 1377
            GLGL+ L+  N+    K +W +   +D+LW +W     L+ ++ W
Sbjct: 594  GLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFW 638



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 2/154 (1%)
 Frame = +1

Query: 1522 SRDAYHFFRPKGTIVPWANVVWGRSIPPKHSFILWLCTHGRVLTKDRLGFME--LDVNCV 1695
            ++D ++  R       W   VW     PK SF  WL    R+ T DR+          CV
Sbjct: 762  TKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCV 821

Query: 1696 YCSQHRETAAHLFFECPFSKQVWTQIRSWMGITRQMSTLRSALKWMKKEAKGSGWRAKGQ 1875
            +CS   ET  HLFF+C +S ++WT I   +   R  ST  SA+     +++    ++   
Sbjct: 822  FCSSPMETRDHLFFQCCYSSEIWTSIAKNVYKDR-FSTKWSAVVNYISDSQPDRIQSFLS 880

Query: 1876 KAGLASTVYHLWNARNRLIFEKETPVVDKIVKQI 1977
            +     +++ +W  RN     +++     +++QI
Sbjct: 881  RYTFQVSIHSIWRERNSRRHGEKSRSASNLIRQI 914


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  394 bits (1011), Expect = e-106
 Identities = 201/448 (44%), Positives = 278/448 (62%), Gaps = 6/448 (1%)
 Frame = +1

Query: 7    DQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVI 186
            D +I++A F++   K+ GPDGYSS FFK  W +VG +VT AVQEFF SG LLKQ + T +
Sbjct: 450  DLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTL 509

Query: 187  ALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVEN 366
             LIPK  N+  + D+RPISC N +YK+I K+L  RL  +LN +I  +Q AF+ GR + EN
Sbjct: 510  VLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSEN 569

Query: 367  IHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVT 546
            + L  E++  YN K  S R  +K+DLRKAFDSV W F+      L  P  F  WI QC++
Sbjct: 570  VLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCIS 629

Query: 547  SPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCG 723
            +P FS+ +NG   GFFK  KGLRQGDPLSPYLFV+ +E  S LLK +  + + ++HP   
Sbjct: 630  TPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTA 689

Query: 724  ALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTE 903
             L I+HL++ADD+M+   G  +S+  + + L DF + SGLH+N  K+N+Y+A  DE +  
Sbjct: 690  DLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEAL 749

Query: 904  AILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELV 1083
            AI +       T+P RYLG+PL + +LK+  YE L+ +  S    W+  +LS+AGR +L+
Sbjct: 750  AI-SHYGFPISTLPIRYLGLPLMSRKLKISEYE-LVKRFRS----WAVKSLSFAGRVQLI 803

Query: 1084 RSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEGGL 1248
             SV+ G+  FWMS F +      KI  LC R+LW           IAW  +CLPKNEGG+
Sbjct: 804  TSVITGLVNFWMSTFVLLLGCVKKIESLCSRFLWSGSIDASKGAKIAWSGVCLPKNEGGV 863

Query: 1249 GLRDLKTWNQALLTKNLWNIHGQKDTLW 1332
            GLR    WN+    + +W +    D LW
Sbjct: 864  GLRRFTPWNKTFYLRFIWPLFADNDVLW 891


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  393 bits (1009), Expect = e-106
 Identities = 206/566 (36%), Positives = 313/566 (55%), Gaps = 11/566 (1%)
 Frame = +1

Query: 328  QGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGF 507
            Q AF+ G+ + +++ L  ELLR Y RK  +P+C ++ID++KA+D+V W  L+ +L  LGF
Sbjct: 375  QAAFVPGQQLHDHVMLAFELLRGYERKHGTPKCMLQIDIQKAYDTVHWDALEHILRELGF 434

Query: 508  PPTFNNWILQCVTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTK 687
            P  F  WI+  V S ++  +ING      +  +G+RQGDP+SP LF++ +EYL+R+L   
Sbjct: 435  PDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVMEYLNRILSQL 494

Query: 688  TQ-SHFNFHPMCGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKS 864
             +  +FN+H  C  ++IT+L +ADDL+L SRGD  SVQI++D    F    GLH+N  K 
Sbjct: 495  DKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSKC 554

Query: 865  NIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWS 1044
            NIY  +VD    E +L  +    G MPFRYLGIPL++++L + +Y+ L++KI   I  WS
Sbjct: 555  NIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWS 614

Query: 1045 SSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIA 1209
            +  LSYAGR +L++SV+     FWM   P+P  V  +I  +CR +LW        K  IA
Sbjct: 615  AGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIA 674

Query: 1210 WDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNV 1389
            W+ +C PK  GGL + +L  WN+  + K LWN+  + D LW +W+H  Y+R Q++W   +
Sbjct: 675  WEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVL 734

Query: 1390 KNSDSPLIKNILNTRDQLIAECGGSVQLAEAKLTYWRDGLPGTGSRDAYHFFRPKGTIVP 1569
            K S S ++ +++  R  L+        + + K  Y                   +   + 
Sbjct: 735  KKSHSWIMSSMMKLRPLLLQYQSRMQDVFKMKKIYLA--------------LFEESEKMS 780

Query: 1570 WANVVWGRSIPPKHSFILWLCTHGRVLTKDRL--GFMELDVNCVYCSQHRETAAHLFFEC 1743
            W  ++      P+  F LW   H R+ +KDRL    + +D NC +CS   E+  HLFF C
Sbjct: 781  WRTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNVDANCAFCSS-MESHEHLFFGC 839

Query: 1744 PFSKQVWTQIRSWMGITRQMSTLRSALKWMKKEAKGSGWRAKGQKAGLASTVYHLWNARN 1923
               K +WT + +W+ I    ST    L W+ ++ KG GWRA   K     T+YH+W  RN
Sbjct: 840  IELKTIWTAVLNWLQIIHMPSTWSEELNWITRKCKGKGWRAMLLKCAFTETIYHIWAYRN 899

Query: 1924 RLIF---EKETPVVDKIVKQIKTQVY 1992
              +F        V D I+  I  +V+
Sbjct: 900  HRVFGGNVNNRKVEDSIINTIIYRVW 925


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  392 bits (1007), Expect = e-106
 Identities = 199/482 (41%), Positives = 294/482 (60%), Gaps = 7/482 (1%)
 Frame = +1

Query: 10   QEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIA 189
            ++IK+A F++   K+ GPDG+S  FF   W I+G +VT A+ EFFTSG LLKQ + T + 
Sbjct: 347  EQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLV 406

Query: 190  LIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENI 369
            LIPK  NA +++D+RPISC N +YK+I+K+L  RL   L   I  +Q AF+ GR  +EN+
Sbjct: 407  LIPKITNASSMSDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENV 466

Query: 370  HLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTS 549
             L  EL+  YN+K  +P   +K+DLRKAFDSV W F+   L  L  P  F  WIL+C+++
Sbjct: 467  LLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLST 526

Query: 550  PSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTK-TQSHFNFHPMCGA 726
             SFS+ +NG   G F   KGLRQGDP+SPYLFV+ +E  S LL+++ T  +  +HP    
Sbjct: 527  ASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQ 586

Query: 727  LRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEA 906
            L I+HL++ADD+M+   G  +S+  +++ L DF   SGL MN  K+ +Y A + + ++++
Sbjct: 587  LEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDS 646

Query: 907  ILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVR 1086
             + S     G++P RYLG+PL + +L +  Y PL+ KI++  N W    LS+AGR +L+ 
Sbjct: 647  -MASYGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLA 705

Query: 1087 SVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEGGLG 1251
            SV+ G+  FW+S F +P     KI  LC R+LW +     G   +AW  +CLPK EGG+G
Sbjct: 706  SVISGIVNFWISSFILPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIG 765

Query: 1252 LRDLKTWNQALLTKNLWNIHGQKDTLWYRW-VHHTYLRAQTVWDWNVKNSDSPLIKNILN 1428
            LR     N+ L  + +W +     +LW  W   H+  ++ + W+   K  DS   K +L 
Sbjct: 766  LRRFAVSNRTLYLRMIWLLFSNSGSLWVAWHKQHSLGKSTSFWNQPEKPHDSWNWKCLLR 825

Query: 1429 TR 1434
             R
Sbjct: 826  LR 827



 Score = 66.6 bits (161), Expect = 4e-08
 Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 1513 GTGSRDAYHFFRPKGTIVPWANVVWGRSIPPKHSFILWLCTHGRVLTKDRLGF--MELDV 1686
            G  +   +   RP    VPWA  VW +   PKH+F LW     R+ TK RL    M++D 
Sbjct: 929  GFSAAATWSALRPSSAPVPWARAVWFKGATPKHAFHLWTAHLDRLPTKVRLASWGMQIDT 988

Query: 1687 NCVYCSQHRETAAHLFFECPFS 1752
             C  CS H ET  HLF  C F+
Sbjct: 989  TCGLCSLHPETRDHLFLSCDFA 1010


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  391 bits (1004), Expect = e-106
 Identities = 200/448 (44%), Positives = 276/448 (61%), Gaps = 6/448 (1%)
 Frame = +1

Query: 7    DQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVI 186
            D +I++A F++   K+ GPDGYSS FFK  W +VG +VT AVQEFF SG LLKQ + T +
Sbjct: 450  DLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTL 509

Query: 187  ALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVEN 366
             LIPK  N+  + D+RPISC N +YK+I K+L  RL  +LN +I  +Q AF+ GR + EN
Sbjct: 510  VLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSEN 569

Query: 367  IHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVT 546
            + L  E++  YN K  S R  +K+DLRKAFDSV W F+      L  P  F  WI QC++
Sbjct: 570  VLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCIS 629

Query: 547  SPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCG 723
            +P FS+ +NG   GFFK  KGLRQGDPLSPYLFV+ +E  S LLK +  + +  +HP   
Sbjct: 630  TPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTA 689

Query: 724  ALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTE 903
             L I+HL++ADD+M+   G  +S+  + + L DF + SGLH+N  K+N+Y+A  DE +  
Sbjct: 690  DLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEAL 749

Query: 904  AILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELV 1083
            AI +       T+P RYLG+PL + +LK+  YE L+ +  S    W+  +LS+AGR +L+
Sbjct: 750  AI-SHYGFPISTLPIRYLGLPLMSRKLKISEYE-LVKRFRS----WAVKSLSFAGRVQLI 803

Query: 1084 RSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEGGL 1248
             SV+ G+  FWMS F +      KI  LC R+LW           IAW  +CLPKNEGG+
Sbjct: 804  TSVITGLVNFWMSTFVLLLGCVKKIESLCSRFLWSGSIDASKGAKIAWSGVCLPKNEGGV 863

Query: 1249 GLRDLKTWNQALLTKNLWNIHGQKDTLW 1332
             LR    WN+    + +W +    D LW
Sbjct: 864  ALRRFTPWNKTFYLRFIWPLFADNDVLW 891


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1| AT4g02490
            [Arabidopsis thaliana]
          Length = 657

 Score =  390 bits (1001), Expect = e-105
 Identities = 220/648 (33%), Positives = 344/648 (53%), Gaps = 67/648 (10%)
 Frame = +1

Query: 25   ALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKS 204
            ALF++   K+PGPDG+   FF ++W IV E    A++EFF +G LLK  + T I LIPK 
Sbjct: 2    ALFSMPRNKAPGPDGFPVEFFLEAWPIVKESFIAAIKEFFLTGHLLKGFNATAITLIPKV 61

Query: 205  DNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQE 384
              A  +N +RP++CC  IYK+IT++++ RL   ++  +   Q  FIKGR + EN+ L  E
Sbjct: 62   PGADQLNLFRPVACCTTIYKVITRLISKRLNLFIDQAVQSNQVGFIKGRLLCENVLLASE 121

Query: 385  LLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSI 564
            L+  +  +  + R  +++DL KA+D+V+W FL  +L+ L  PP F NWI  C+++PS+SI
Sbjct: 122  LVDNFQAEGDTSRGCLQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCISTPSYSI 181

Query: 565  SINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKT-KTQSHFNFHPMCGALRITH 741
            + NG L GFF G+KG+RQGDP+S +LFV+ ++ L+R L     +  F  HP C A  ITH
Sbjct: 182  AYNGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITH 241

Query: 742  LVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTST 921
            L +ADD+++   G  +S+  ++D L  F   SGL +N+ K+ + +   +      +  S 
Sbjct: 242  LSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKTALLLDGGNFERNRIMAASL 301

Query: 922  QLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQG 1101
             +++G++P RYLG+PL ++++K   Y+PL+++I+S    W++  LS+AGR +L++SV+  
Sbjct: 302  GVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYS 361

Query: 1102 VECFWMSVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEGGLGLRDLK 1266
               FW S+F +P +   K+ Q+C  +LW        +  I+WD +C  K  GGLGL+ L 
Sbjct: 362  TINFWASIFILPNQCLHKLEQMCNAFLWSGAPNSAREAKISWDIVCSSKESGGLGLKRLS 421

Query: 1267 TWNQALLTKNLWNIHGQKDTLWY---RWVHHTYLRAQTV-----------------WDWN 1386
            +WN+ L  K +W +     +LW    RWV     + + V                 W  N
Sbjct: 422  SWNKVLALKLIWLLFTASGSLWVSWVRWVWRKLCKLREVARPFVICEVGSGITARFWQDN 481

Query: 1387 ------------------VKNSDSPLIKNILNTRDQLIAEC-----------------GG 1461
                              V  S + ++++ +   D  IA                   G 
Sbjct: 482  WTGHGPLIHLTGLTGPQLVGLSITSVVRDAIRNDDWWIASSRSRNPVILLLKSLLPPVGN 541

Query: 1462 SVQLAEAKLTYWR--DGLPGT--GSRDAYHFFRPKGTIVPWANVVWGRSIPPKHSFILWL 1629
             V         W+  D +P +   + D +   +P    V W   VW  +  PKH+FI W+
Sbjct: 542  LVDCEHDDSYLWKVGDRVPSSKFSTADTWRALQPFSVSVSWHKAVWFTNQVPKHAFISWV 601

Query: 1630 CTHGRVLTKDRLGFMELDV--NCVYCSQHRETAAHLFFECPFSKQVWT 1767
                R+ T+DRL    L V   CV C+   ET  HLFF C FS ++WT
Sbjct: 602  TAWNRLHTRDRLRSWGLIVPAECVLCNLVDETRDHLFFACRFSSRIWT 649


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  382 bits (981), Expect = e-103
 Identities = 214/592 (36%), Positives = 314/592 (53%), Gaps = 18/592 (3%)
 Frame = +1

Query: 202  SDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQ 381
            S   H ++ YRP+SCCNVIYKII+KI+A RL  VL   I G Q AF+K R ++EN+ L  
Sbjct: 47   SPTGHFISHYRPLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLAT 106

Query: 382  ELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFS 561
            EL++ Y+++  S RC IKID+ KAF+SV WSF++ +L  + FP  F +WI+ C+++ SFS
Sbjct: 107  ELVKDYHKESVSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFS 166

Query: 562  ISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRIT 738
            + +NG L GFF+ ++GLRQG  LSPYLFV+ ++ LS+LL +  +   F +H  C  L +T
Sbjct: 167  VQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLT 226

Query: 739  HLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTS 918
            HL +ADDLM+LS G   S+  +++    F   SGL +++ KS IY+A V E     I   
Sbjct: 227  HLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNR 286

Query: 919  TQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQ 1098
             Q   G +P RYLG+PL  +RL    Y PLL  I   I  W++  LSYAGR  L+ SVL 
Sbjct: 287  YQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLW 346

Query: 1099 GVECFWMSVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEGGLGLRDL 1263
             +  FW++ F +P E   +I ++C  +LW        K  + W  +C PK EGGLGLR L
Sbjct: 347  SICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSL 406

Query: 1264 KTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWD-WNVKNSDSPLIKNILNTRDQ 1440
            K  N+    K +W I    ++LW RW+    L+  T W      N DS L          
Sbjct: 407  KEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQTTTNMDSVL---------- 456

Query: 1441 LIAECGGSVQLAEAKLTYWR----DGLPGTGSRDAYHFFRPKGTIVPWANVVWGRSIPPK 1608
                              WR    + +P   +RD ++  R   T V W   +W     PK
Sbjct: 457  ------------------WRGRNDEYMPKFSTRDTWNQTRNTSTPVTWHMGIWFAHATPK 498

Query: 1609 HSFILWLCTHGRVLTKDRL--GFMELDVNCVYCSQHRETAAHLFFECPFSKQVWTQIRSW 1782
             SF  WL    R+ T D++      L   CV C+ + ET  HLFF C ++ ++W      
Sbjct: 499  FSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSCCYTAEIWE----- 553

Query: 1783 MGITRQMSTLRSALKWMK-KEAKGSGWRAKGQ----KAGLASTVYHLWNARN 1923
              + + +   + +  W     +  + WR + +    +    +T++ +W+ RN
Sbjct: 554  -NLAKNIYKAKFSTNWSTILTSVSTTWRNRTESFLARYIFQATIHTIWHERN 604