BLASTX nr result

ID: Rehmannia26_contig00017560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00017560
         (1497 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330025.1| predicted protein [Populus trichocarpa] gi|5...    60   2e-06
ref|XP_002318939.1| clathrin adaptor complexes medium subunit fa...    60   2e-06
gb|EXB53008.1| AP-3 complex subunit mu-1 [Morus notabilis]             59   5e-06
gb|EOY11708.1| Clathrin adaptor complexes medium subunit family ...    59   5e-06
gb|EOY11707.1| Clathrin adaptor complexes medium subunit family ...    59   5e-06
ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis ...    59   5e-06
gb|EMJ06462.1| hypothetical protein PRUPE_ppa006358mg [Prunus pe...    59   7e-06
ref|XP_006302217.1| hypothetical protein CARUB_v10020235mg [Caps...    58   9e-06

>ref|XP_002330025.1| predicted protein [Populus trichocarpa]
            gi|566168767|ref|XP_006382361.1| clathrin adaptor
            complexes medium subunit family protein [Populus
            trichocarpa] gi|550337720|gb|ERP60158.1| clathrin adaptor
            complexes medium subunit family protein [Populus
            trichocarpa]
          Length = 415

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = -3

Query: 1354 KFLCRVADVLSDYLDGLNQDPIKDNFVIVYEV 1259
            +FLCRVADVLSDYL+GLN+D IKDNFVIVYE+
Sbjct: 82   EFLCRVADVLSDYLEGLNEDVIKDNFVIVYEL 113


>ref|XP_002318939.1| clathrin adaptor complexes medium subunit family protein [Populus
            trichocarpa] gi|222857315|gb|EEE94862.1| clathrin adaptor
            complexes medium subunit family protein [Populus
            trichocarpa]
          Length = 415

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = -3

Query: 1354 KFLCRVADVLSDYLDGLNQDPIKDNFVIVYEV 1259
            +FLCRVADVLSDYL+GLN+D IKDNFVIVYE+
Sbjct: 82   EFLCRVADVLSDYLEGLNEDVIKDNFVIVYEL 113


>gb|EXB53008.1| AP-3 complex subunit mu-1 [Morus notabilis]
          Length = 415

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -3

Query: 1354 KFLCRVADVLSDYLDGLNQDPIKDNFVIVYEV 1259
            +FLCRVADVLSDYL GLN+D IKDNFVIVYE+
Sbjct: 82   EFLCRVADVLSDYLGGLNEDVIKDNFVIVYEL 113


>gb|EOY11708.1| Clathrin adaptor complexes medium subunit family protein isoform 2
            [Theobroma cacao]
          Length = 345

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -3

Query: 1354 KFLCRVADVLSDYLDGLNQDPIKDNFVIVYEV 1259
            +FLCRVADVLSDYL GLN+D IKDNFVIVYE+
Sbjct: 82   EFLCRVADVLSDYLGGLNEDVIKDNFVIVYEL 113


>gb|EOY11707.1| Clathrin adaptor complexes medium subunit family protein isoform 1
            [Theobroma cacao]
          Length = 415

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -3

Query: 1354 KFLCRVADVLSDYLDGLNQDPIKDNFVIVYEV 1259
            +FLCRVADVLSDYL GLN+D IKDNFVIVYE+
Sbjct: 82   EFLCRVADVLSDYLGGLNEDVIKDNFVIVYEL 113


>ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis vinifera]
            gi|296089804|emb|CBI39623.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -3

Query: 1354 KFLCRVADVLSDYLDGLNQDPIKDNFVIVYEV 1259
            +FLCRVADVLSDYL GLN+D IKDNFVIVYE+
Sbjct: 82   EFLCRVADVLSDYLGGLNEDVIKDNFVIVYEL 113


>gb|EMJ06462.1| hypothetical protein PRUPE_ppa006358mg [Prunus persica]
          Length = 415

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -3

Query: 1354 KFLCRVADVLSDYLDGLNQDPIKDNFVIVYEV 1259
            +FLCRVADVLSDYL GLN+D IKDNFVIVYE+
Sbjct: 82   EFLCRVADVLSDYLGGLNEDLIKDNFVIVYEL 113


>ref|XP_006302217.1| hypothetical protein CARUB_v10020235mg [Capsella rubella]
            gi|482570927|gb|EOA35115.1| hypothetical protein
            CARUB_v10020235mg [Capsella rubella]
          Length = 468

 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -3

Query: 1354 KFLCRVADVLSDYLDGLNQDPIKDNFVIVYEV 1259
            +FLCRVADVLSDYL GLN+D IKDNF+IVYE+
Sbjct: 135  EFLCRVADVLSDYLGGLNEDLIKDNFIIVYEL 166


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