BLASTX nr result
ID: Rehmannia26_contig00016814
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00016814
(342 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006362063.1| PREDICTED: transcription initiation factor T... 72 8e-11
ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262... 72 8e-11
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252... 70 2e-10
emb|CBI19420.3| unnamed protein product [Vitis vinifera] 70 2e-10
ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295... 68 1e-09
ref|XP_006386481.1| hypothetical protein POPTR_0002s12080g [Popu... 67 2e-09
ref|XP_002302416.1| predicted protein [Populus trichocarpa] 67 2e-09
ref|XP_002320699.1| hypothetical protein POPTR_0014s01830g [Popu... 66 4e-09
gb|EOY15763.1| TBP-associated factor 4, putative isoform 3, part... 65 9e-09
gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theo... 65 9e-09
gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theo... 65 9e-09
gb|ESW32892.1| hypothetical protein PHAVU_001G026300g [Phaseolus... 65 1e-08
gb|ESW32891.1| hypothetical protein PHAVU_001G026300g [Phaseolus... 65 1e-08
ref|XP_006280020.1| hypothetical protein CARUB_v10025896mg [Caps... 65 1e-08
ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thalian... 65 1e-08
ref|XP_002863689.1| transcription initiation factor [Arabidopsis... 65 1e-08
ref|NP_199127.3| TBP-associated factor 4 [Arabidopsis thaliana] ... 65 1e-08
ref|XP_002510115.1| transcription initiation factor, putative [R... 64 2e-08
ref|XP_006601269.1| PREDICTED: transcription initiation factor T... 64 3e-08
gb|EMJ11585.1| hypothetical protein PRUPE_ppa001063mg [Prunus pe... 63 4e-08
>ref|XP_006362063.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Solanum tuberosum]
Length = 934
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNTXXXXXXXXXXXXXXXXGSSQT 320
MDP+IMK LEEDEDETMHSGADVEAFTA LNRDI G+N+ GSS T
Sbjct: 1 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIGGDNS--QSQPSDSDSVPLSQGSSYT 58
Query: 321 ASQF 332
++QF
Sbjct: 59 SNQF 62
>ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262209 [Solanum
lycopersicum]
Length = 934
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNTXXXXXXXXXXXXXXXXGSSQT 320
MDP+IMK LEEDEDETMHSGADVEAFTA LNRDI G+N+ GSS T
Sbjct: 1 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIGGDNS--QSQPSDSDSVPLSQGSSYT 58
Query: 321 ASQF 332
++QF
Sbjct: 59 SNQF 62
>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
Length = 922
Score = 70.5 bits (171), Expect = 2e-10
Identities = 38/67 (56%), Positives = 44/67 (65%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNTXXXXXXXXXXXXXXXXGSSQT 320
MDP+IMK LEEDEDETMHSGADVEA TA LNRDIEG+ + GS+ T
Sbjct: 1 MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTS---TSQPSDSENVLSQGSNHT 57
Query: 321 ASQFLNQ 341
+SQ +Q
Sbjct: 58 SSQLFSQ 64
>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 70.5 bits (171), Expect = 2e-10
Identities = 38/67 (56%), Positives = 44/67 (65%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNTXXXXXXXXXXXXXXXXGSSQT 320
MDP+IMK LEEDEDETMHSGADVEA TA LNRDIEG+ + GS+ T
Sbjct: 1 MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTS---TSQPSDSENVLSQGSNHT 57
Query: 321 ASQFLNQ 341
+SQ +Q
Sbjct: 58 SSQLFSQ 64
>ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295421 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 68.2 bits (165), Expect = 1e-09
Identities = 38/67 (56%), Positives = 43/67 (64%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNTXXXXXXXXXXXXXXXXGSSQT 320
MDP+IMK LE+DEDETMHSGADVEAF A LNRDIEG + GS+ T
Sbjct: 1 MDPSIMKLLEDDEDETMHSGADVEAFQAALNRDIEG-DVSALQQPSDSDSAVLSQGSNNT 59
Query: 321 ASQFLNQ 341
+SQ L Q
Sbjct: 60 SSQSLPQ 66
>ref|XP_006386481.1| hypothetical protein POPTR_0002s12080g [Populus trichocarpa]
gi|550344829|gb|ERP64278.1| hypothetical protein
POPTR_0002s12080g [Populus trichocarpa]
Length = 580
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGN 251
MDPNIMK LEEDEDETMHSGADVEAF A LNRDI G+
Sbjct: 1 MDPNIMKLLEEDEDETMHSGADVEAFQAALNRDIGGD 37
>ref|XP_002302416.1| predicted protein [Populus trichocarpa]
Length = 64
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGN 251
MDPNIMK LEEDEDETMHSGADVEAF A LNRDI G+
Sbjct: 1 MDPNIMKLLEEDEDETMHSGADVEAFQAALNRDIGGD 37
>ref|XP_002320699.1| hypothetical protein POPTR_0014s01830g [Populus trichocarpa]
gi|222861472|gb|EEE99014.1| hypothetical protein
POPTR_0014s01830g [Populus trichocarpa]
Length = 875
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGN 251
MDPNIM+ LEEDEDETMHSGADVEAF A LNRDI G+
Sbjct: 1 MDPNIMRLLEEDEDETMHSGADVEAFQAALNRDIGGD 37
>gb|EOY15763.1| TBP-associated factor 4, putative isoform 3, partial [Theobroma
cacao]
Length = 707
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGN 251
MDP+I+K LEEDEDE+MHSGADVEAF A LNRDIEG+
Sbjct: 1 MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGD 37
>gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
Length = 944
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGN 251
MDP+I+K LEEDEDE+MHSGADVEAF A LNRDIEG+
Sbjct: 1 MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGD 37
>gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao]
Length = 950
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGN 251
MDP+I+K LEEDEDE+MHSGADVEAF A LNRDIEG+
Sbjct: 1 MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGD 37
>gb|ESW32892.1| hypothetical protein PHAVU_001G026300g [Phaseolus vulgaris]
Length = 935
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/67 (53%), Positives = 42/67 (62%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNTXXXXXXXXXXXXXXXXGSSQT 320
MDP+IMK LE+DEDETMHSG DVEAF A LNRDI G+ GS+ T
Sbjct: 1 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGD----LSASLPGSDAVLSQGSNNT 56
Query: 321 ASQFLNQ 341
+SQ L+Q
Sbjct: 57 SSQSLSQ 63
>gb|ESW32891.1| hypothetical protein PHAVU_001G026300g [Phaseolus vulgaris]
Length = 931
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/67 (53%), Positives = 42/67 (62%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNTXXXXXXXXXXXXXXXXGSSQT 320
MDP+IMK LE+DEDETMHSG DVEAF A LNRDI G+ GS+ T
Sbjct: 1 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGD----LSASLPGSDAVLSQGSNNT 56
Query: 321 ASQFLNQ 341
+SQ L+Q
Sbjct: 57 SSQSLSQ 63
>ref|XP_006280020.1| hypothetical protein CARUB_v10025896mg [Capsella rubella]
gi|482548724|gb|EOA12918.1| hypothetical protein
CARUB_v10025896mg [Capsella rubella]
Length = 818
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNT 257
MDP+I K LEEDEDE+MHSGADV+AF A LNRDIEG+ T
Sbjct: 1 MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGSMT 39
>ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thaliana]
gi|550540908|sp|F4K4L7.1|TAF4B_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 4b;
AltName: Full=TBP-associated factor 4b; Short=AtTAF4b
gi|332007531|gb|AED94914.1| TBP-associated factor 4
[Arabidopsis thaliana]
Length = 852
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNT 257
MDP+I K LEEDEDE+MHSGADV+AF A LNRDIEG+ T
Sbjct: 1 MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGSMT 39
>ref|XP_002863689.1| transcription initiation factor [Arabidopsis lyrata subsp. lyrata]
gi|297309524|gb|EFH39948.1| transcription initiation
factor [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNT 257
MDP+I K LEEDEDE+MHSGADV+AF A LNRDIEG+ T
Sbjct: 1 MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGSMT 39
>ref|NP_199127.3| TBP-associated factor 4 [Arabidopsis thaliana]
gi|38490053|gb|AAR21620.1| TATA-binding protein
associated factor 4b [Arabidopsis thaliana]
gi|110738778|dbj|BAF01312.1| hypothetical protein
[Arabidopsis thaliana] gi|332007530|gb|AED94913.1|
TBP-associated factor 4 [Arabidopsis thaliana]
Length = 823
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNT 257
MDP+I K LEEDEDE+MHSGADV+AF A LNRDIEG+ T
Sbjct: 1 MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGSMT 39
>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
gi|223550816|gb|EEF52302.1| transcription initiation
factor, putative [Ricinus communis]
Length = 925
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +3
Query: 141 MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGN 251
MDP+IMK LEEDEDE+MHSGADVEAF A LNRDI G+
Sbjct: 1 MDPSIMKLLEEDEDESMHSGADVEAFQAALNRDIGGD 37
>ref|XP_006601269.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Glycine max]
Length = 976
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/70 (51%), Positives = 42/70 (60%)
Frame = +3
Query: 132 EFFMDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNTXXXXXXXXXXXXXXXXGS 311
E MDP+IMK LE+DEDE MHSG DVEAF A LNRDI G+ GS
Sbjct: 38 EVAMDPSIMKLLEDDEDEAMHSGVDVEAFQAALNRDIGGD---VSTSQFSGSDAVLSQGS 94
Query: 312 SQTASQFLNQ 341
+ T+SQ L+Q
Sbjct: 95 NNTSSQSLSQ 104
>gb|EMJ11585.1| hypothetical protein PRUPE_ppa001063mg [Prunus persica]
Length = 920
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +3
Query: 141 MDPNIMK-FLEEDEDETMHSGADVEAFTAELNRDIEGNNTXXXXXXXXXXXXXXXXGSSQ 317
MDP+IMK LE+DEDETMHSGADVEAF A LNRDIEG+ GS+
Sbjct: 1 MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGD---VSVSQPSDSDSVLSQGSNN 57
Query: 318 TASQFLNQ 341
T+SQ L Q
Sbjct: 58 TSSQSLPQ 65