BLASTX nr result

ID: Rehmannia26_contig00016698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00016698
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...   134   2e-29
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct...    92   5e-17
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu...    92   5e-17
gb|EOY31163.1| Uncharacterized protein TCM_038148 [Theobroma cacao]    92   9e-17
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               59   1e-15
ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin...    73   9e-15
ref|XP_002442952.1| hypothetical protein SORBIDRAFT_08g005385 [S...    68   1e-09
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    59   9e-07

>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score =  134 bits (336), Expect = 2e-29
 Identities = 66/70 (94%), Positives = 66/70 (94%)
 Frame = -3

Query: 415 AGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQ 236
           AGNNRKEGVHVAA  APFLVNGAQQVRHLLQKRESTSDNH SARQRVEWPRADLFGYIIQ
Sbjct: 93  AGNNRKEGVHVAAVSAPFLVNGAQQVRHLLQKRESTSDNHVSARQRVEWPRADLFGYIIQ 152

Query: 235 VESRVTGTAV 206
           VESRVTG AV
Sbjct: 153 VESRVTGKAV 162


>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
           gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
           subunit 2 [Beta vulgaris subsp. vulgaris]
          Length = 515

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 64/144 (44%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
 Frame = -3

Query: 415 AGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQ 236
           AGNNRKEGVHVAAA APFLVN A       ++R      +ASA        +DLFGYIIQ
Sbjct: 88  AGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQ 147

Query: 235 VESRVTGTAV*WKXXXXXXXXXXXFVENSSFPFV*IPQ------RRIQNLWGPIYSISRA 74
           VES VTGTA                V+ + F    +         RIQN WGP    S +
Sbjct: 148 VESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQNFWGPSIP-SSS 200

Query: 73  PKKTPSPSDSISLLTLYMWAPDIY 2
           P KTP P         YMWAPDIY
Sbjct: 201 PAKTPLPFGLNIFFDSYMWAPDIY 224


>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
          Length = 464

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 64/144 (44%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
 Frame = -3

Query: 415 AGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQ 236
           AGNNRKEGVHVAAA APFLVN A       ++R      +ASA        +DLFGYIIQ
Sbjct: 37  AGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQ 96

Query: 235 VESRVTGTAV*WKXXXXXXXXXXXFVENSSFPFV*IPQ------RRIQNLWGPIYSISRA 74
           VES VTGTA                V+ + F    +         RIQN WGP    S +
Sbjct: 97  VESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQNFWGPSIP-SSS 149

Query: 73  PKKTPSPSDSISLLTLYMWAPDIY 2
           P KTP P         YMWAPDIY
Sbjct: 150 PAKTPLPFGLNIFFDSYMWAPDIY 173


>gb|EOY31163.1| Uncharacterized protein TCM_038148 [Theobroma cacao]
          Length = 538

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = -3

Query: 346 QQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQVESRVTGTAV 206
           +QVRHLL+KRESTSDNHASARQRVEWPRADLFGYIIQVES VTGTAV
Sbjct: 492 EQVRHLLEKRESTSDNHASARQRVEWPRADLFGYIIQVESGVTGTAV 538


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 59.3 bits (142), Expect(2) = 1e-15
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -2

Query: 416 RWQQQKGRGPCSCCARPLLSQWGT 345
           RWQQQKGRGPCSCCARPLLSQWG+
Sbjct: 200 RWQQQKGRGPCSCCARPLLSQWGS 223



 Score = 48.9 bits (115), Expect(2) = 1e-15
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = -1

Query: 345 SRFGIYYKRENPLQITTPLLGS 280
           SRFGIYYKRENPLQITTPLLGS
Sbjct: 223 SRFGIYYKRENPLQITTPLLGS 244


>ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
           chain 2-like, partial [Cucumis sativus]
          Length = 472

 Score = 73.2 bits (178), Expect(2) = 9e-15
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = -1

Query: 174 RALFSLRIPRSLSCEFPSGEFKTCGALSIPSLEPRRKPP 58
           RALFSL IPRSLSC FPSGEF+TCGALSIPSL+PR KPP
Sbjct: 44  RALFSLIIPRSLSCSFPSGEFETCGALSIPSLKPRXKPP 82



 Score = 32.3 bits (72), Expect(2) = 9e-15
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -3

Query: 67  KTPSPSDSISLLTLYMWAPDIY 2
           K P PS  +  LTLYMWAPDIY
Sbjct: 80  KPPLPSGPL-FLTLYMWAPDIY 100


>ref|XP_002442952.1| hypothetical protein SORBIDRAFT_08g005385 [Sorghum bicolor]
           gi|241943645|gb|EES16790.1| hypothetical protein
           SORBIDRAFT_08g005385 [Sorghum bicolor]
          Length = 102

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/53 (64%), Positives = 40/53 (75%)
 Frame = -3

Query: 160 VENSSFPFV*IPQRRIQNLWGPIYSISRAPKKTPSPSDSISLLTLYMWAPDIY 2
           VEN S     +    + NLWGPIYSISRAP+K+PSPS+SISLL LYM +PDIY
Sbjct: 11  VENKSL-LCELSSGELTNLWGPIYSISRAPRKSPSPSNSISLLILYMLSPDIY 62


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/36 (80%), Positives = 30/36 (83%)
 Frame = -1

Query: 165 FSLRIPRSLSCEFPSGEFKTCGALSIPSLEPRRKPP 58
           FS RI RSLSCEFPSGEF T  ALSIPSL+PR KPP
Sbjct: 467 FSSRILRSLSCEFPSGEFNTFWALSIPSLKPRIKPP 502


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