BLASTX nr result
ID: Rehmannia26_contig00016621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00016621
(640 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 69 5e-16
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 67 3e-15
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 64 9e-15
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 64 1e-14
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 64 1e-14
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 60 3e-14
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 60 3e-14
emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group] 66 3e-13
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 61 3e-13
ref|NP_001054298.1| Os04g0682600 [Oryza sativa Japonica Group] g... 66 4e-13
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 57 2e-12
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 57 5e-12
gb|ABA95357.2| retrotransposon protein, putative, unclassified [... 63 1e-11
ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group] g... 69 3e-11
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g... 59 3e-11
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 53 5e-11
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 53 5e-11
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 52 6e-11
gb|AAL77156.1|AC091732_7 Putative polyprotein [Oryza sativa Japo... 55 2e-10
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 57 2e-10
>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 68.9 bits (167), Expect(2) = 5e-16
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +2
Query: 317 HLYYPSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKY 496
+L P P+LPL + DG+ K P+ +L R + R+N PV Q LVHW N ATWED +
Sbjct: 1304 NLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDATWEDSAF 1363
Query: 497 LKAKFPSY 520
++A FP +
Sbjct: 1364 IQATFPHF 1371
Score = 41.6 bits (96), Expect(2) = 5e-16
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +3
Query: 195 QSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+S RS D + LK+QP+RQN+ LR SLKL +K++G + IL++I
Sbjct: 1229 RSERSFQEGD---MVYLKMQPYRQNAFGLRGSLKLRAKFYGPFRILKRI 1274
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 66.6 bits (161), Expect(2) = 3e-15
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P P+LP PDG K P +L R I R N PV Q L+ W N ++ATWED Y++A
Sbjct: 1546 PMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWEDASYIQAA 1605
Query: 509 FPSY 520
FP++
Sbjct: 1606 FPNF 1609
Score = 41.2 bits (95), Expect(2) = 3e-15
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = +3
Query: 195 QSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+S R+L++ D + LKLQP+RQ ++ +R SLKL SKY+G + ++ ++
Sbjct: 1467 RSERTLELGD---MVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKM 1512
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 63.9 bits (154), Expect(2) = 9e-15
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P P+LP PDG K P+ +L R I R N V Q L+ W N ++ATWED Y++
Sbjct: 890 PMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKV 949
Query: 509 FPSY 520
FP++
Sbjct: 950 FPNF 953
Score = 42.4 bits (98), Expect(2) = 9e-15
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +3
Query: 192 HQSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+++ R L++ D + LKLQP+RQN+ +R SLKL KY+G + +L ++
Sbjct: 810 NRTERKLEVGD---MVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKV 856
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 64.3 bits (155), Expect(2) = 1e-14
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P P+LPL DG K PL +L R I R+N PV Q L+HW N ATWE+ +++A
Sbjct: 1181 PLPNLPLVGADGTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQAT 1240
Query: 509 FPSY 520
FP +
Sbjct: 1241 FPHF 1244
Score = 41.2 bits (95), Expect(2) = 1e-14
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +3
Query: 195 QSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+S R ++ D + LK+QP+RQN+ LR SLKL +K++G + +L +I
Sbjct: 1102 RSERQFELGD---MVYLKMQPYRQNAFGLRGSLKLRAKFYGPFRVLEKI 1147
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 64.3 bits (155), Expect(2) = 1e-14
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P P+LPL DG K PL +L R I R+N PV Q L+HW N ATWE+ +++A
Sbjct: 1095 PLPNLPLVGADGTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQAT 1154
Query: 509 FPSY 520
FP +
Sbjct: 1155 FPHF 1158
Score = 41.2 bits (95), Expect(2) = 1e-14
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +3
Query: 195 QSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+S R ++ D + LK+QP+RQN+ LR SLKL +K++G + +L +I
Sbjct: 1016 RSERQFELGD---MVYLKMQPYRQNAFGLRGSLKLRAKFYGPFRVLEKI 1061
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 59.7 bits (143), Expect(2) = 3e-14
Identities = 27/64 (42%), Positives = 34/64 (53%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P LPL + +G PL +L R I R N PV Q +HW N S ATWED ++
Sbjct: 801 PEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKV 860
Query: 509 FPSY 520
FPS+
Sbjct: 861 FPSF 864
Score = 45.1 bits (105), Expect(2) = 3e-14
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 147 NLISLQYITVYNNWYHQSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYT 326
+L+ Q Y H+ R+L++ D + LK+QP+R NS+ L SLKL S+Y+G +
Sbjct: 706 HLVKAQARMKYFADQHRQERTLEVGD---MVYLKMQPYRHNSLGLHSSLKLHSRYYGPFR 762
Query: 327 ILRQI 341
+L +I
Sbjct: 763 VLERI 767
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 59.7 bits (143), Expect(2) = 3e-14
Identities = 27/64 (42%), Positives = 34/64 (53%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P LPL + +G PL +L R I R N PV Q +HW N S ATWED ++
Sbjct: 580 PEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKV 639
Query: 509 FPSY 520
FPS+
Sbjct: 640 FPSF 643
Score = 45.1 bits (105), Expect(2) = 3e-14
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 147 NLISLQYITVYNNWYHQSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYT 326
+L+ Q Y H+ R+L++ D + LK+QP+R NS+ L SLKL S+Y+G +
Sbjct: 485 HLVKAQARMKYFADQHRQERTLEVGD---MVYLKMQPYRHNSLGLHSSLKLHSRYYGPFR 541
Query: 327 ILRQI 341
+L +I
Sbjct: 542 VLERI 546
>emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
Length = 1575
Score = 66.2 bits (160), Expect(2) = 3e-13
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +2
Query: 335 PDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAKFP 514
P LP+ NPD P++IL HR+I R + ++Q L+ W SS TWE + ++AKFP
Sbjct: 1463 PSLPVLNPDAGHLAIPIKILDHRSIRRGSKMIKQVLIRWSGVSSSADTWESLDEMQAKFP 1522
Query: 515 SYP-WGQGSFLQGG 553
+ P WGQ QGG
Sbjct: 1523 AAPAWGQAE-TQGG 1535
Score = 34.7 bits (78), Expect(2) = 3e-13
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 243 LKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+KLQP+ Q SV R + KL KY+G + +L++I
Sbjct: 1395 MKLQPYIQQSVMTRSNRKLSFKYYGPFQVLQRI 1427
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 60.8 bits (146), Expect(2) = 3e-13
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P +LP PDG K PL +L R + RK V Q L+ W N ++ATWED ++A
Sbjct: 1410 PMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAM 1469
Query: 509 FPSY 520
FPS+
Sbjct: 1470 FPSF 1473
Score = 40.0 bits (92), Expect(2) = 3e-13
Identities = 19/50 (38%), Positives = 37/50 (74%)
Frame = +3
Query: 192 HQSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+++ R+L++ D + LKL+P+RQ++ +R SLKL SK++G + +L++I
Sbjct: 1330 NRTERNLEVGD---MVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKI 1376
>ref|NP_001054298.1| Os04g0682600 [Oryza sativa Japonica Group]
gi|113565869|dbj|BAF16212.1| Os04g0682600, partial
[Oryza sativa Japonica Group]
Length = 395
Score = 66.2 bits (160), Expect(2) = 4e-13
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +2
Query: 335 PDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAKFP 514
P LP+ NPD P++IL HR+I R + ++Q L+ W SS TWE + ++AKFP
Sbjct: 283 PSLPVLNPDAGHLAIPIKILDHRSIRRGSKMIKQVLIRWSGVSSSADTWESLDEMQAKFP 342
Query: 515 SYP-WGQGSFLQGG 553
+ P WGQ QGG
Sbjct: 343 AAPAWGQAE-TQGG 355
Score = 34.7 bits (78), Expect(2) = 4e-13
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 243 LKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+KLQP+ Q SV R + KL KY+G + +L++I
Sbjct: 215 MKLQPYIQQSVMTRSNRKLSFKYYGPFQVLQRI 247
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 56.6 bits (135), Expect(2) = 2e-12
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P P LPL++ +G+ P +L R I + N PV Q V W N S ATWED ++
Sbjct: 1246 PEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAATWEDAAFISKV 1305
Query: 509 FPSY 520
FP++
Sbjct: 1306 FPAF 1309
Score = 41.6 bits (96), Expect(2) = 2e-12
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +3
Query: 243 LKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
LK+QP+R NS+ L SLKL SKY+G + +L +I
Sbjct: 1180 LKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERI 1212
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 57.4 bits (137), Expect(2) = 5e-12
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P +LP PDG K P+ +L R I R V Q LV W N S+ATWED +++
Sbjct: 1521 PMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSM 1580
Query: 509 FPSY 520
FPS+
Sbjct: 1581 FPSF 1584
Score = 39.7 bits (91), Expect(2) = 5e-12
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +3
Query: 192 HQSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
++S R+L + D + LKLQP+RQ + +R SLKL SK++G + I+ ++
Sbjct: 1441 NRSERTLAVGD---MVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKV 1487
>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +2
Query: 335 PDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAKFP 514
P LP+ NPD P++IL H +I R + ++Q L+ W SS TWE + ++AKFP
Sbjct: 2699 PSLPVLNPDAGHLAIPIKILDHCSIRRGSKMIKQVLIRWSGVSSSADTWESLDEMQAKFP 2758
Query: 515 SYP-WGQGSFLQGG 553
+ P WGQ QGG
Sbjct: 2759 AAPAWGQAE-TQGG 2771
Score = 32.7 bits (73), Expect(2) = 1e-11
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 243 LKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+KLQP+ Q S R + KL KY+G + +L++I
Sbjct: 2631 MKLQPYIQQSFMTRSNRKLSFKYYGPFQVLQRI 2663
>ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group]
gi|113565354|dbj|BAF15697.1| Os04g0603800, partial
[Oryza sativa Japonica Group]
Length = 123
Score = 68.9 bits (167), Expect(2) = 3e-11
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +2
Query: 317 HLYYPSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKY 496
+L P P+LPL + DG+ K P+ +L R + R+N PV Q LVHW N ATWED +
Sbjct: 54 NLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDATWEDSAF 113
Query: 497 LKAKFPSY 520
++A FP +
Sbjct: 114 IQATFPHF 121
Score = 25.8 bits (55), Expect(2) = 3e-11
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 279 LRKSLKLCSKYFGTYTILRQI 341
LR SLKL +K++G + IL++I
Sbjct: 4 LRGSLKLRAKFYGPFRILKRI 24
>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
gi|255678117|dbj|BAH94093.1| Os08g0123950, partial
[Oryza sativa Japonica Group]
Length = 783
Score = 59.3 bits (142), Expect(2) = 3e-11
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 323 YYPSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLK 502
+ PS PLS P P+ +L HR + N V Q L HW + +QATWED+ LK
Sbjct: 639 FQPSVHTPLS-PTYSAVQYPIALLDHRLTKKGNHTVHQVLTHWSDTIPAQATWEDLHDLK 697
Query: 503 AKFP-SYPWGQGSFLQGGIVMNS 568
A+FP + WGQ GIV +S
Sbjct: 698 ARFPNALAWGQAKTQGEGIVRSS 720
Score = 35.0 bits (79), Expect(2) = 3e-11
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 243 LKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
LKLQP+ Q+SV R + KL KYFG + IL ++
Sbjct: 577 LKLQPYVQSSVAPRANHKLAFKYFGPFQILEKL 609
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 53.1 bits (126), Expect(2) = 5e-11
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P +LP PDG K P+ +L R I R V Q L+ W N + ATWED +++
Sbjct: 1448 PMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADATWEDAAVIQSM 1507
Query: 509 FPSY 520
+P++
Sbjct: 1508 YPTF 1511
Score = 40.4 bits (93), Expect(2) = 5e-11
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +3
Query: 195 QSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
++ RSL++ D + +KLQP+RQ + +R SLKL SK++G + +L +I
Sbjct: 1369 RTERSLNVGD---MVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKI 1414
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 53.1 bits (126), Expect(2) = 5e-11
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
P +LP PDG K P+ +L R I R V Q L+ W N + ATWED +++
Sbjct: 1346 PMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADATWEDAAVIQSM 1405
Query: 509 FPSY 520
+P++
Sbjct: 1406 YPTF 1409
Score = 40.4 bits (93), Expect(2) = 5e-11
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +3
Query: 195 QSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
++ RSL++ D + +KLQP+RQ + +R SLKL SK++G + +L +I
Sbjct: 1267 RTERSLNVGD---MVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKI 1312
>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 51.6 bits (122), Expect(2) = 6e-11
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +2
Query: 317 HLYYPSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQAT 478
+L P P+LPL + DG+ K P+ +L R + R+N PV Q LVHW N AT
Sbjct: 1381 NLAVPLPNLPLVDEDGNIKAEPVAVLARRVVPRRNEPVTQWLVHWENLTPEDAT 1434
Score = 41.6 bits (96), Expect(2) = 6e-11
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +3
Query: 195 QSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
+S RS D + LK+QP+RQN+ LR SLKL +K++G + IL++I
Sbjct: 1306 RSERSFQEGD---MVYLKMQPYRQNTFGLRGSLKLRAKFYGPFRILKRI 1351
>gb|AAL77156.1|AC091732_7 Putative polyprotein [Oryza sativa Japonica Group]
gi|21672107|gb|AAM74469.1|AC124213_27 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431768|gb|AAP53494.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 999
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 332 SPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAKF 511
SP+LPL D + P +L I R V L+ W + ATWE++++LK +F
Sbjct: 929 SPELPLQITDDSVLLQPEVVLRRSLIKRGKAAVPYGLIQWTGVPAELATWENLRHLKLRF 988
Query: 512 PSYP-WGQ 532
PS P WGQ
Sbjct: 989 PSAPAWGQ 996
Score = 37.0 bits (84), Expect(2) = 2e-10
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 243 LKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
LKLQPF Q S+ R K+ +YFG YT+L ++
Sbjct: 862 LKLQPFAQLSIAQRSCQKISFRYFGPYTVLERV 894
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 329 PSPDLPLSNPDGHFKIAPLEILHHRTISRKNTPVEQALVHWCNADSSQATWEDIKYLKAK 508
PSP+LP+ DG K P + R + R +T V Q LV W N A+WED ++K+
Sbjct: 1271 PSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWANLPPEDASWEDASFIKST 1330
Query: 509 FPSY 520
FP +
Sbjct: 1331 FPEF 1334
Score = 33.9 bits (76), Expect(2) = 2e-10
Identities = 15/50 (30%), Positives = 33/50 (66%)
Frame = +3
Query: 192 HQSHRSLDMADGTRLKDLKLQPFRQNSVHLRKSLKLCSKYFGTYTILRQI 341
++S R L + D + LK+QP+R + L+++LKL S ++G + +++++
Sbjct: 1191 NRSERQLTVGD---MVYLKMQPYRTTAFGLKQALKLTSIFYGPFRVMQRV 1237