BLASTX nr result

ID: Rehmannia26_contig00016481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00016481
         (387 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS66359.1| hypothetical protein M569_08419, partial [Genlise...    95   8e-18
ref|XP_003544866.1| PREDICTED: U-box domain-containing protein 4...    64   3e-08
gb|EMJ16762.1| hypothetical protein PRUPE_ppa007422mg [Prunus pe...    63   5e-08
ref|XP_004303582.1| PREDICTED: U-box domain-containing protein 3...    62   8e-08
ref|XP_004303581.1| PREDICTED: U-box domain-containing protein 3...    62   8e-08
gb|ESW13361.1| hypothetical protein PHAVU_008G189800g [Phaseolus...    62   1e-07
ref|XP_002532213.1| Vacuolar protein, putative [Ricinus communis...    60   3e-07
gb|EOX93564.1| ARM repeat superfamily protein [Theobroma cacao]        57   2e-06
ref|XP_003519236.1| PREDICTED: U-box domain-containing protein 3...    57   2e-06
ref|XP_006447834.1| hypothetical protein CICLE_v10015636mg [Citr...    56   6e-06
gb|EXB34465.1| U-box domain-containing protein 3 [Morus notabilis]     55   7e-06
ref|XP_003615542.1| U-box domain-containing protein [Medicago tr...    55   7e-06

>gb|EPS66359.1| hypothetical protein M569_08419, partial [Genlisea aurea]
          Length = 94

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 52/74 (70%), Positives = 60/74 (81%)
 Frame = -1

Query: 318 SKGTPPPPWSRKMIVEEVARVLNYGDLKAKIEAARDVRRLVRKSSSANSKSAVRCGFAAA 139
           SK +  P WS  M+V+ VAR L  GD+ AKI+AARDVRRLVR+SSS+NSK+AVR  FAAA
Sbjct: 21  SKESLSPLWSPNMMVDYVARRLVKGDILAKIDAARDVRRLVRRSSSSNSKTAVRGRFAAA 80

Query: 138 GVIEPLVSMLHSSF 97
           GVIEPLVSMLH SF
Sbjct: 81  GVIEPLVSMLHGSF 94


>ref|XP_003544866.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 379

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = -1

Query: 270 EVARVLNYGDLKAKIEAARDVRRLVRKSSSANSKSAVRCGFAAAGVIEPLVSMLHSS 100
           E++  L  G+L AKIEAAR++R++VRKSSS++SK+  R   AAAGVIEPLV ML SS
Sbjct: 31  ELSETLTNGNLSAKIEAAREIRKMVRKSSSSSSKT--RAKLAAAGVIEPLVLMLSSS 85


>gb|EMJ16762.1| hypothetical protein PRUPE_ppa007422mg [Prunus persica]
          Length = 368

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
 Frame = -1

Query: 288 RKMIVEEVARVLNYGDLKAKIEAARDVRRLVRKSSSA--NSKSAVRCGFAAAGVIEPLVS 115
           ++ ++ E++  L +GDL+AKIEAARD+R LVRKSSS+  +S S  R    AAGVI PLV 
Sbjct: 34  KQTLILEISSKLIHGDLEAKIEAARDIRNLVRKSSSSSPSSSSKTRSKLGAAGVISPLVL 93

Query: 114 MLHSSFP 94
           ML S  P
Sbjct: 94  MLCSPNP 100


>ref|XP_004303582.1| PREDICTED: U-box domain-containing protein 3-like isoform 2
           [Fragaria vesca subsp. vesca]
          Length = 389

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
 Frame = -1

Query: 294 WSRKM--IVEEVARVLNYGDLKAKIEAARDVRRLVRKSSSANSKSA--VRCGFAAAGVIE 127
           WS++   +V E++  L  GDL AKIEAARD+R LVRKSSS++S S+   R    A+GVI 
Sbjct: 27  WSQRKQTLVLEISSKLINGDLDAKIEAARDIRNLVRKSSSSSSSSSAKTRLKLGASGVIP 86

Query: 126 PLVSMLHSSFP 94
           PLV+ML S  P
Sbjct: 87  PLVTMLVSPNP 97


>ref|XP_004303581.1| PREDICTED: U-box domain-containing protein 3-like isoform 1
           [Fragaria vesca subsp. vesca]
          Length = 414

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
 Frame = -1

Query: 294 WSRKM--IVEEVARVLNYGDLKAKIEAARDVRRLVRKSSSANSKSA--VRCGFAAAGVIE 127
           WS++   +V E++  L  GDL AKIEAARD+R LVRKSSS++S S+   R    A+GVI 
Sbjct: 27  WSQRKQTLVLEISSKLINGDLDAKIEAARDIRNLVRKSSSSSSSSSAKTRLKLGASGVIP 86

Query: 126 PLVSMLHSSFP 94
           PLV+ML S  P
Sbjct: 87  PLVTMLVSPNP 97


>gb|ESW13361.1| hypothetical protein PHAVU_008G189800g [Phaseolus vulgaris]
          Length = 378

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/57 (59%), Positives = 44/57 (77%)
 Frame = -1

Query: 270 EVARVLNYGDLKAKIEAARDVRRLVRKSSSANSKSAVRCGFAAAGVIEPLVSMLHSS 100
           E++  L YG+L AKIEAAR++R++VRKSSS+   S +R   A+AGVIEPLV ML SS
Sbjct: 31  ELSEKLLYGNLSAKIEAAREIRKMVRKSSSS---SKIRAKLASAGVIEPLVLMLSSS 84


>ref|XP_002532213.1| Vacuolar protein, putative [Ricinus communis]
           gi|223528109|gb|EEF30182.1| Vacuolar protein, putative
           [Ricinus communis]
          Length = 391

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/63 (50%), Positives = 47/63 (74%)
 Frame = -1

Query: 288 RKMIVEEVARVLNYGDLKAKIEAARDVRRLVRKSSSANSKSAVRCGFAAAGVIEPLVSML 109
           ++ ++++V+  L  GDL  +I+AA+D+R+LVRKSSS+   +  R  FAAAGVI+PLV ML
Sbjct: 38  KETLIQQVSERLKKGDLNTQIQAAKDLRKLVRKSSSS---TKTRSKFAAAGVIQPLVFML 94

Query: 108 HSS 100
            SS
Sbjct: 95  FSS 97


>gb|EOX93564.1| ARM repeat superfamily protein [Theobroma cacao]
          Length = 387

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
 Frame = -1

Query: 318 SKGTPPPPWS--RKMIVEEVARVLNYGDLKAKIEAARDVRRLVRKSSSANSKSAVRCGFA 145
           SK      W+  ++ ++ E++  L  GDL+AKIEAARD+RR+VRKS+        R  FA
Sbjct: 23  SKDQEEETWNHQKQTLILELSEKLINGDLQAKIEAARDIRRVVRKST-----VKTRSKFA 77

Query: 144 AAGVIEPLVSMLHS 103
           AAGVI+PLV ML S
Sbjct: 78  AAGVIQPLVFMLLS 91


>ref|XP_003519236.1| PREDICTED: U-box domain-containing protein 3-like [Glycine max]
          Length = 381

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/54 (59%), Positives = 41/54 (75%)
 Frame = -1

Query: 261 RVLNYGDLKAKIEAARDVRRLVRKSSSANSKSAVRCGFAAAGVIEPLVSMLHSS 100
           +++N  +L AKIEAAR++R++VRKSSS+   S  R   AAAGVIEPLV ML SS
Sbjct: 38  KLINGNNLSAKIEAAREIRKMVRKSSSS---SKTRAKLAAAGVIEPLVLMLSSS 88


>ref|XP_006447834.1| hypothetical protein CICLE_v10015636mg [Citrus clementina]
           gi|568830268|ref|XP_006469423.1| PREDICTED: U-box
           domain-containing protein 3-like [Citrus sinensis]
           gi|557550445|gb|ESR61074.1| hypothetical protein
           CICLE_v10015636mg [Citrus clementina]
          Length = 375

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = -1

Query: 288 RKMIVEEVARVLNYGDLKAKIEAARDVRRLVRKSSSANSKSAVRCGFAAAGVIEPLVSML 109
           ++ ++EE++  L  GDL+ KIEAARD+R++V+KSS        R  FAAAGV++PLV ML
Sbjct: 23  KQALIEELSDKLINGDLETKIEAARDIRKVVKKSS-----LKTRSEFAAAGVVQPLVLML 77

Query: 108 HS 103
            S
Sbjct: 78  VS 79


>gb|EXB34465.1| U-box domain-containing protein 3 [Morus notabilis]
          Length = 411

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 20/85 (23%)
 Frame = -1

Query: 288 RKMIVEEVARVLNYGDLKAKIEAARDVRRLVRK--------------------SSSANSK 169
           ++ ++ E++  L +GDL+AKIEAARD+RRLVR+                    SSS++S 
Sbjct: 33  KQNLIMEISSKLIHGDLEAKIEAARDIRRLVRRSATTISSSSCYSLSYSSSPCSSSSSSS 92

Query: 168 SAVRCGFAAAGVIEPLVSMLHSSFP 94
              R    AAGVI+PLV ML S  P
Sbjct: 93  CKTRSKLGAAGVIQPLVLMLVSPNP 117


>ref|XP_003615542.1| U-box domain-containing protein [Medicago truncatula]
           gi|355516877|gb|AES98500.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 350

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/70 (42%), Positives = 42/70 (60%)
 Frame = -1

Query: 309 TPPPPWSRKMIVEEVARVLNYGDLKAKIEAARDVRRLVRKSSSANSKSAVRCGFAAAGVI 130
           T    W +   ++ ++  L  G+L  KIEAAR++RR+VRKSS   SK       A +GVI
Sbjct: 23  TTTTTWKQNQTLQTLSEKLTNGNLNTKIEAAREIRRMVRKSSKTRSK------LADSGVI 76

Query: 129 EPLVSMLHSS 100
           +PL+ ML SS
Sbjct: 77  QPLIFMLSSS 86


Top