BLASTX nr result
ID: Rehmannia26_contig00016303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00016303
(965 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 103 1e-19
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 80 9e-13
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616... 80 2e-12
ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutr... 78 6e-12
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 78 6e-12
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 78 6e-12
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 77 1e-11
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 77 1e-11
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ... 77 1e-11
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 76 2e-11
gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus pe... 76 2e-11
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia... 76 2e-11
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 76 2e-11
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 76 2e-11
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 75 5e-11
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 75 5e-11
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [... 74 6e-11
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ... 74 6e-11
ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thalia... 74 6e-11
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 74 6e-11
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 103 bits (257), Expect = 1e-19
Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
Frame = -2
Query: 964 GVMSVKSVY-GVLMKDKIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKCYNDI 788
G +V+S Y L++D+ G + G NL + WK + K+K F WK ++
Sbjct: 1020 GQFTVRSAYYHELLEDRKTGPSTSRGP-----NLKLWQKIWKAKIPPKVKLFSWKAIHNG 1074
Query: 787 LPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQ-WEGMIEGAVTF 611
L V ++KRGM IDG CGE EET EHL + C+ + R W +SP++ G IE A +F
Sbjct: 1075 LAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIE-AGSF 1133
Query: 610 KGWWSNLCNA-QFSQWFEDRLQLTTYMLWWMWKTRNLWIFKKKRMAEIYIVEGAVREWKE 434
+ W +L + + ++W+ L + W +W RN W+F+KK++A +VE AVR E
Sbjct: 1134 RIWVESLLDTHKDTEWW----ALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVME 1189
Query: 433 FQE 425
F+E
Sbjct: 1190 FEE 1192
>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 80.5 bits (197), Expect = 9e-13
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Frame = -2
Query: 964 GVMSVKSVYGVLMKDKIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKCYNDIL 785
G SVK Y + +G + I +L T+ WKL + K+K FLWK + +
Sbjct: 858 GDYSVKLGYWLASNQNLGQVAIEAMMQPSLNDLKTQ--VWKLQTEPKIKVFLWKVLSGAI 915
Query: 784 PVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWEGM-IEGAVTFK 608
PV L RGM +D Q CG E+++H+ FSC ++ W +S I + E +
Sbjct: 916 PVVDLLSYRGMKLDSRCQTCGCEGESIQHVLFSCSFPRQVWAMSNIHVPLLGFECGSVYA 975
Query: 607 GWWSNLCNAQFSQWFEDRLQLTTYMLWWMWKTRNLWIFKKKR---MAEIYIVEGAVREWK 437
+ L N +W + + +++W +WK RNL+ F+ KR + I V V +W
Sbjct: 976 NLYHFLINRDNLKWPVELRRSFPWIIWRIWKNRNLFFFEGKRFTVLETILKVRKDVEDWF 1035
Query: 436 EFQEVRKK 413
Q V K+
Sbjct: 1036 AAQVVEKE 1043
>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
Length = 510
Score = 79.7 bits (195), Expect = 2e-12
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Frame = -2
Query: 847 WKLGVKGKLKHFLWKCYNDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQR 668
WKL V K+KHF+W ++LP L++ + + + +C +E + H +C A+
Sbjct: 200 WKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVAHCLVNCSFAKS 259
Query: 667 CWKLSPIQWEGMIEGAVTFKGWWSNLCNAQFSQWFEDRLQLTTYMLWWMWKTRN--LWIF 494
CW LSPI G + G F W + FS++ D L W +W+ +N +W
Sbjct: 260 CWLLSPI---GYVGGCENFMDWLEGI----FSRYSSDDCDLAAMTCWSLWENKNAKVWKN 312
Query: 493 KKKRMAEIYIVEGAVR-EWKEFQEVR 419
+K R++ + + G V +WK ++++
Sbjct: 313 RKGRLSSVLNLAGQVLFQWKSVRKLQ 338
>ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutrema salsugineum]
gi|557106756|gb|ESQ47071.1| hypothetical protein
EUTSA_v10028075mg [Eutrema salsugineum]
Length = 343
Score = 77.8 bits (190), Expect = 6e-12
Identities = 48/187 (25%), Positives = 84/187 (44%)
Frame = -2
Query: 964 GVMSVKSVYGVLMKDKIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKCYNDIL 785
G SV+S YG L ++E + ++N + WKL K+K FLW+ +
Sbjct: 35 GKYSVRSGYG---------LSVSETIPERQRNFNWQKNIWKLQTVPKVKQFLWRAVVEAF 85
Query: 784 PVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWEGMIEGAVTFKG 605
PV V L +RG+ +D ++CG ET+ H+ C+ A++ W L+P++ + + +
Sbjct: 86 PVGVELVRRGIQVDFACKICGN-PETITHVLRDCQLARKVWNLAPLRTQSHLNTVLCLDF 144
Query: 604 WWSNLCNAQFSQWFEDRLQLTTYMLWWMWKTRNLWIFKKKRMAEIYIVEGAVREWKEFQE 425
L L ++ W +W RN IF + I+ A+ + + +QE
Sbjct: 145 LAHILSMVSLPPIEVSTTSLPAWICWNLWTPRNHRIFSDTTYSAYEIITKAICDARAWQE 204
Query: 424 VRKKLTK 404
+ L K
Sbjct: 205 AQSSLRK 211
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 77.8 bits (190), Expect = 6e-12
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Frame = -2
Query: 964 GVMSVKSVY-----GVLMKDKIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKC 800
G+ SVKS Y G L + K G ++ GS + + + WK+ + GK+KHF+W+
Sbjct: 247 GLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYW---KKVWKMQLPGKVKHFIWRF 303
Query: 799 YNDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWEGMIEGA 620
++IL + V LQ+RGM +D +C E HLFF C++ ++ W+ + ++ ++
Sbjct: 304 SHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKVKKVWQENNLE---ILRQE 360
Query: 619 VTFKGWWSNLCNAQFSQWFEDRLQLTTYMLWWMWKTRN 506
+ K + F++ ++ L L + LW W RN
Sbjct: 361 LAEKRSGREVMETVFNRPAKEIL-LASITLWQWWSERN 397
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 77.8 bits (190), Expect = 6e-12
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Frame = -2
Query: 964 GVMSVKSVY-----GVLMKDKIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKC 800
G+ SVKS Y G L + K G ++ GS + + + WK+ + GK+KHF+W+
Sbjct: 1140 GLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYW---KKVWKMQLPGKVKHFIWRF 1196
Query: 799 YNDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWEGMIEGA 620
++IL + V LQ+RGM +D +C E HLFF C++ ++ W+ + ++ ++
Sbjct: 1197 SHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKVKKVWQENNLE---ILRQE 1253
Query: 619 VTFKGWWSNLCNAQFSQWFEDRLQLTTYMLWWMWKTRN 506
+ K + F++ ++ L L + LW W RN
Sbjct: 1254 LAEKRSGREVMETVFNRPAKEIL-LASITLWQWWSERN 1290
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 76.6 bits (187), Expect = 1e-11
Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Frame = -2
Query: 847 WKLGVKGKLKHFLWKCYNDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQR 668
W+ K+K F+WK + L VNV ++RG+ +CGE +ETL+HLF C A+
Sbjct: 1041 WRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEA 1100
Query: 667 CWKLSPIQWEGMIEGAVTFKGWWSNLCNAQFSQWFEDRLQLT-TYMLWWMWKTRNLWIFK 491
CW + + W C++Q + L Y+LW +WK RN +F
Sbjct: 1101 CWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYSTNWSLIFPYILWNLWKARNRLVFD 1160
Query: 490 KKRMAEIYIVEGAVREWKEFQEVRKKLTKM*GL 392
A I+ R + E E R L K GL
Sbjct: 1161 NNITAPSDILN---RSFMESSEARCLLAKRTGL 1190
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 76.6 bits (187), Expect = 1e-11
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Frame = -2
Query: 847 WKLGVKGKLKHFLWKCYNDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQR 668
WK+ K KHF W+C + L N L R + + + CG EE++ HL F C +++
Sbjct: 927 WKIKTTRKFKHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQ 986
Query: 667 CWKLSPI-QWEGMIEGAVTFKGWWSNLCNAQFSQWFEDRLQLTTYMLWWMWKTRNLWIFK 491
W LSPI E + F + L + ED +++ ++LW++WK+RN +IF+
Sbjct: 987 IWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFE 1046
Query: 490 KKRMAEIYIVEGAVRE---WKE 434
+ I++ A++E WK+
Sbjct: 1047 NVIESPQVILDFAIQEANVWKQ 1068
>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|3184275|gb|AAC18922.1| putative reverse transcriptase
[Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
H domain-containing protein [Arabidopsis thaliana]
Length = 365
Score = 76.6 bits (187), Expect = 1e-11
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = -2
Query: 847 WKLGVKGKLKHFLWKCYNDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQR 668
WKL V K+KHFLW+C L N L+ R + D I Q C EET+ H+ F+C Q
Sbjct: 38 WKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQS 97
Query: 667 CWKLSPIQWEGMIEGAVTFKGWWSNLCNAQFSQWFE--DRLQLTTYMLWWMWKTRNLWIF 494
W+ + I +F+ + L +Q DR L +++W +WK+RN+++F
Sbjct: 98 VWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRF-LPFWIMWRLWKSRNVFLF 156
Query: 493 KKKRMAEIYIVEGAVREWKEF 431
++K + Y +++ E+
Sbjct: 157 QQKCQSPDYEARKGIQDATEW 177
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 76.3 bits (186), Expect = 2e-11
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Frame = -2
Query: 964 GVMSVKSVYGVLMKDKIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKCYNDIL 785
GV +V+S Y +L LDI S+ N+ W+L V K+KHF+W+ D+L
Sbjct: 100 GVYTVRSSYKMLAPC----LDIPSSSI--------WNQLWRLEVPSKVKHFMWRALTDVL 147
Query: 784 PVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWEGMIEGAVTFKG 605
P L K+ + + C + E++ H+ C A+ CW S ++ F G
Sbjct: 148 PTTENLLKKYVEVPPACITCHASSESICHILLQCPFARTCWMTS----------SIGFFG 197
Query: 604 WWSNL---CNAQFSQWFEDRLQLTTYMLWWMWKTRNLWIFKKKRMAEIYIVEGAVREWKE 434
SNL A F+++ ++ QL + W +W+ RN +++ K ++ A +
Sbjct: 198 DGSNLLLWLEALFNRYSLEQTQLAVMICWSLWQNRNDMVWRGKTSGVQQLLNSAGHFLFQ 257
Query: 433 FQEVRKKLTKM*GLYL*W*DKISALEFCHFLSSTLVCFTLLLMCWRPPVCG 281
+Q VRK+ FL S +CW PPV G
Sbjct: 258 WQLVRKQ---------------------QFLFSQPSPIGHGAICWEPPVAG 287
>gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus persica]
Length = 378
Score = 76.3 bits (186), Expect = 2e-11
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Frame = -2
Query: 964 GVMSVKSVYGVLMKDKIGGLDIAEGSLDHKKNLCTRNRSWK----LGVKGKLKHFLWKCY 797
G +VKS Y + +K + G+ I + N ++ WK L V K++ F+W+CY
Sbjct: 171 GGYTVKSGYDLAIKLRRNGV-IGKKGKGECSNQSGQSGPWKHIWALQVPPKIQMFIWRCY 229
Query: 796 NDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWE-GMIEGA 620
++L V L++R + ++ LCG +T HLFF CE A+ W SP + +EG
Sbjct: 230 RNVLAVRENLRRRRVDVEADCLLCGNNGKTEVHLFFRCEIARLFWFASPSHLDVHGVEGE 289
Query: 619 VTFKGWWSNLCNAQFSQWFEDRLQLTTYMLWWMWKTRNLWIFKKKRMAEIYIVEG---AV 449
W L + ++ LQ+ + LW +WK RN +F+++ + + + G +
Sbjct: 290 DFLSCWECLLQKFAQVEKMDEILQIVAFGLWRIWKWRNAVVFERQSLDPMDLGRGVGWVI 349
Query: 448 R-EWKE 434
R EW E
Sbjct: 350 RTEWGE 355
>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
thaliana] gi|7269807|emb|CAB79667.1| putative protein
[Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
putative reverse transcriptase/RNA-dependent DNA
polymerase [Arabidopsis thaliana]
gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 575
Score = 76.3 bits (186), Expect = 2e-11
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Frame = -2
Query: 964 GVMSVKSVYGVL---MKDKIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKCYN 794
G +VKS Y VL + + +++E SL+ + WK K++HFLWKC +
Sbjct: 221 GDYTVKSGYWVLTQIINKRSSPQEVSEPSLNP-----IYQKIWKSQTSPKIQHFLWKCLS 275
Query: 793 DILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLS--PIQWEGMIEGA 620
+ LPV L R + + C +ET+ HL F C A+ W +S PI G +
Sbjct: 276 NSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADS 335
Query: 619 VTFKGWW-SNLCNAQFSQWFEDRLQLTTYMLWWMWKTRNLWIFKKKRMAEIYIV---EGA 452
+ +W NL N QW E QL ++LW +WK RN +F+ + ++ E
Sbjct: 336 IYVNLYWVFNLGNGN-PQW-EKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDD 393
Query: 451 VREWKEFQEVRKKLTK 404
+ EW+ E TK
Sbjct: 394 LEEWRIRTEAESCGTK 409
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 75.9 bits (185), Expect = 2e-11
Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Frame = -2
Query: 847 WKLGVKGKLKHFLWKCYNDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQR 668
W+ K+K F+WK + L VNV ++RG+ +CGE +ETL+HLF C A+
Sbjct: 1573 WRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEA 1632
Query: 667 CWKLSPIQWEGMIEGAVTFKGWWSNLCNAQFSQWFEDRLQLT-TYMLWWMWKTRNLWIFK 491
CW + + W C++Q + L Y+LW +WK RN +F
Sbjct: 1633 CWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVFD 1692
Query: 490 KKRMAEIYIVEGAVREWKEFQEVRKKLTKM*GL 392
A I+ R + E E R L K GL
Sbjct: 1693 NNITAPSDILN---RSFMESSEARCLLAKRTGL 1722
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 75.9 bits (185), Expect = 2e-11
Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Frame = -2
Query: 847 WKLGVKGKLKHFLWKCYNDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQR 668
W+ K+K F+WK + L VNV ++RG+ +CGE +ETL+HLF C A+
Sbjct: 1041 WRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEA 1100
Query: 667 CWKLSPIQWEGMIEGAVTFKGWWSNLCNAQFSQWFEDRLQLT-TYMLWWMWKTRNLWIFK 491
CW + + W C++Q + L Y+LW +WK RN +F
Sbjct: 1101 CWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVFD 1160
Query: 490 KKRMAEIYIVEGAVREWKEFQEVRKKLTKM*GL 392
A I+ R + E E R L K GL
Sbjct: 1161 NNITAPSDILN---RSFMESSEARCLLAKRTGL 1190
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 74.7 bits (182), Expect = 5e-11
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Frame = -2
Query: 907 LDIAEGSLDHKKNLCT-RNRSWKLGVKGKLKHFLWKCYNDILPVNVTLQKRGMVIDGIYQ 731
LD+ EG+ +L T + WK+ KL+HFLW+ + +PV+ L+KRG++ D
Sbjct: 808 LDLNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCV 867
Query: 730 LCGEAEETLEHLFFSCERAQRCWKLSPIQWEGMIEGAVTFKGWWSNLCNAQFSQWFEDRL 551
CG +EE++ H F C A++ W LS I G ++NL + +
Sbjct: 868 SCGASEESINHTLFQCHPARQIWALSQIP---TAPGIFPSNSIFTNLDHLFWRIPSGVDS 924
Query: 550 QLTTYMLWWMWKTRNLWIFKKKRMAEIYIVEGAVREWKEFQEVRKKL 410
+++W++WK RN +F+ + I+ AV+E + +QE + +L
Sbjct: 925 APYPWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQEAQVEL 971
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 74.7 bits (182), Expect = 5e-11
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 10/194 (5%)
Frame = -2
Query: 964 GVMSVKSVYGVLMKD---KIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKCYN 794
G +V+S Y +L D I ++ GS+D K R W L + KLKHFLW+ +
Sbjct: 1167 GEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLK------TRIWNLPIMPKLKHFLWRALS 1220
Query: 793 DILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWEGMIEGAVT 614
L L RGM ID I C E++ H F+C A W LS +I +
Sbjct: 1221 QALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFATMAWWLSD---SSLIRNQLM 1277
Query: 613 FKGWWSNLCN----AQFSQWFEDRLQLTTYMLWWMWKTRNLWIFKKKRMA---EIYIVEG 455
+ N+ N Q + + L +++W +WK RN +F K R + + +
Sbjct: 1278 SNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKA 1337
Query: 454 AVREWKEFQEVRKK 413
+W + KK
Sbjct: 1338 ETHDWLNATQSHKK 1351
>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 74.3 bits (181), Expect = 6e-11
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Frame = -2
Query: 964 GVMSVKSVYG--VLMKDKIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKCYND 791
G+ SVKS Y V+ IGG + + ++ W K+K FLW+
Sbjct: 571 GLYSVKSGYNLQVVSASYIGGYNRSSHVIERG----VWKDIWASPTLPKVKFFLWRMMVR 626
Query: 790 ILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWEGMIEGAVTF 611
LP + L +R ++ +C + EE+ EH F C Q W SP+ + + TF
Sbjct: 627 ALPTKLNLYRRRIISSPFCPICNQYEESEEHAIFLCPWTQAVWFGSPLNYRVNPQSITTF 686
Query: 610 KGWWSNLCNAQFSQWFED--RLQLTTYMLWWMWKTRNLWIFKKKRMAEIYIVEGAVREWK 437
W++ L N+Q E L L +++ W +WK R ++F+ + +VE A +
Sbjct: 687 DRWFTGLLNSQMFSKSERVWVLSLVSFISWEIWKARCKFLFEDITIDPRCVVERAASAAE 746
Query: 436 EFQEVRK 416
EF +R+
Sbjct: 747 EFDVLRR 753
>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
reverse transcriptase [Arabidopsis thaliana]
gi|332641254|gb|AEE74775.1| RNase H domain-containing
protein [Arabidopsis thaliana]
Length = 484
Score = 74.3 bits (181), Expect = 6e-11
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 10/194 (5%)
Frame = -2
Query: 964 GVMSVKSVYGVLMKD---KIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKCYN 794
G +V+S Y +L D I ++ GS+D K R W L + KLKHFLW+ +
Sbjct: 127 GEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLK------TRIWNLPIMPKLKHFLWRALS 180
Query: 793 DILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWEGMIEGAVT 614
L L RGM ID C E++ H F+C A W+LS +I +
Sbjct: 181 QALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSD---SSLIRNQLM 237
Query: 613 FKGWWSNLCN----AQFSQWFEDRLQLTTYMLWWMWKTRNLWIFKKKRMA---EIYIVEG 455
+ N+ N Q + + L +++W +WK RN +F K R + + +
Sbjct: 238 SNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKA 297
Query: 454 AVREWKEFQEVRKK 413
+W + KK
Sbjct: 298 ETHDWLNATQSHKK 311
>ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
protein [Arabidopsis thaliana]
gi|332643482|gb|AEE77003.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 343
Score = 74.3 bits (181), Expect = 6e-11
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Frame = -2
Query: 847 WKLGVKGKLKHFLWKCYNDILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQR 668
WKL K+KHFLWK + L L++R + C + +ET +HLFF C AQ+
Sbjct: 19 WKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQQ 78
Query: 667 CWKLSPIQWEGMIEGAVTFKGWWSNLCNAQFSQWFEDRLQLTTYMLWWMWKTRNLWIFKK 488
W+ S I + + +T + L ++ + L ++LW +WK+RN +F++
Sbjct: 79 VWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQQ 138
Query: 487 KRMAEIYIVEGA---VREWKE 434
K ++ ++ A V+EW++
Sbjct: 139 KSISWQNTLQRARNDVQEWED 159
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 74.3 bits (181), Expect = 6e-11
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 10/194 (5%)
Frame = -2
Query: 964 GVMSVKSVYGVLMKD---KIGGLDIAEGSLDHKKNLCTRNRSWKLGVKGKLKHFLWKCYN 794
G +V+S Y +L D I ++ GS+D K R W L + KLKHFLW+ +
Sbjct: 1393 GEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLK------TRIWNLPIMPKLKHFLWRALS 1446
Query: 793 DILPVNVTLQKRGMVIDGIYQLCGEAEETLEHLFFSCERAQRCWKLSPIQWEGMIEGAVT 614
L L RGM ID C E++ H F+C A W+LS +I +
Sbjct: 1447 QALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSD---SSLIRNQLM 1503
Query: 613 FKGWWSNLCN----AQFSQWFEDRLQLTTYMLWWMWKTRNLWIFKKKRMA---EIYIVEG 455
+ N+ N Q + + L +++W +WK RN +F K R + + +
Sbjct: 1504 SNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKA 1563
Query: 454 AVREWKEFQEVRKK 413
+W + KK
Sbjct: 1564 ETHDWLNATQSHKK 1577