BLASTX nr result
ID: Rehmannia26_contig00016141
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00016141
(606 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 99 7e-19
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 92 1e-16
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 84 2e-14
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 82 1e-13
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom... 75 1e-11
gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlise... 75 1e-11
emb|CAD20832.1| sigma factor [Spinacia oleracea] 74 3e-11
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 74 4e-11
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 74 4e-11
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe... 72 1e-10
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 69 8e-10
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr... 69 8e-10
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 69 8e-10
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr... 69 8e-10
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr... 69 8e-10
ref|XP_006450755.1| hypothetical protein CICLE_v10007968mg [Citr... 69 8e-10
ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-... 69 8e-10
ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC ... 69 1e-09
ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC ... 69 1e-09
ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC ... 69 1e-09
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 99.4 bits (246), Expect = 7e-19
Identities = 67/161 (41%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETL-NDT 303
MGFRLNLKW S +G+++S+ R S S+ + E+L D
Sbjct: 3 MGFRLNLKWD-FPISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYKDP 61
Query: 302 SRAHVCSSSP-QLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 126
+ CSS Q EN Y KM +GK S L+ ++ N Q +D A + LQ
Sbjct: 62 FKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIV-NASQAPIGEDISASVAGLQ 120
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
A++ASQF LL++NLDILE+MF+DSN VRLERDI+ QL RLG
Sbjct: 121 ASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLG 161
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 92.0 bits (227), Expect = 1e-16
Identities = 57/130 (43%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Frame = -2
Query: 386 RGRDSSYFLVRLSAASILYGEAETL-NDTSRAHVCSSSP-QLLENYYLGTRESKMALGKG 213
+G+++S+ R S S+ + E+L D + CSS Q EN Y KM +GK
Sbjct: 83 QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 142
Query: 212 SSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 33
S L+ ++ N Q +D A + LQA++ASQF LL++NLDILE+MF+DSN VRLER
Sbjct: 143 SHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 201
Query: 32 DILEQLERLG 3
DI+ QL RLG
Sbjct: 202 DIMVQLGRLG 211
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 84.3 bits (207), Expect = 2e-14
Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAE-TLNDT 303
MGFRL+LKWG S +GR++ Y R S + G+ E + +D
Sbjct: 1 MGFRLHLKWG-FSVQPPFSSNSSSWPSSHSFKGREALYDPAR-SLKPFITGDCEPSHSDP 58
Query: 302 SRAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLL-DNDIQTSNNKDKLAYLTSLQ 126
R C S PQL + T E K G+GS +Y + + I S + +K YL +
Sbjct: 59 FRVQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNT-- 116
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
T++ F LLMKNLD+LE+MF+DS RLERDIL QLE+LG
Sbjct: 117 -TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLG 156
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 82.0 bits (201), Expect = 1e-13
Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAE-TLNDT 303
MGFRL+LKWG S +GR++ Y R S + G+ E + +D
Sbjct: 1 MGFRLHLKWG-FSLQPPFSSNSSSWPSSHSFKGRETLYDPAR-SLKPFINGDCEPSHSDP 58
Query: 302 SRAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSN-NKDKLAYLTSLQ 126
R C S PQL + T E+K G+GS +Y DI + + +K YL +
Sbjct: 59 FRVQTCLSDPQLWTSDASVTTETKTRNGRGSPSNVYG----DIGSYKIDGEKPTYLNT-- 112
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
T++ F LLMKNLD+LE+MF+DS RLERDIL QLE+LG
Sbjct: 113 -TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLG 152
>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
Length = 848
Score = 75.5 bits (184), Expect = 1e-11
Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Frame = -2
Query: 371 SYFLV----RLSAASILYGEAETLNDTSRAHVCSSSPQLLENYYLGTRESKMALGKGSSD 204
S+FL RL ++ +L +L D +A+ S++PQ LE L E K+ +GKGS
Sbjct: 327 SHFLANSPSRLPSSGVL-----SLKDPLKAYASSAAPQTLEKGCLEIEEMKVNIGKGSQA 381
Query: 203 GLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDI 27
+SL D DK + TS QA +AS + LLM+NLD+LE+ F+DS+ + LER+I
Sbjct: 382 HSHSLTMIDKTHELIGGDKSSSRTSPQACKASHYSLLMENLDVLEETFADSDVLTLEREI 441
Query: 26 LEQLERLG 3
L QL R G
Sbjct: 442 LLQLGRFG 449
>gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlisea aurea]
Length = 463
Score = 75.1 bits (183), Expect = 1e-11
Identities = 42/72 (58%), Positives = 49/72 (68%)
Frame = -2
Query: 218 KGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRL 39
K SSD Y D I N+D + Y +S A + S+F LLMKNLD LE+MFSDS AVRL
Sbjct: 8 KESSDDAY---DRSIGIPKNEDDMTYFSSSNAVKTSRFVLLMKNLDTLENMFSDSYAVRL 64
Query: 38 ERDILEQLERLG 3
E DILEQL+RLG
Sbjct: 65 EDDILEQLQRLG 76
>emb|CAD20832.1| sigma factor [Spinacia oleracea]
Length = 548
Score = 73.9 bits (180), Expect = 3e-11
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = -2
Query: 386 RGRDSSYFLVRLSAASILYGEAETLN-DTSRAHVCSSS-PQLLENYYLGTRESKMALGKG 213
RG++ + RLS +I + E+ETL DT R H SSS P +EN Y + + K
Sbjct: 34 RGKELDFGSARLSLLTIGFDESETLRKDTLRPHAGSSSVPLTVENDYSNLETT---ISKR 90
Query: 212 SSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 33
S L S D + +++D Y+ S+Q+ AS F LM N+++LE+ SDS ++LE+
Sbjct: 91 SCKDLIS----DTEVLSDRDVSVYVRSVQSCSASHFHTLMANINLLENKVSDSELLKLEK 146
Query: 32 DILEQLERLG 3
DIL QL RLG
Sbjct: 147 DILVQLGRLG 156
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 73.6 bits (179), Expect = 4e-11
Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETLN-DT 303
+GFRLNLK G S RGR+ S+ LS S++ E ET + D
Sbjct: 3 LGFRLNLKCGFPIHNSHWQTNSPSKLPSSSVRGREGSFSSAGLSFLSVISEECETSSKDP 62
Query: 302 SRAHVC-SSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 126
+ + C S+SPQLL++ L E KM + S G +++D DK S
Sbjct: 63 LKVYTCPSASPQLLDDG-LSEMEEKMNPRRMSKSGSANMID---------DKEYSFMSSA 112
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
+ S + LL++NL++LE+ F+DS +LE++IL QL RLG
Sbjct: 113 GLRTSHYTLLLQNLNVLEETFADSGVSKLEKEILLQLGRLG 153
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 73.6 bits (179), Expect = 4e-11
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETLNDTS 300
+GFRL KWG RG ++S RLS S++ E + LN S
Sbjct: 3 VGFRLTPKWGSPMQSHSATNSTSMFSSFS-ARGMEASVNQARLSFLSVVSEEGDILNKHS 61
Query: 299 -RAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQA 123
++ CSS+ Q +EN L KM + K S + +++ ND + S ++ T L+
Sbjct: 62 FKSFACSSAAQNVENDCLQMERLKMNVDKTSHVSINNMMGND-KVSVEEEISTSHTRLRE 120
Query: 122 TQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
S+ L+ NLD LE + +D +A++LERDIL QL RLG
Sbjct: 121 RMTSRISFLLDNLDTLEKLVADLDALKLERDILLQLGRLG 160
>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 72.0 bits (175), Expect = 1e-10
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILY--GEAETLND 306
+GFRLNLK G S RGR+ S+ RLS S++ GEA + +
Sbjct: 3 LGFRLNLKCGFPVHSSHWQTTSPSKISSTSVRGREGSFNSARLSFLSVISEEGEASSKDP 62
Query: 305 TSRAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTS-- 132
S+SPQ+LE+ E K A + S DN + + K +++S
Sbjct: 63 LKVYTFPSASPQILEDGVSELEEVKTAFRRVPK----SFSDNQMPVAEGK----FISSKG 114
Query: 131 LQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
L+A AS F LL++NL++LE+ F+ S+ ++LE++IL QL RLG
Sbjct: 115 LEACTASHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLG 157
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 69.3 bits (168), Expect = 8e-10
Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGE-AETLNDT 303
MGFRLNLKW RGR+ S+ RLS S + + A D
Sbjct: 3 MGFRLNLKWVSPVQSHFFTTSSCRLSSTSV-RGREGSFNSARLSFLSTISEDSASYFQDP 61
Query: 302 SRAHVCSS-SPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 126
+A+ CS + Q +EN Y T E + K
Sbjct: 62 VKAYTCSFVNTQTVENDYSETEEIRQ-------------------------KSTSCIGQD 96
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
A+ S F+LLM+NLD+LE F+DS+A+RLER+IL+QL +LG
Sbjct: 97 ASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLG 137
>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553990|gb|ESR64004.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 442
Score = 69.3 bits (168), Expect = 8e-10
Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGE-AETLNDT 303
MGFRLNLKW RGR+ S+ RLS S + + A D
Sbjct: 3 MGFRLNLKWVSPVQSHFFTTSSCRLSSTSV-RGREGSFNSARLSFLSTISEDSASYFQDP 61
Query: 302 SRAHVCSS-SPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 126
+A+ CS + Q +EN Y T E + K
Sbjct: 62 VKAYTCSFVNTQTVENDYSETEEIRQ-------------------------KSTSCIGQD 96
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
A+ S F+LLM+NLD+LE F+DS+A+RLER+IL+QL +LG
Sbjct: 97 ASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLG 137
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 69.3 bits (168), Expect = 8e-10
Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGE-AETLNDT 303
MGFRLNLKW RGR+ S+ RLS S + + A D
Sbjct: 3 MGFRLNLKWVSPVQSHFFTTSSCRLSSTSV-RGREGSFNSARLSFLSTISEDSASYFQDP 61
Query: 302 SRAHVCSS-SPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 126
+A+ CS + Q +EN Y T E + K
Sbjct: 62 VKAYTCSFVNTQTVENDYSETEEIRQ-------------------------KSTSCIGQD 96
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
A+ S F+LLM+NLD+LE F+DS+A+RLER+IL+QL +LG
Sbjct: 97 ASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLG 137
>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917506|ref|XP_006450759.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553984|gb|ESR63998.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553985|gb|ESR63999.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 383
Score = 69.3 bits (168), Expect = 8e-10
Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGE-AETLNDT 303
MGFRLNLKW RGR+ S+ RLS S + + A D
Sbjct: 3 MGFRLNLKWVSPVQSHFFTTSSCRLSSTSV-RGREGSFNSARLSFLSTISEDSASYFQDP 61
Query: 302 SRAHVCSS-SPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 126
+A+ CS + Q +EN Y T E + K
Sbjct: 62 VKAYTCSFVNTQTVENDYSETEEIRQ-------------------------KSTSCIGQD 96
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
A+ S F+LLM+NLD+LE F+DS+A+RLER+IL+QL +LG
Sbjct: 97 ASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLG 137
>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917512|ref|XP_006450762.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553983|gb|ESR63997.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553988|gb|ESR64002.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 381
Score = 69.3 bits (168), Expect = 8e-10
Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGE-AETLNDT 303
MGFRLNLKW RGR+ S+ RLS S + + A D
Sbjct: 3 MGFRLNLKWVSPVQSHFFTTSSCRLSSTSV-RGREGSFNSARLSFLSTISEDSASYFQDP 61
Query: 302 SRAHVCSS-SPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 126
+A+ CS + Q +EN Y T E + K
Sbjct: 62 VKAYTCSFVNTQTVENDYSETEEIRQ-------------------------KSTSCIGQD 96
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
A+ S F+LLM+NLD+LE F+DS+A+RLER+IL+QL +LG
Sbjct: 97 ASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLG 137
>ref|XP_006450755.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917500|ref|XP_006450756.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|567917508|ref|XP_006450760.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|567917510|ref|XP_006450761.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553981|gb|ESR63995.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553982|gb|ESR63996.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553986|gb|ESR64000.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553987|gb|ESR64001.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 286
Score = 69.3 bits (168), Expect = 8e-10
Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = -2
Query: 479 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGE-AETLNDT 303
MGFRLNLKW RGR+ S+ RLS S + + A D
Sbjct: 3 MGFRLNLKWVSPVQSHFFTTSSCRLSSTSV-RGREGSFNSARLSFLSTISEDSASYFQDP 61
Query: 302 SRAHVCSS-SPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 126
+A+ CS + Q +EN Y T E + K
Sbjct: 62 VKAYTCSFVNTQTVENDYSETEEIRQ-------------------------KSTSCIGQD 96
Query: 125 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
A+ S F+LLM+NLD+LE F+DS+A+RLER+IL+QL +LG
Sbjct: 97 ASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLG 137
>ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus]
gi|449507267|ref|XP_004162982.1| PREDICTED: RNA
polymerase sigma factor sigC-like [Cucumis sativus]
Length = 559
Score = 69.3 bits (168), Expect = 8e-10
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Frame = -2
Query: 473 FRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETL-NDTSR 297
FR NL+WG + +GR++++ RLS S + E E++ +T +
Sbjct: 5 FRPNLRWG-FQIQTHSLKNSPSKLSPHASKGREAAFNSGRLSFFSSICEEGESIPRETLK 63
Query: 296 AHVC-SSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQAT 120
+ C S +PQ N L E +M G S ++ + + + S +D + TSL
Sbjct: 64 TYTCLSEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKST-RPSKVEDNFSSCTSLPTG 122
Query: 119 QASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLG 3
+AS F +LM+NLD+LE+ F++S + LERDI+ QL +LG
Sbjct: 123 KASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLG 161
>ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC isoform X3 [Glycine
max]
Length = 459
Score = 68.9 bits (167), Expect = 1e-09
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = -2
Query: 380 RDSSYFLVRLSAASILYGEAETLN-DTSRAHVCSSSP-QLLENYYLGTRESKMALGKGSS 207
R++ + RLS S Y E E L D R SSS + LEN LG E+++ GK S
Sbjct: 40 RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99
Query: 206 DGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDI 27
++ ++DN ++ ++ +A F+LLM+NL +LE+ F DS A+RLE+ I
Sbjct: 100 SSVHKMIDNTQMPFGEVSTVS--KKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAI 157
Query: 26 LEQLERLG 3
+ QL +LG
Sbjct: 158 ILQLGKLG 165
>ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Glycine
max]
Length = 476
Score = 68.9 bits (167), Expect = 1e-09
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = -2
Query: 380 RDSSYFLVRLSAASILYGEAETLN-DTSRAHVCSSSP-QLLENYYLGTRESKMALGKGSS 207
R++ + RLS S Y E E L D R SSS + LEN LG E+++ GK S
Sbjct: 40 RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99
Query: 206 DGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDI 27
++ ++DN ++ ++ +A F+LLM+NL +LE+ F DS A+RLE+ I
Sbjct: 100 SSVHKMIDNTQMPFGEVSTVS--KKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAI 157
Query: 26 LEQLERLG 3
+ QL +LG
Sbjct: 158 ILQLGKLG 165
>ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Glycine
max]
Length = 551
Score = 68.9 bits (167), Expect = 1e-09
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = -2
Query: 380 RDSSYFLVRLSAASILYGEAETLN-DTSRAHVCSSSP-QLLENYYLGTRESKMALGKGSS 207
R++ + RLS S Y E E L D R SSS + LEN LG E+++ GK S
Sbjct: 40 RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99
Query: 206 DGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDI 27
++ ++DN ++ ++ +A F+LLM+NL +LE+ F DS A+RLE+ I
Sbjct: 100 SSVHKMIDNTQMPFGEVSTVS--KKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAI 157
Query: 26 LEQLERLG 3
+ QL +LG
Sbjct: 158 ILQLGKLG 165