BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00015343
         (860 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mi...   343   5e-92
ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mi...   334   3e-89
gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]        323   4e-86
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   322   1e-85
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu...   322   1e-85
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   319   7e-85
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   319   9e-85
ref|NP_564112.1| pseudouridine synthase-like protein [Arabidopsi...   317   3e-84
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   317   4e-84
emb|CBI18897.3| unnamed protein product [Vitis vinifera]              317   5e-84
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   316   6e-84
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]   316   6e-84
gb|EMJ26960.1| hypothetical protein PRUPE_ppa004469mg [Prunus pe...   315   1e-83
ref|XP_002893104.1| tRNA pseudouridine synthase family protein [...   314   3e-83
gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]        313   5e-83
gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tR...   313   5e-83
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   312   9e-83
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   312   9e-83
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   312   1e-82
ref|XP_006307113.1| hypothetical protein CARUB_v10008701mg [Caps...   312   1e-82

>ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Solanum tuberosum]
          Length = 569

 Score =  343 bits (880), Expect = 5e-92
 Identities = 164/209 (78%), Positives = 186/209 (88%), Gaps = 3/209 (1%)
 Frame = +1

Query: 1   SENGAENRLECGNANDDAKLEKKSE---FCYGEEEKERFNRVLKYYEGTHNFHNFTTRTK 171
           SE   E   E   +N++AK+E++ E   FCYGE+EKERFNR+LKYYEGTHNFHNFTTRTK
Sbjct: 253 SEKVEERNGEVEGSNENAKMEEQVEESVFCYGEKEKERFNRILKYYEGTHNFHNFTTRTK 312

Query: 172 AEDPAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESL 351
           A+DPAAKRYI+SFNANTV+++DGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRN APESL
Sbjct: 313 ADDPAAKRYIISFNANTVVNVDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESL 372

Query: 352 IETAFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIY 531
           I TAF + VNINVPMAPEVGLYLDECFF+SYNSKWKDTHEE+S+K Y EEAE+FK KYIY
Sbjct: 373 IVTAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYLEEAEEFKMKYIY 432

Query: 532 SHIASAEHKDGAVALWLHSLNYRNYPDLR 618
           SHIAS E K+G +A+WLHSLN+RNYPDLR
Sbjct: 433 SHIASTEQKEGTMAVWLHSLNHRNYPDLR 461


>ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Solanum lycopersicum]
          Length = 598

 Score =  334 bits (856), Expect = 3e-89
 Identities = 159/205 (77%), Positives = 184/205 (89%), Gaps = 4/205 (1%)
 Frame = +1

Query: 16  ENRLECGNANDD-AKLEKKSE---FCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDP 183
           E R++    +D+ AK E++ E   FCYGE+EKERFNR+LKY+EGTHNFHNFTTRTKA+DP
Sbjct: 256 EERIDVVERSDENAKKEEQVEESVFCYGEKEKERFNRILKYFEGTHNFHNFTTRTKADDP 315

Query: 184 AAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETA 363
           AAKR+I+SFNANTV+++DGIDFVKCEV+GQSFMLHQIRKMIGLAVAIMRN APESLI TA
Sbjct: 316 AAKRFIISFNANTVVNVDGIDFVKCEVIGQSFMLHQIRKMIGLAVAIMRNCAPESLIVTA 375

Query: 364 FEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIA 543
           F + VNINVPMAPEVGLYLDECFF+SYNSKWKDTHEE+S+K Y EEAE+FK KYIYSHIA
Sbjct: 376 FRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLKAYLEEAEEFKVKYIYSHIA 435

Query: 544 SAEHKDGAVALWLHSLNYRNYPDLR 618
           S E K+G +A+WLHSLN+RNYPDLR
Sbjct: 436 STEQKEGTMAVWLHSLNHRNYPDLR 460


>gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 621

 Score =  323 bits (829), Expect = 4e-86
 Identities = 150/197 (76%), Positives = 174/197 (88%)
 Frame = +1

Query: 28  ECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYILS 207
           E GN N + K EK+S+F YGE+E+ERFNR+LK+YEGTHNFHNFTTRTKAEDPAA+R+I+S
Sbjct: 405 EEGNVNGEQKPEKRSDFSYGEKERERFNRILKHYEGTHNFHNFTTRTKAEDPAAQRFIIS 464

Query: 208 FNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNIN 387
           FNANTVI ++G++FVKCEVVGQSFMLHQIRKMIGLAVAIMRN  PESL+E A ++ VNIN
Sbjct: 465 FNANTVIPVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCVPESLMENALQKDVNIN 524

Query: 388 VPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDGA 567
           +P APEVGLYLDEC FSSYN KWKD+HEE+SMK YAEEAE+FK K+IYSHI   E K+G 
Sbjct: 525 IPTAPEVGLYLDECLFSSYNKKWKDSHEEMSMKAYAEEAEEFKMKHIYSHIGLTEQKEGV 584

Query: 568 VALWLHSLNYRNYPDLR 618
           VALWLHSLNYRNYPD +
Sbjct: 585 VALWLHSLNYRNYPDFQ 601


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
           gi|557537401|gb|ESR48519.1| hypothetical protein
           CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  322 bits (824), Expect = 1e-85
 Identities = 151/207 (72%), Positives = 180/207 (86%)
 Frame = +1

Query: 1   SENGAENRLECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAED 180
           S+N ++   E  + N + KL K S FCYGEEEK+RFNR+LK+Y G+HNFHNFTTRTKAED
Sbjct: 311 SKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFHNFTTRTKAED 370

Query: 181 PAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIET 360
           P+A+RYI+SF A++V++++GIDF+KCEVVGQSFMLHQIRKMIGLAVA++RN APESLIET
Sbjct: 371 PSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAPESLIET 430

Query: 361 AFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHI 540
           A ++ VNINVP APEVGLYLDEC F+SYN KWKD+HEELSMK Y EEAE+FK K+I+SHI
Sbjct: 431 ALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMKHIFSHI 490

Query: 541 ASAEHKDGAVALWLHSLNYRNYPDLRF 621
           A  E K+G VALWLHSLNYRNYPDLRF
Sbjct: 491 ARTEQKEGVVALWLHSLNYRNYPDLRF 517


>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
           gi|550344062|gb|EEE79946.2| hypothetical protein
           POPTR_0002s01580g [Populus trichocarpa]
          Length = 516

 Score =  322 bits (824), Expect = 1e-85
 Identities = 150/197 (76%), Positives = 174/197 (88%), Gaps = 6/197 (3%)
 Frame = +1

Query: 46  DDAKLEKKSE------FCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYILS 207
           DD K + K E      FCYGE+EKERFNR+L YY G+HNFHNFTTRTKAEDP+A+RYI+S
Sbjct: 289 DDEKTKSKEEMVKGSSFCYGEKEKERFNRILGYYVGSHNFHNFTTRTKAEDPSARRYIVS 348

Query: 208 FNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNIN 387
           F A T ++++GI+FVKCEVVGQSFMLHQIRKMIG+AVAIMRN APESLI+TA ++ VNIN
Sbjct: 349 FEAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIQTALQKDVNIN 408

Query: 388 VPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDGA 567
           VP APEVGLYLDECFF+SYN KWKD+HEE+SMKDY EEAEDFK K+IYSHIA+ EHK+G+
Sbjct: 409 VPTAPEVGLYLDECFFTSYNQKWKDSHEEISMKDYEEEAEDFKMKHIYSHIATTEHKEGS 468

Query: 568 VALWLHSLNYRNYPDLR 618
           VALWLHSLN+RNYPDLR
Sbjct: 469 VALWLHSLNHRNYPDLR 485


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
           gi|550339814|gb|EEE94755.2| hypothetical protein
           POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  319 bits (818), Expect = 7e-85
 Identities = 150/205 (73%), Positives = 177/205 (86%)
 Frame = +1

Query: 4   ENGAENRLECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDP 183
           ENG +      N   + +  K S FCYGE+EKERFNR+L YY G+HNFHNFTTRTKAEDP
Sbjct: 273 ENGDDK-----NTKSEEEAIKGSGFCYGEKEKERFNRILNYYLGSHNFHNFTTRTKAEDP 327

Query: 184 AAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETA 363
           +A+RYI+SF+A T ++++GI+FVKCEVVGQSFMLHQIRKMIG+AVAIMRN A ESLI+TA
Sbjct: 328 SAQRYIISFDAKTTVAVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESLIQTA 387

Query: 364 FEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIA 543
            ++ VNINVP APEVGLYLDECFF+SYN KWKD+HEELSMKDY EEAE+FK K+IYSHIA
Sbjct: 388 LQKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMKHIYSHIA 447

Query: 544 SAEHKDGAVALWLHSLNYRNYPDLR 618
           + EHK+G+VALWLHSLN+RNYPDLR
Sbjct: 448 TTEHKEGSVALWLHSLNHRNYPDLR 472


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 584

 Score =  319 bits (817), Expect = 9e-85
 Identities = 150/193 (77%), Positives = 169/193 (87%)
 Frame = +1

Query: 43  NDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANT 222
           N +  + K SEFCYGEEEKE+FNR+LKYY G+HNFHNFTTRTKAEDP+A+RYI+SF+A T
Sbjct: 337 NGEEHVMKGSEFCYGEEEKEKFNRILKYYVGSHNFHNFTTRTKAEDPSAQRYIISFDART 396

Query: 223 VISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNINVPMAP 402
            ++++GI+FVKCEV+GQSFMLHQIRKMIGLAVAIMRN APESLI TA ++ V INVP AP
Sbjct: 397 TVTVEGIEFVKCEVIGQSFMLHQIRKMIGLAVAIMRNCAPESLISTALQKDVKINVPTAP 456

Query: 403 EVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDGAVALWL 582
           EVGLYLDECFF+SYN KWKD HEEL MKDY E AEDFK KYIYSHIAS E K+G V LWL
Sbjct: 457 EVGLYLDECFFTSYNQKWKD-HEELCMKDYEEVAEDFKMKYIYSHIASTEQKEGVVGLWL 515

Query: 583 HSLNYRNYPDLRF 621
           HSLNYRNYPDLRF
Sbjct: 516 HSLNYRNYPDLRF 528


>ref|NP_564112.1| pseudouridine synthase-like protein [Arabidopsis thaliana]
           gi|9558589|gb|AAF88152.1|AC026234_3 Contains similarity
           to a pseudouridine synthase 1 from Homo sapiens
           gi|4455035 and contains tRNA pseudoridine synthase
           PF|01416 domain. ESTs gb|T76494, gb|W43440 come from
           this gene [Arabidopsis thaliana]
           gi|14334544|gb|AAK59680.1| unknown protein [Arabidopsis
           thaliana] gi|16323470|gb|AAL15229.1| unknown protein
           [Arabidopsis thaliana] gi|332191845|gb|AEE29966.1|
           pseudouridine synthase-like protein [Arabidopsis
           thaliana]
          Length = 549

 Score =  317 bits (813), Expect = 3e-84
 Identities = 150/205 (73%), Positives = 175/205 (85%)
 Frame = +1

Query: 4   ENGAENRLECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDP 183
           E+    ++E  N   +   + +S+FCYGE+EKERFNR+L YY G+HNFHNFTTRTKA DP
Sbjct: 287 ESNTLAKVEMNNGEGEDMTKSESKFCYGEKEKERFNRILSYYVGSHNFHNFTTRTKAADP 346

Query: 184 AAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETA 363
           AA RYILSFNANTVI++DG DFVKCEVVGQSFMLHQIRKMIGLAVAIMRN APESLIE +
Sbjct: 347 AANRYILSFNANTVINLDGKDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNYAPESLIEAS 406

Query: 364 FEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIA 543
           F++ V INVPMAPEVGLYLDECFF+SYN ++K +HEE+SM++Y E AE+FK KY+YSHI 
Sbjct: 407 FKKDVRINVPMAPEVGLYLDECFFTSYNKRFKGSHEEVSMEEYKEVAEEFKWKYVYSHIG 466

Query: 544 SAEHKDGAVALWLHSLNYRNYPDLR 618
           SAE KDGAVA+WLHSLN RNYPDLR
Sbjct: 467 SAEEKDGAVAIWLHSLNQRNYPDLR 491


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Citrus sinensis]
          Length = 526

 Score =  317 bits (812), Expect = 4e-84
 Identities = 148/207 (71%), Positives = 178/207 (85%)
 Frame = +1

Query: 1   SENGAENRLECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAED 180
           S+N ++   E  + N + KL K S FCYGEEEK+RFNR+LK+Y G+HNFHNFTTRTKAED
Sbjct: 311 SKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFHNFTTRTKAED 370

Query: 181 PAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIET 360
           P+A+RYI+SF A++V++++GIDF+KCEVVGQSFMLHQIRKMIGLAVA++RN AP+SLIET
Sbjct: 371 PSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAPQSLIET 430

Query: 361 AFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHI 540
           A ++ VNINVP APEVGLYLDEC F+SYN KWKD+HEELSMK Y EEAE+FK K+I+SHI
Sbjct: 431 ALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMKHIFSHI 490

Query: 541 ASAEHKDGAVALWLHSLNYRNYPDLRF 621
              E K+G VALWLHSLNYRNYPDL F
Sbjct: 491 TRTEQKEGVVALWLHSLNYRNYPDLHF 517


>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  317 bits (811), Expect = 5e-84
 Identities = 144/193 (74%), Positives = 175/193 (90%)
 Frame = +1

Query: 37  NANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNA 216
           ++  + KLEK S FCYG++E+ERFNR+L +Y GTHNFHNFTTR KAEDP+A+R+I+SF+ 
Sbjct: 206 SSEGENKLEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDG 265

Query: 217 NTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNINVPM 396
           NT+++++GI+FVKCEVVGQSFMLHQIRKMIGLAVAIMRN+APESL+ETA  + VNINVP 
Sbjct: 266 NTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPT 325

Query: 397 APEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDGAVAL 576
           APEVGLYLDECFFSSYN KW+D+HEE+SMK YAEEAE+FK K++YSHIA+ EHK+G VAL
Sbjct: 326 APEVGLYLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVAL 385

Query: 577 WLHSLNYRNYPDL 615
           WLHSLN+RNYPDL
Sbjct: 386 WLHSLNHRNYPDL 398


>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
           vinifera]
          Length = 503

 Score =  316 bits (810), Expect = 6e-84
 Identities = 144/187 (77%), Positives = 172/187 (91%)
 Frame = +1

Query: 55  KLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISI 234
           KLEK S FCYG++E+ERFNR+L +Y GTHNFHNFTTR KAEDP+A+R+I+SF+ NT++++
Sbjct: 296 KLEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTV 355

Query: 235 DGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNINVPMAPEVGL 414
           +GI+FVKCEVVGQSFMLHQIRKMIGLAVAIMRN+APESL+ETA  + VNINVP APEVGL
Sbjct: 356 EGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGL 415

Query: 415 YLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDGAVALWLHSLN 594
           YLDECFFSSYN KW+D+HEE+SMK YAEEAE+FK K++YSHIA+ EHK+G VALWLHSLN
Sbjct: 416 YLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLN 475

Query: 595 YRNYPDL 615
           +RNYPDL
Sbjct: 476 HRNYPDL 482


>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
          Length = 559

 Score =  316 bits (810), Expect = 6e-84
 Identities = 144/187 (77%), Positives = 172/187 (91%)
 Frame = +1

Query: 55  KLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISI 234
           KLEK S FCYG++E+ERFNR+L +Y GTHNFHNFTTR KAEDP+A+R+I+SF+ NT++++
Sbjct: 352 KLEKGSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTV 411

Query: 235 DGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNINVPMAPEVGL 414
           +GI+FVKCEVVGQSFMLHQIRKMIGLAVAIMRN+APESL+ETA  + VNINVP APEVGL
Sbjct: 412 EGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGL 471

Query: 415 YLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDGAVALWLHSLN 594
           YLDECFFSSYN KW+D+HEE+SMK YAEEAE+FK K++YSHIA+ EHK+G VALWLHSLN
Sbjct: 472 YLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLN 531

Query: 595 YRNYPDL 615
           +RNYPDL
Sbjct: 532 HRNYPDL 538


>gb|EMJ26960.1| hypothetical protein PRUPE_ppa004469mg [Prunus persica]
          Length = 508

 Score =  315 bits (808), Expect = 1e-83
 Identities = 149/195 (76%), Positives = 169/195 (86%), Gaps = 2/195 (1%)
 Frame = +1

Query: 37  NANDDAKLEKKS--EFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYILSF 210
           NAN + K EK S  E+CYGE+EK+RFNR+L  YEGTHNFHNFTTRTKA DPAA+RYI+SF
Sbjct: 290 NANGEEKPEKGSGSEYCYGEKEKDRFNRILNCYEGTHNFHNFTTRTKAADPAARRYIISF 349

Query: 211 NANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNINV 390
           NANT ++I G+DFVKCEVVGQSFMLHQIRKMIGLAVAI RN APESL+E A ++ VN+NV
Sbjct: 350 NANTTVTIGGMDFVKCEVVGQSFMLHQIRKMIGLAVAIFRNCAPESLLEIALQKDVNVNV 409

Query: 391 PMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDGAV 570
           P APEVGLYLDECFF+SYN KW D+HEELSMKDY +EAEDFK K+IY HIAS E K+G V
Sbjct: 410 PTAPEVGLYLDECFFASYNQKWGDSHEELSMKDYEQEAEDFKMKHIYPHIASTEQKEGVV 469

Query: 571 ALWLHSLNYRNYPDL 615
            LWLHSLN+RNYPDL
Sbjct: 470 GLWLHSLNHRNYPDL 484


>ref|XP_002893104.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338946|gb|EFH69363.1| tRNA
           pseudouridine synthase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 557

 Score =  314 bits (804), Expect = 3e-83
 Identities = 147/184 (79%), Positives = 168/184 (91%)
 Frame = +1

Query: 67  KSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANTVISIDGID 246
           +S+FCYGE+EKERFNR+L YY G+HNFHNFTTRTKA DPAA RYILSFNANTVI++DG D
Sbjct: 306 ESKFCYGEKEKERFNRILSYYVGSHNFHNFTTRTKAADPAANRYILSFNANTVINLDGKD 365

Query: 247 FVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNINVPMAPEVGLYLDE 426
           FVKCEVVGQSFMLHQIRKMIGLAVA+MRN APESLIETAF++ V INVPMAPEVGLYLDE
Sbjct: 366 FVKCEVVGQSFMLHQIRKMIGLAVAVMRNYAPESLIETAFKKDVRINVPMAPEVGLYLDE 425

Query: 427 CFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDGAVALWLHSLNYRNY 606
           CFF+SYN ++K +HEE+SM+++ E AE+FK KY+YSHI SAE KDGAVA+WLHSLN RNY
Sbjct: 426 CFFTSYNKRFKGSHEEVSMEEFKEVAEEFKWKYVYSHIGSAEEKDGAVAIWLHSLNQRNY 485

Query: 607 PDLR 618
           PDLR
Sbjct: 486 PDLR 489


>gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]
          Length = 565

 Score =  313 bits (802), Expect = 5e-83
 Identities = 147/207 (71%), Positives = 176/207 (85%)
 Frame = +1

Query: 1   SENGAENRLECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAED 180
           +EN A+  +E    N + KL  KS F Y +E KERFNR+LKYY GTHNFHNFTTRTKAED
Sbjct: 318 TENKAQG-MESEKINGEEKLPTKSTFSYTDEVKERFNRILKYYIGTHNFHNFTTRTKAED 376

Query: 181 PAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIET 360
           PAAKR+I+SF A+ V+S+DGIDFV+CEVVGQSFMLHQIRKMIGLAVA+MRN APES+ + 
Sbjct: 377 PAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDV 436

Query: 361 AFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHI 540
           AF + VN+NVP APEVGLYLDEC F+SYN KWKD+HE +SM+ Y+EEAE+FK KYI++HI
Sbjct: 437 AFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEAEEFKVKYIFTHI 496

Query: 541 ASAEHKDGAVALWLHSLNYRNYPDLRF 621
           A+ EHK+GAVALWLHSLN+RNYPD R+
Sbjct: 497 AAMEHKEGAVALWLHSLNHRNYPDFRY 523


>gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tRNA pseudouridine
           synthase family protein [Zea mays]
          Length = 562

 Score =  313 bits (802), Expect = 5e-83
 Identities = 147/207 (71%), Positives = 176/207 (85%)
 Frame = +1

Query: 1   SENGAENRLECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAED 180
           +EN A+  +E    N + KL  KS F Y +E KERFNR+LKYY GTHNFHNFTTRTKAED
Sbjct: 315 TENKAQG-MESEKINGEEKLPTKSTFSYTDEVKERFNRILKYYIGTHNFHNFTTRTKAED 373

Query: 181 PAAKRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIET 360
           PAAKR+I+SF A+ V+S+DGIDFV+CEVVGQSFMLHQIRKMIGLAVA+MRN APES+ + 
Sbjct: 374 PAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDV 433

Query: 361 AFEQKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHI 540
           AF + VN+NVP APEVGLYLDEC F+SYN KWKD+HE +SM+ Y+EEAE+FK KYI++HI
Sbjct: 434 AFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEAEEFKVKYIFTHI 493

Query: 541 ASAEHKDGAVALWLHSLNYRNYPDLRF 621
           A+ EHK+GAVALWLHSLN+RNYPD R+
Sbjct: 494 AAMEHKEGAVALWLHSLNHRNYPDFRY 520


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  312 bits (800), Expect = 9e-83
 Identities = 147/203 (72%), Positives = 172/203 (84%)
 Frame = +1

Query: 10  GAENRLECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAA 189
           G+++ +     + + K +    F YGEEEK RFNR+LK+Y GTHNFHNFTTRTKAEDPAA
Sbjct: 295 GSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAA 354

Query: 190 KRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFE 369
           +R+I+SF+A+ ++ ++GI+FVKCEVVGQSFMLHQIRKM+GLAVAIMRN APESLIE A +
Sbjct: 355 RRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQ 414

Query: 370 QKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASA 549
           + VNINVP APEVGLYLDEC F+SYN KWKDTHEE+SMK Y E AEDFK K IYSHIAS 
Sbjct: 415 KDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIAST 474

Query: 550 EHKDGAVALWLHSLNYRNYPDLR 618
           EHKDGAVALWLHSLN+RNYPDLR
Sbjct: 475 EHKDGAVALWLHSLNHRNYPDLR 497


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Cucumis sativus]
          Length = 519

 Score =  312 bits (800), Expect = 9e-83
 Identities = 147/203 (72%), Positives = 172/203 (84%)
 Frame = +1

Query: 10  GAENRLECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAA 189
           G+++ +     + + K +    F YGEEEK RFNR+LK+Y GTHNFHNFTTRTKAEDPAA
Sbjct: 295 GSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAA 354

Query: 190 KRYILSFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFE 369
           +R+I+SF+A+ ++ ++GI+FVKCEVVGQSFMLHQIRKM+GLAVAIMRN APESLIE A +
Sbjct: 355 RRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQ 414

Query: 370 QKVNINVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASA 549
           + VNINVP APEVGLYLDEC F+SYN KWKDTHEE+SMK Y E AEDFK K IYSHIAS 
Sbjct: 415 KDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIAST 474

Query: 550 EHKDGAVALWLHSLNYRNYPDLR 618
           EHKDGAVALWLHSLN+RNYPDLR
Sbjct: 475 EHKDGAVALWLHSLNHRNYPDLR 497


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           isoform X2 [Glycine max]
          Length = 518

 Score =  312 bits (799), Expect = 1e-82
 Identities = 149/198 (75%), Positives = 170/198 (85%)
 Frame = +1

Query: 25  LECGNANDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYIL 204
           LE    N + K    S FCYGE+E+ERFN++LK + GTHNFHNFTTRTKAEDPAA+RYI+
Sbjct: 266 LEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYII 325

Query: 205 SFNANTVISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNI 384
           SFNANT + ++G++FVKCEVVGQSFMLHQIRKMIGLAVAIMRN APESLI+ A +Q VNI
Sbjct: 326 SFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNI 385

Query: 385 NVPMAPEVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDG 564
           NVP APEVGLYLDECFF+SYN KWKD HEELSMK Y +EA++FK KYIYSHIAS E K+G
Sbjct: 386 NVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEG 444

Query: 565 AVALWLHSLNYRNYPDLR 618
            VALWLHSLN+RNYPDLR
Sbjct: 445 TVALWLHSLNHRNYPDLR 462


>ref|XP_006307113.1| hypothetical protein CARUB_v10008701mg [Capsella rubella]
           gi|482575824|gb|EOA40011.1| hypothetical protein
           CARUB_v10008701mg [Capsella rubella]
          Length = 574

 Score =  312 bits (799), Expect = 1e-82
 Identities = 146/192 (76%), Positives = 170/192 (88%)
 Frame = +1

Query: 43  NDDAKLEKKSEFCYGEEEKERFNRVLKYYEGTHNFHNFTTRTKAEDPAAKRYILSFNANT 222
           N + +   +  FCYGE+EKERFNR+L YY G+HNFHNFTTRTKA DPAA RYILSFNANT
Sbjct: 315 NKERRDMTEGNFCYGEKEKERFNRILSYYVGSHNFHNFTTRTKAADPAANRYILSFNANT 374

Query: 223 VISIDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFEQKVNINVPMAP 402
           VI++DG DFVKCEVVGQSFMLHQIRKMIGLAVA+MRN APE+LIETAF++ V INVPMAP
Sbjct: 375 VINLDGKDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNYAPETLIETAFKKDVRINVPMAP 434

Query: 403 EVGLYLDECFFSSYNSKWKDTHEELSMKDYAEEAEDFKTKYIYSHIASAEHKDGAVALWL 582
           EVGLYLDECFF+SYN ++K +HEE+SM++Y E AE+FK K++YSHI SAE KDGAVA+WL
Sbjct: 435 EVGLYLDECFFTSYNKRFKGSHEEVSMEEYKEVAEEFKWKHVYSHIGSAEEKDGAVAIWL 494

Query: 583 HSLNYRNYPDLR 618
           HSLN+RNYPDLR
Sbjct: 495 HSLNHRNYPDLR 506