BLASTX nr result
ID: Rehmannia26_contig00014416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00014416
(500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [... 166 3e-39
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-... 161 1e-37
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-... 152 4e-35
ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-... 151 1e-34
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-... 147 1e-33
gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis] 147 2e-33
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida] 146 3e-33
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe... 142 5e-32
ref|XP_006421901.1| hypothetical protein CICLE_v10004302mg [Citr... 142 6e-32
emb|CBI31781.3| unnamed protein product [Vitis vinifera] 140 1e-31
ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-... 139 5e-31
gb|EOY23170.1| DNA mismatch repair protein MSH3 isoform 2, parti... 139 5e-31
gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theob... 139 5e-31
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-... 132 5e-29
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-... 132 5e-29
ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutr... 132 6e-29
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-... 131 8e-29
ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Popu... 131 1e-28
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t... 131 1e-28
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab... 126 3e-27
>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
MSH3, putative [Ricinus communis]
Length = 1100
Score = 166 bits (420), Expect = 3e-39
Identities = 90/150 (60%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
+QPD ++LLS+VL LGR+ D+QRGITRIFHRTATASEFIAVIQA+++AG+QL++L +E
Sbjct: 509 IQPDFYHLLSTVLEMLGRSPDIQRGITRIFHRTATASEFIAVIQAILIAGKQLRRLQIEE 568
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
NK +Q +TVRS+LL+KLILT SS V AA+LLS LNKEAAE DL NL +IS+G
Sbjct: 569 EQNNKRVQAKTVRSVLLKKLILTVSSSSVVGHAAKLLSTLNKEAAEHGDLTNLIVISNGQ 628
Query: 411 FPEVQLTNHLLH--PFRL*SLQNLIVKLLE 494
FPEV +N +H +L SL NL K L+
Sbjct: 629 FPEVASSNKAVHLAKEKLDSLINLYRKQLK 658
>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 161 bits (407), Expect = 1e-37
Identities = 84/131 (64%), Positives = 105/131 (80%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
VQP+++ LLSSVL TLGR+ D+QRG+TRIFHRTATASEFI+V QA++ AG+QLQ+LH+E
Sbjct: 518 VQPEVNYLLSSVLTTLGRSPDIQRGLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEE 577
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
D ++ Q R+VRS+LLRKLILTASS + AA+LLS LNKEAA++ DL NLFIIS G
Sbjct: 578 KDVDEKGQSRSVRSVLLRKLILTASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQ 637
Query: 411 FPEVQLTNHLL 443
FPEV L+
Sbjct: 638 FPEVAKARSLV 648
>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
lycopersicum]
Length = 1117
Score = 152 bits (384), Expect = 4e-35
Identities = 78/123 (63%), Positives = 100/123 (81%)
Frame = +3
Query: 54 QPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEVA 233
QP+IH+++ SVL T+GR D+QRG+TRIFHR ATA+EFIAVIQA+++A +QLQ+L +
Sbjct: 521 QPEIHHIIVSVLSTIGRPPDIQRGLTRIFHRKATAAEFIAVIQAILIAAKQLQRLFI-TE 579
Query: 234 DENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGSF 413
D + NLQ T+ S+LLRKLI ASS V + AA+LLS LNKEAA+++DLHNLFIISDG F
Sbjct: 580 DRSTNLQRETLHSVLLRKLISIASSSTVINGAAKLLSALNKEAADRQDLHNLFIISDGKF 639
Query: 414 PEV 422
PEV
Sbjct: 640 PEV 642
>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
tuberosum]
Length = 1117
Score = 151 bits (381), Expect = 1e-34
Identities = 77/123 (62%), Positives = 102/123 (82%)
Frame = +3
Query: 54 QPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEVA 233
QP+IH+++ SVL T+GR+ D+QRG+TRIFHR ATA+EFIAVIQA+++A +QLQ+L + +
Sbjct: 521 QPEIHHIIVSVLSTIGRSPDIQRGLTRIFHRKATAAEFIAVIQAILIAAKQLQQLCI-IE 579
Query: 234 DENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGSF 413
D++ NL T+ S+LLRKLI ASS V + AA+LLS LNKEAA+++DLHNLFIISDG F
Sbjct: 580 DKSTNLPRETLHSVLLRKLISIASSSTVINGAAKLLSALNKEAADRQDLHNLFIISDGKF 639
Query: 414 PEV 422
PEV
Sbjct: 640 PEV 642
>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
subsp. vesca]
Length = 1106
Score = 147 bits (371), Expect = 1e-33
Identities = 78/124 (62%), Positives = 96/124 (77%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
++P+ + +LSSVL TLGR+ D+QRGITRIFHRTAT SEFIAVIQA++ AG+QLQ+L ++
Sbjct: 511 LRPEFNYILSSVLTTLGRSPDIQRGITRIFHRTATPSEFIAVIQAILHAGKQLQQLQIDE 570
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
K L + V S LLRKLILTASS + AA+LLS LNKEAA+Q+DL NL ISDG
Sbjct: 571 EGSGKTLGGKAVCSELLRKLILTASSSSIIGNAAKLLSTLNKEAADQQDLQNLITISDGQ 630
Query: 411 FPEV 422
FPEV
Sbjct: 631 FPEV 634
>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
Length = 1080
Score = 147 bits (370), Expect = 2e-33
Identities = 81/128 (63%), Positives = 99/128 (77%), Gaps = 4/128 (3%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
++P+I ++LSSVL TLGR D+QRGITRIFHRT T +EFIAVIQA++ AG+QLQ+LH E
Sbjct: 496 IRPEISHVLSSVLTTLGRVPDIQRGITRIFHRTTTPTEFIAVIQAILYAGKQLQQLHNEE 555
Query: 231 ADENK----NLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFII 398
+E + + + VRS LLRKLILTASSP V AA+LLS LN EAA+QRDL NL II
Sbjct: 556 EEEEEEGDGKFRAKIVRSELLRKLILTASSPTVIRNAAKLLSSLNNEAADQRDLQNL-II 614
Query: 399 SDGSFPEV 422
S+G FPEV
Sbjct: 615 SNGQFPEV 622
>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 846
Score = 146 bits (368), Expect = 3e-33
Identities = 78/123 (63%), Positives = 100/123 (81%)
Frame = +3
Query: 54 QPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEVA 233
QP+IH+L+SS L +LGR+ D+QRGITRIFHR ATASE VIQA+++A +QL +L +E
Sbjct: 251 QPEIHHLISSALSSLGRSPDIQRGITRIFHRNATASE---VIQAILIAAKQLHQLSLE-E 306
Query: 234 DENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGSF 413
D++ NLQ +T+RS+LLRKLI ASS V + AA+LLS LNKEAA+ RDLHNLF+ISDG F
Sbjct: 307 DKSVNLQRQTLRSVLLRKLISIASSSTVINAAAKLLSALNKEAADSRDLHNLFMISDGKF 366
Query: 414 PEV 422
P+V
Sbjct: 367 PQV 369
>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
Length = 1096
Score = 142 bits (358), Expect = 5e-32
Identities = 81/123 (65%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = +3
Query: 63 IHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGR---QLQKLHVEVA 233
++ +LSSVL TLGR+ D+QRGITRIFHRTAT SEFIAVIQA++ AG+ QLQ+L +E
Sbjct: 504 LNYILSSVLTTLGRSTDIQRGITRIFHRTATPSEFIAVIQAILYAGKQLQQLQQLQIEEE 563
Query: 234 DENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGSF 413
+NL+ +TVRS LLRKLI TASS V AARLLS LNKEAA+++DL NL IISDG F
Sbjct: 564 GSKENLRGKTVRSDLLRKLICTASSSTVIGNAARLLSTLNKEAADKQDLPNL-IISDGQF 622
Query: 414 PEV 422
PEV
Sbjct: 623 PEV 625
>ref|XP_006421901.1| hypothetical protein CICLE_v10004302mg [Citrus clementina]
gi|557523774|gb|ESR35141.1| hypothetical protein
CICLE_v10004302mg [Citrus clementina]
Length = 853
Score = 142 bits (357), Expect = 6e-32
Identities = 74/124 (59%), Positives = 98/124 (79%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
V+P + +LSSVL +LGR+ D+QRGITRIFHRTAT SEFIAV+QA++ AG+QLQ+LH++
Sbjct: 498 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID- 556
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
+ + + +T+ S LL++LILTASSP V AA+LLS +NKEAA+Q DL NL IIS+G
Sbjct: 557 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 616
Query: 411 FPEV 422
F EV
Sbjct: 617 FSEV 620
>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
Length = 903
Score = 140 bits (354), Expect = 1e-31
Identities = 73/115 (63%), Positives = 91/115 (79%)
Frame = +3
Query: 99 GRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEVADENKNLQVRTVRSIL 278
GR+ D+QRG+TRIFHRTATASEFI+V QA++ AG+QLQ+LH+E D ++ Q R+VRS+L
Sbjct: 394 GRSPDIQRGLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRSVL 453
Query: 279 LRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGSFPEVQLTNHLL 443
LRKLILTASS + AA+LLS LNKEAA++ DL NLFIIS G FPEV L+
Sbjct: 454 LRKLILTASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPEVAKARSLV 508
>ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-like [Citrus sinensis]
Length = 1087
Score = 139 bits (349), Expect = 5e-31
Identities = 73/124 (58%), Positives = 97/124 (78%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
V+P + +LSSVL +LGR+ D+QRGITRIFHRTAT SEFIAV+QA++ AG+QLQ+L ++
Sbjct: 498 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLQID- 556
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
+ + + +T+ S LL++LILTASSP V AA+LLS +NKEAA+Q DL NL IIS+G
Sbjct: 557 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 616
Query: 411 FPEV 422
F EV
Sbjct: 617 FSEV 620
>gb|EOY23170.1| DNA mismatch repair protein MSH3 isoform 2, partial [Theobroma
cacao]
Length = 861
Score = 139 bits (349), Expect = 5e-31
Identities = 75/126 (59%), Positives = 99/126 (78%), Gaps = 3/126 (2%)
Frame = +3
Query: 54 QPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEVA 233
QP+ +++LSSVL LGR+ D+QRGITRIFHRTAT +EFIAVI+A++ AG+QLQ+LH++
Sbjct: 523 QPEFYSVLSSVLTFLGRSPDIQRGITRIFHRTATPAEFIAVIKAILSAGKQLQRLHIDEE 582
Query: 234 DE---NKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISD 404
E +K ++V V+S LL++LILTASS V AA+LLS LNKEAA++ DL NL IIS+
Sbjct: 583 HEDNCSKKVRVGIVQSALLKRLILTASSSNVLGNAAKLLSFLNKEAADKGDLTNLIIISN 642
Query: 405 GSFPEV 422
FPEV
Sbjct: 643 NQFPEV 648
>gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
Length = 1115
Score = 139 bits (349), Expect = 5e-31
Identities = 75/126 (59%), Positives = 99/126 (78%), Gaps = 3/126 (2%)
Frame = +3
Query: 54 QPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEVA 233
QP+ +++LSSVL LGR+ D+QRGITRIFHRTAT +EFIAVI+A++ AG+QLQ+LH++
Sbjct: 523 QPEFYSVLSSVLTFLGRSPDIQRGITRIFHRTATPAEFIAVIKAILSAGKQLQRLHIDEE 582
Query: 234 DE---NKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISD 404
E +K ++V V+S LL++LILTASS V AA+LLS LNKEAA++ DL NL IIS+
Sbjct: 583 HEDNCSKKVRVGIVQSALLKRLILTASSSNVLGNAAKLLSFLNKEAADKGDLTNLIIISN 642
Query: 405 GSFPEV 422
FPEV
Sbjct: 643 NQFPEV 648
>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 966
Score = 132 bits (332), Expect = 5e-29
Identities = 70/124 (56%), Positives = 95/124 (76%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
++P+++ +LSSVL TLGRA D+QRGITRIFHRTA SEFIAVIQA++ AG+QLQ+ H++
Sbjct: 536 IEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDE 595
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
D+N + + + S LLRKLIL+ASS + + AA+LLS ++KEAA+Q D NL II
Sbjct: 596 EDDNCSSE-SIIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQGDFPNLMIIYSDQ 654
Query: 411 FPEV 422
FP+V
Sbjct: 655 FPKV 658
>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 1094
Score = 132 bits (332), Expect = 5e-29
Identities = 70/124 (56%), Positives = 95/124 (76%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
++P+++ +LSSVL TLGRA D+QRGITRIFHRTA SEFIAVIQA++ AG+QLQ+ H++
Sbjct: 519 IEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDE 578
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
D+N + + + S LLRKLIL+ASS + + AA+LLS ++KEAA+Q D NL II
Sbjct: 579 EDDNCSSE-SIIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQGDFPNLMIIYSDQ 637
Query: 411 FPEV 422
FP+V
Sbjct: 638 FPKV 641
>ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutrema salsugineum]
gi|557114467|gb|ESQ54750.1| hypothetical protein
EUTSA_v10024274mg [Eutrema salsugineum]
Length = 1088
Score = 132 bits (331), Expect = 6e-29
Identities = 70/124 (56%), Positives = 91/124 (73%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
V P+ + +LSSVL L R+ D+ RGITRIFHRTA A+EFIAVI+A+++AG+QLQ+L ++
Sbjct: 503 VPPEFYLVLSSVLTALSRSPDIHRGITRIFHRTAKAAEFIAVIEAILLAGKQLQRLGIKQ 562
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
E K++Q TVRS LLRKLI SSP V D AA+LLS LNKE + DL ++ I S G
Sbjct: 563 DCELKSMQSATVRSSLLRKLISVVSSPAVVDNAAKLLSGLNKEGVVRGDLLDILITSSGQ 622
Query: 411 FPEV 422
FPE+
Sbjct: 623 FPEL 626
>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
arietinum]
Length = 1076
Score = 131 bits (330), Expect = 8e-29
Identities = 70/124 (56%), Positives = 92/124 (74%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
VQP + +LSSVL LGRA D+QRGITRIFH TAT SEF+A+IQA++ AG++LQ+L++
Sbjct: 503 VQPGLAYILSSVLTALGRASDIQRGITRIFHCTATPSEFVAIIQAILSAGKRLQQLNIGE 562
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
D+N L RS LL+KLI TASS V AA++LS LNK++A+Q DL N+ I ++G
Sbjct: 563 GDDNNKL-----RSDLLKKLISTASSASVIGNAAKMLSSLNKDSADQGDLTNMIIATEGQ 617
Query: 411 FPEV 422
FPEV
Sbjct: 618 FPEV 621
>ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Populus trichocarpa]
gi|550322628|gb|EEF06592.2| hypothetical protein
POPTR_0015s13240g [Populus trichocarpa]
Length = 963
Score = 131 bits (329), Expect = 1e-28
Identities = 76/151 (50%), Positives = 96/151 (63%), Gaps = 27/151 (17%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEF--------------------- 167
VQPD++ LLS+VL LGR+ D++RGITRIFHRTATASEF
Sbjct: 364 VQPDLYYLLSAVLTALGRSPDIERGITRIFHRTATASEFLLMFLIMYLTYLSSFSSPIAV 423
Query: 168 ------IAVIQAVVVAGRQLQKLHVEVADENKNLQVRTVRSILLRKLILTASSPCVTDTA 329
IAV QA++ AG+QL++L ++ + +TV+S+LL++LIL ASS V A
Sbjct: 424 LVWLWFIAVFQAILAAGKQLKRLCIQEEHNYDGVGSKTVKSVLLKRLILAASSSSVVGNA 483
Query: 330 ARLLSKLNKEAAEQRDLHNLFIISDGSFPEV 422
A+LLS LNKEAAEQ DL NL IISD FPEV
Sbjct: 484 AKLLSTLNKEAAEQGDLTNLIIISDDQFPEV 514
>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
mismatch repair protein MSH3; Short=AtMSH3; AltName:
Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
MSH3 [Arabidopsis thaliana]
Length = 1081
Score = 131 bits (329), Expect = 1e-28
Identities = 67/124 (54%), Positives = 92/124 (74%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
V P+ + +LSSVL + R+ D+QRGITRIFHRTA A+EFIAV++A+++AG+Q+Q+L ++
Sbjct: 511 VSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRTAKATEFIAVMEAILLAGKQIQRLGIKQ 570
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
E +++Q TVRS LLRKLI SSP V D A +LLS LNKEAA + DL ++ I S
Sbjct: 571 DSEMRSMQSATVRSTLLRKLISVISSPVVVDNAGKLLSALNKEAAVRGDLLDILITSSDQ 630
Query: 411 FPEV 422
FPE+
Sbjct: 631 FPEL 634
>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
Length = 1078
Score = 126 bits (317), Expect = 3e-27
Identities = 65/124 (52%), Positives = 92/124 (74%)
Frame = +3
Query: 51 VQPDIHNLLSSVLVTLGRARDVQRGITRIFHRTATASEFIAVIQAVVVAGRQLQKLHVEV 230
V P+ + +LSSVL L R+ D+QRGITRIFHRTA A+EFIAV++A+++AG+Q ++L ++
Sbjct: 509 VSPEFYLVLSSVLTALSRSSDIQRGITRIFHRTAKATEFIAVMEAILLAGKQFKRLGIKQ 568
Query: 231 ADENKNLQVRTVRSILLRKLILTASSPCVTDTAARLLSKLNKEAAEQRDLHNLFIISDGS 410
E +++Q TV+S LL+KLI A+SP V D AA+LLS LNKE A + DL ++ I S
Sbjct: 569 DCEMRSMQSATVQSSLLKKLISVAASPAVVDNAAKLLSALNKEGAVRGDLLDILITSSDQ 628
Query: 411 FPEV 422
FPE+
Sbjct: 629 FPEL 632