BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00014335
         (1170 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   171   4e-79
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   168   1e-76
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   172   9e-76
gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]              166   1e-69
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     158   4e-69
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   154   7e-68
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   152   9e-68
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  152   2e-67
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   149   5e-67
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  149   5e-67
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660...   142   7e-67
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   152   9e-67
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   149   3e-66
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   149   3e-66
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho...   147   4e-66
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   152   5e-66
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   154   6e-66
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]   147   8e-66
emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]   148   2e-65
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   151   2e-65

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  171 bits (433), Expect(2) = 4e-79
 Identities = 98/230 (42%), Positives = 127/230 (55%), Gaps = 6/230 (2%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLY-----QFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSF 1005
            D +T  +L+ G LK GLY     Q KL   +SS         +    PA     S +  F
Sbjct: 450  DPSTRTVLMHGQLKGGLYVFDNTQLKLPLHNSSCFASTALPSKEPTVPA-----SPTSPF 504

Query: 1004 SYDVQIVKTLELWHRRLGNPSFDITKRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHK 825
            +          LWH RLG+PS  I    L+ CN+  +NK     CS C + K HK  F  
Sbjct: 505  T----------LWHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGKIHKSSFLH 554

Query: 824  SVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHF 648
            S    T+PL+LIHTDLWGP+   SS+G  YY+ FID +++F WIY L+ +S+ F VFLHF
Sbjct: 555  STSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHF 614

Query: 647  KSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMGL 498
            KS VE Q   +IK VQSD G E +  T+  +  GIIH+ISCPYT  + GL
Sbjct: 615  KSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGL 664



 Score =  152 bits (383), Expect(2) = 4e-79
 Identities = 70/136 (51%), Positives = 95/136 (69%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            +QNG  ERKHRHI+E G++L+A + +P +YWD+ F  S+YLINR+P   +  KS  EVL+
Sbjct: 660  EQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLF 719

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 154
             Q PSYS L++FGC C+P+ R +N  KL+ RS    FLGYS   KGYK L P G I+ SR
Sbjct: 720  HQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNILISR 779

Query: 153  DVVFNEEIFPFLKTKN 106
            DV+F+E  FPF + ++
Sbjct: 780  DVIFDEXAFPFAQLQS 795


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  168 bits (426), Expect(2) = 1e-76
 Identities = 86/225 (38%), Positives = 134/225 (59%), Gaps = 1/225 (0%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T  +L+ G +++GLY F   + H +++     S+  +   + F +K  + S S    
Sbjct: 465  DQVTQAVLMVGKVRDGLYAFD--SSHLALRPTQSLSKSPSVVASSFSSKVCTTSLS---- 518

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHET 810
               T +LWH+RLG+PS    K  L  CNV+ INK    FCS C + K H+ PF  S    
Sbjct: 519  --STFDLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTY 576

Query: 809  TEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVE 633
            T+PL+LIH DLWGP+ + S++G  YY+ F+D F++F WI+ LR +S+    F++FK+ VE
Sbjct: 577  TKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVE 636

Query: 632  NQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMGL 498
             Q + +IK +Q+D G E +      +E GI+H++SCP+T  + G+
Sbjct: 637  LQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGV 681



 Score =  146 bits (368), Expect(2) = 1e-76
 Identities = 77/168 (45%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG  ERKHR I+E GL+L+  + +P ++WD+ F   +YL NR+P   +  K   EVL+
Sbjct: 677  QQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLF 736

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 154
               P YS L++FGC CFP+ R YN  KL+ RS+   FLGYS + KGYK +   G++  S 
Sbjct: 737  KSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISH 796

Query: 153  DVVFNEEIFPFLKT-KNSSIVLS--QQNVQHLTPSI-PIVLIRVFLCT 22
            DV+FNE  FP+ KT + SS +LS    +  HL+PS  P VL    L T
Sbjct: 797  DVIFNETSFPYSKTIQVSSCLLSTVSPSTSHLSPSASPPVLSPTMLPT 844


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  172 bits (437), Expect(2) = 9e-76
 Identities = 94/225 (41%), Positives = 134/225 (59%), Gaps = 2/225 (0%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T KILL+G+L++GLY+F                 R   SPA F + S  +S +  + 
Sbjct: 472  DQVTKKILLQGSLEHGLYRFPA---------------RFVPSPAAFVSSSYDRSSN--LS 514

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVS-SINKDGVPFCSDCVVSKSHKLPFHKSVHE 813
            +  T  LWH RLG+P+ +I K  L +CN+S   +K+ V  C  C  +KSHKLPF+  V  
Sbjct: 515  LTTTTTLWHSRLGHPADNILKHILTSCNISHQCHKNNV--CCACQFAKSHKLPFNVXVSR 572

Query: 812  TTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLV 636
             + PL L+H DLWGP  + S+ G+ Y+++F+D F++F WIY L ++    +VF+ FKSLV
Sbjct: 573  ASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLV 632

Query: 635  ENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            ENQ N RI+ ++SD G E K  +   +  GI  Q SCPYTP + G
Sbjct: 633  ENQFNSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQNG 677



 Score =  139 bits (350), Expect(2) = 9e-76
 Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 1/140 (0%)
 Frame = -1

Query: 516  PQQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVL 337
            P+QNG  ERK RHIIE GL+L+A + +P ++W   F  +I+LINR+P K + ++S F++L
Sbjct: 673  PEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQIL 732

Query: 336  YAQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLP-GGKIIY 160
            + + P+Y   +IFGC C+P+ R YN +KL  RS   VFLGYS+  KGY  L P  G++  
Sbjct: 733  FGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYV 792

Query: 159  SRDVVFNEEIFPFLKTKNSS 100
            +R VVF+E +FPF  T + S
Sbjct: 793  TRHVVFHETVFPFQSTPDQS 812


>gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]
          Length = 1121

 Score =  166 bits (419), Expect(2) = 1e-69
 Identities = 90/224 (40%), Positives = 127/224 (56%), Gaps = 1/224 (0%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T ++LL+G LK+ LY F   +   S+  C   S    A P                 
Sbjct: 314  DQETKRVLLQGYLKDSLYIF---SDLHSLSSCSVHSMSFIAEPI---------------- 354

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHET 810
               ++  WH R G+ SF+I K+ L +C++   N   + FCS CV  K H+LPF+ S H  
Sbjct: 355  ---SVNQWHERFGHCSFNILKKILASCDIFVSNN--IVFCSSCVRGKCHQLPFYNSTHTY 409

Query: 809  TEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVE 633
            ++PL+LI+TD+WGP+ +  SNG+ YYV F+D ++KF W+Y +  +S   NVF  FK+LVE
Sbjct: 410  SQPLRLIYTDVWGPTSVLVSNGARYYVSFVDAYSKFTWLYLIHHKSQVKNVFKTFKNLVE 469

Query: 632  NQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            NQT  +I  +QSD   E   LT    ECGI H++SCPYT  + G
Sbjct: 470  NQTGYKIHALQSDNAKEYLSLTSYLQECGINHRLSCPYTHEQNG 513



 Score =  125 bits (315), Expect(2) = 1e-69
 Identities = 60/158 (37%), Positives = 97/158 (61%)
 Frame = -1

Query: 513 QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
           +QNG +ERKHRHI+++GL+L++ + +P ++W + F A+++ IN +P   +   + + +L+
Sbjct: 510 EQNGYVERKHRHIVDMGLTLLSTASLPLKFWAEAFVAAVHTINVLPTDVLKGDNPYNMLF 569

Query: 333 AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 154
             PP+Y   ++FGC C+P+ R YN  K   RS   +FL YS +  GY  L   GK I SR
Sbjct: 570 KHPPNYKKFKVFGCACYPNLRPYNQYKFVFRSTCCLFLRYSIRHAGYICLTQDGKTIVSR 629

Query: 153 DVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVLI 40
            VVF+E+ FP+ K   S  V+S  + Q   P+ P + +
Sbjct: 630 HVVFDEKSFPY-KDHPSKFVVSSGSAQEPIPTAPTLSV 666


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  158 bits (399), Expect(2) = 4e-69
 Identities = 75/154 (48%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG+ ERKHRHI+EVGLSL+A++ +P ++WD+ F A+ YLINR P+K I +++  E L+
Sbjct: 602  QQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFIAATYLINRTPSKVIQYETPLEHLF 661

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 157
             Q PSY+ LR+FGC C+P+ R YN  KL+ RS+  VFLGYSN  KG+K L +  G++  S
Sbjct: 662  HQKPSYTSLRVFGCACWPNLRPYNARKLQFRSKQCVFLGYSNLHKGFKCLDVAAGRVYIS 721

Query: 156  RDVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSI 55
            RDVVF+E +FPF    +++    +  +  L P++
Sbjct: 722  RDVVFDENVFPFASLHSNAGARLRSEILLLPPTL 755



 Score =  132 bits (331), Expect(2) = 4e-69
 Identities = 80/225 (35%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T   LLRG   NGLY     T  S                     K +  +      
Sbjct: 409  DQITKNTLLRGPCCNGLYPLPASTSSS---------------------KQVLGA------ 441

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVSSINKDG-VPFCSDCVVSKSHKLPFHKSVHE 813
            I  T+ +WH RLG+PS+ I ++ +   N+  + +   +  C  C   KSH+LPF KS   
Sbjct: 442  IKPTVSIWHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKSHQLPFLKSTSA 501

Query: 812  TTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLV 636
            +  PL+L+ +D+WGP+P  S  G  YYV FID F+KF WIY L+ +S+ F+ F  F+ LV
Sbjct: 502  SNFPLELVFSDVWGPAP-DSVGGRKYYVSFIDDFSKFTWIYLLKQKSEVFHKFHEFQQLV 560

Query: 635  ENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            E    ++I  +Q+D G E + L   F++ GI H +SCP+T  + G
Sbjct: 561  ERIFYRKIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQQNG 605


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  154 bits (390), Expect(2) = 7e-68
 Identities = 73/134 (54%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG+ ERKHRHI+EVGL+L+A S +P ++WD+ F A++YLINR P K + F +  E L+
Sbjct: 611  QQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYLINRTPTKLLQFLTPLEHLF 670

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPG-GKIIYS 157
             Q P YS LR+FGC C+PH R YN  KL+ RS+   FLGYS   KG+K L P  G++  S
Sbjct: 671  NQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTGRVYIS 730

Query: 156  RDVVFNEEIFPFLK 115
            RDV+F+E  FPF K
Sbjct: 731  RDVIFDETNFPFAK 744



 Score =  131 bits (329), Expect(2) = 7e-68
 Identities = 79/227 (34%), Positives = 118/227 (51%), Gaps = 4/227 (1%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            D AT K+L RG  +  LY              P  S      P +    +I  SF     
Sbjct: 413  DLATKKLLFRGPCRGRLYAL------------PSSSPHERPRPLKEAFGAIKPSF----- 455

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVSSI---NKDGVPFCSDCVVSKSHKLPFHKSV 819
                 E WH RLG+P+  I ++ +   N+  +   NK  V  C  C   KSH+LP+ +S 
Sbjct: 456  -----ERWHSRLGHPASPIVEKVISKNNLPCLAESNKQSV--CDACQQGKSHQLPYSRSS 508

Query: 818  HETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFI-DFTKFIWIYFLRAESDTFNVFLHFKS 642
              ++ PL+LI++D+WGP+ L S  G  YYV FI D++KF W+Y ++ +S+    F  F++
Sbjct: 509  SMSSHPLELIYSDVWGPA-LTSVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQA 567

Query: 641  LVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            LVE   N++I  +QSD G E + L   F++ GI H +SCP+T  + G
Sbjct: 568  LVERLFNRKIIAMQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQNG 614


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  152 bits (385), Expect(2) = 9e-68
 Identities = 73/154 (47%), Positives = 105/154 (68%), Gaps = 1/154 (0%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG +ERKHRHI+EVGLSL+A++ +P ++WD+ F A+ YLINR+P+K I F +  E L+
Sbjct: 598  QQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLERLF 657

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 157
             Q P Y  LR FGC C+P+ R YN  KL+ RS+  VFLG+SN  KG+K L +  G++  S
Sbjct: 658  KQTPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNIHKGFKCLDVSTGRVYVS 717

Query: 156  RDVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSI 55
            RDV F+E++FPF     ++    +  +  L P++
Sbjct: 718  RDVTFDEQVFPFANLHPNAGARLRAEISLLPPTL 751



 Score =  132 bits (333), Expect(2) = 9e-68
 Identities = 82/228 (35%), Positives = 116/228 (50%), Gaps = 5/228 (2%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            D+AT + +L G  + GLY              P RS  R A  A                
Sbjct: 407  DKATRRTILEGPCRRGLYPL------------PARSSLRQAFVA---------------- 438

Query: 989  IVKTLELWHRRLGNPSFDITKRALDA----CNVSSINKDGVPFCSDCVVSKSHKLPFHKS 822
               +   WH RLG+PS  I  R L      C  +S+N+     C  C  +K H+LPF +S
Sbjct: 439  -TPSFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNES---VCDACQQAKCHQLPFPRS 494

Query: 821  VHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFK 645
               +  PL+LIH+D+WGP+  +S     YYV FID ++KF+WIYFL+ +S+ F  F  F+
Sbjct: 495  TSVSNNPLELIHSDVWGPAS-ESVGAKKYYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQ 553

Query: 644  SLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
             LVE Q +++I  +Q+D G E   L   F+E GI H +SCP+T  + G
Sbjct: 554  KLVERQFDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNG 601


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  152 bits (385), Expect(2) = 2e-67
 Identities = 72/132 (54%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG+ ERKHRHIIEVGLSL++ + +P ++WD+ F A+ YLINR+P+K I   +  E L+
Sbjct: 611  QQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKLF 670

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 157
             Q P Y  LR+FGC C+PH R YN  KL+ RS+  VFLG+S   KG+K L +  G++  S
Sbjct: 671  NQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYIS 730

Query: 156  RDVVFNEEIFPF 121
            RDVVF+E IFPF
Sbjct: 731  RDVVFDENIFPF 742



 Score =  131 bits (329), Expect(2) = 2e-67
 Identities = 79/228 (34%), Positives = 119/228 (52%), Gaps = 5/228 (2%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T  ILL G  ++GLY                +S  R  S        +S        
Sbjct: 416  DQVTKDILLEGRCRHGLYPIP-------------KSFGRTTSKQALGTTKLS-------- 454

Query: 989  IVKTLELWHRRLGNPSFDITKRALDA----CNVSSINKDGVPFCSDCVVSKSHKLPFHKS 822
                L  WH RLG+PS  I K+ +      C+V S+N+     C+ C  +KS +LP+ +S
Sbjct: 455  ----LSRWHSRLGHPSLPIVKQVISKNNLPCSVESVNQS---VCNACQEAKSRQLPYVRS 507

Query: 821  VHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFK 645
               +  PL+L+ +D+WGP+P +S   + YYV FID F+KF WIY L+ +S+ F  F  F+
Sbjct: 508  TSVSQFPLELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQ 566

Query: 644  SLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            +LVE   +++I  +Q+D G E + L   F++ GI H +SCP+T  + G
Sbjct: 567  ALVERMFDRKIIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQNG 614


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  149 bits (377), Expect(2) = 5e-67
 Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG+ ERKH+HIIEVGLSL++ + +P ++WD+ F A+ YLINRIP+K I   +  E L+
Sbjct: 614  QQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLF 673

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 157
             Q P YS LR+F C C+PH   YN  KL+ RS+  VFLG+S   KG+K L +  G++  S
Sbjct: 674  NQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYIS 733

Query: 156  RDVVFNEEIFPF 121
            RDVVF+E +FPF
Sbjct: 734  RDVVFDENVFPF 745



 Score =  133 bits (334), Expect(2) = 5e-67
 Identities = 79/228 (34%), Positives = 121/228 (53%), Gaps = 5/228 (2%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T  +LL G  ++GLY        S+ K      Q   A+                  
Sbjct: 419  DQVTRDVLLEGKCRHGLYPIPKSFGRSTNK------QALGAAKL---------------- 456

Query: 989  IVKTLELWHRRLGNPSFDITKRALDA----CNVSSINKDGVPFCSDCVVSKSHKLPFHKS 822
               +L  WH RLG+PS  I K+ +      C+V S+N+     C+ C  +KSH+LP+ +S
Sbjct: 457  ---SLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQS---VCNACQEAKSHQLPYIRS 510

Query: 821  VHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFK 645
               +  PL+L+ +D+WGP+P +S   + YYV FID F+KF WIY L+ +S+ F  F  F+
Sbjct: 511  TSVSQFPLELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQ 569

Query: 644  SLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            +LVE   +++I  +Q+D G E + L   F++ GI H +SCP+T  + G
Sbjct: 570  ALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNG 617


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  149 bits (377), Expect(2) = 5e-67
 Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG+ ERKH+HIIEVGLSL++ + +P ++WD+ F A+ YLINRIP+K I   +  E L+
Sbjct: 614  QQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLF 673

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 157
             Q P YS LR+F C C+PH   YN  KL+ RS+  VFLG+S   KG+K L +  G++  S
Sbjct: 674  NQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYIS 733

Query: 156  RDVVFNEEIFPF 121
            RDVVF+E +FPF
Sbjct: 734  RDVVFDENVFPF 745



 Score =  133 bits (334), Expect(2) = 5e-67
 Identities = 79/228 (34%), Positives = 121/228 (53%), Gaps = 5/228 (2%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T  +LL G  ++GLY        S+ K      Q   A+                  
Sbjct: 419  DQVTRDVLLEGKCRHGLYPIPKSFGRSTNK------QALGAAKL---------------- 456

Query: 989  IVKTLELWHRRLGNPSFDITKRALDA----CNVSSINKDGVPFCSDCVVSKSHKLPFHKS 822
               +L  WH RLG+PS  I K+ +      C+V S+N+     C+ C  +KSH+LP+ +S
Sbjct: 457  ---SLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQS---VCNACQEAKSHQLPYIRS 510

Query: 821  VHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFK 645
               +  PL+L+ +D+WGP+P +S   + YYV FID F+KF WIY L+ +S+ F  F  F+
Sbjct: 511  TSVSQFPLELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQ 569

Query: 644  SLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            +LVE   +++I  +Q+D G E + L   F++ GI H +SCP+T  + G
Sbjct: 570  ALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNG 617


>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
          Length = 868

 Score =  142 bits (358), Expect(2) = 7e-67
 Identities = 65/159 (40%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
 Frame = -2

Query: 971  LWHRRLGNPSFDITKRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQL 792
            LWH RLG+P           C++   +K     CS C + KSH+LP   S    ++P +L
Sbjct: 568  LWHSRLGHPHHHALTEVFKLCHLPVPSKPLAELCSACCLGKSHRLPTSLSATVYSQPFEL 627

Query: 791  IHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKR 615
            +  DLWGP+P+QS  G NY++  +D F++F+W++ LR +SDT   F+ FK +VE Q N  
Sbjct: 628  VVCDLWGPAPMQSLGGYNYFLTCVDAFSRFVWVFPLRLKSDTLPQFIQFKKMVELQFNYP 687

Query: 614  IKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMGL 498
            IK VQS+GG E +P TK  ++ GI+H+ +CP+T ++ G+
Sbjct: 688  IKSVQSNGGGEFRPFTKYLNDLGIVHRFTCPHTHHQNGI 726



 Score =  140 bits (352), Expect(2) = 7e-67
 Identities = 65/130 (50%), Positives = 87/130 (66%)
 Frame = -1

Query: 510  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 331
            QNG +ERKHR+ +E GL+L+A S +P ++WD  F  + YLINR+P+ ++  +S +  L  
Sbjct: 723  QNGIVERKHRYTVETGLALLAQSTLPLKFWDHSFVTAAYLINRLPSVSLNNQSLYFKLLN 782

Query: 330  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 151
            + P YS LR+FGC CFP  R YN  KL+ RSQ  +FLGYS   KGYK L P G I  S+D
Sbjct: 783  KQPDYSCLRVFGCSCFPFLRPYNSHKLDYRSQECIFLGYSTAHKGYKCLAPNGHIYISKD 842

Query: 150  VVFNEEIFPF 121
            V+F E  FP+
Sbjct: 843  VLFQESKFPY 852


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  152 bits (383), Expect(2) = 9e-67
 Identities = 74/154 (48%), Positives = 105/154 (68%), Gaps = 1/154 (0%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG+ ERKHRHI+E+GLSL++++ +P ++WD+ F  + YLINR+P++ I   S  E L+
Sbjct: 605  QQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLF 664

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 157
             Q P YS LRIFGC C+P+ R YN  KL+ RS+  VFLG+S   KG+K L +  G+I  S
Sbjct: 665  KQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCLEVSTGRIYIS 724

Query: 156  RDVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSI 55
            RDVVF+E IFPF +   ++    +  +  LTP +
Sbjct: 725  RDVVFDENIFPFTELHANAGARLRSEIDILTPEL 758



 Score =  130 bits (326), Expect(2) = 9e-67
 Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 1/224 (0%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T K LL+G     LY       HSS+K                      +++S    
Sbjct: 415  DQITRKTLLKGRSWRRLYPLP----HSSLK----------------------QAYS---A 445

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHET 810
            I  +L+ WH RLG+PS    K+ ++  ++   +      C+ C  +KSH+LPF  S   +
Sbjct: 446  IKLSLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVS 505

Query: 809  TEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVE 633
              PL+L+ +D+WGP+P +S     YYV FID F+KF WIY ++ +S  F+ F  F+ +VE
Sbjct: 506  KHPLELVFSDVWGPAP-ESVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVE 564

Query: 632  NQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
             Q +++I  +Q+D G E + L   FS+ GI+H +SCP+T  + G
Sbjct: 565  RQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNG 608


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  149 bits (377), Expect(2) = 3e-66
 Identities = 88/227 (38%), Positives = 121/227 (53%), Gaps = 4/227 (1%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T KILL+G L++GLY+F                   ++SP R      + SFS    
Sbjct: 440  DQVTKKILLKGWLRDGLYEFS------------------SSSPPRAF--VTTGSFSDGA- 478

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVS---SINKDGVPFCSDCVVSKSHKLPFHKSV 819
                  +WH RLG+P+  I  +AL +CN S    INK  +  C  C ++KSH LP+  S 
Sbjct: 479  ------IWHSRLGHPAVPILSKALASCNPSVTLQINK--IAPCIICPLAKSHSLPYSLSS 530

Query: 818  HETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKS 642
               + PL LIHTDLWGP+P  S  G+ Y+++FID +++  WIYFL  +      F+ F+ 
Sbjct: 531  SHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQSFITFRK 590

Query: 641  LVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            +VENQ    IK +QSD G E           GI+HQ SCP+TP + G
Sbjct: 591  MVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNG 637



 Score =  130 bits (328), Expect(2) = 3e-66
 Identities = 70/159 (44%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
 Frame = -1

Query: 516  PQQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVL 337
            PQQNG  ERK RH++E GL+LMA S +P +YW   F  ++YLIN +P K + F+S  + L
Sbjct: 633  PQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTL 692

Query: 336  YAQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIY 160
            + + P+Y HLR+FGC CFP  R Y   KL  RS + VFLGY+   KGY  L +   +I  
Sbjct: 693  FHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYI 752

Query: 159  SRDVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVL 43
            SR+V+F+E  FPF  +   S         HL  S P ++
Sbjct: 753  SRNVIFHESSFPFQSSSPPS-----SPSPHLPSSTPALI 786


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  149 bits (377), Expect(2) = 3e-66
 Identities = 88/227 (38%), Positives = 121/227 (53%), Gaps = 4/227 (1%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T KILL+G L++GLY+F                   ++SP R      + SFS    
Sbjct: 440  DQVTKKILLKGWLRDGLYEFS------------------SSSPPRAF--VTTGSFSDGA- 478

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVS---SINKDGVPFCSDCVVSKSHKLPFHKSV 819
                  +WH RLG+P+  I  +AL +CN S    INK  +  C  C ++KSH LP+  S 
Sbjct: 479  ------IWHSRLGHPAVPILSKALASCNPSVTLQINK--IAPCIICPLAKSHSLPYSLSS 530

Query: 818  HETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKS 642
               + PL LIHTDLWGP+P  S  G+ Y+++FID +++  WIYFL  +      F+ F+ 
Sbjct: 531  SHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQSFITFRK 590

Query: 641  LVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            +VENQ    IK +QSD G E           GI+HQ SCP+TP + G
Sbjct: 591  MVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNG 637



 Score =  130 bits (328), Expect(2) = 3e-66
 Identities = 70/159 (44%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
 Frame = -1

Query: 516  PQQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVL 337
            PQQNG  ERK RH++E GL+LMA S +P +YW   F  ++YLIN +P K + F+S  + L
Sbjct: 633  PQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTL 692

Query: 336  YAQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIY 160
            + + P+Y HLR+FGC CFP  R Y   KL  RS + VFLGY+   KGY  L +   +I  
Sbjct: 693  FHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYI 752

Query: 159  SRDVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVL 43
            SR+V+F+E  FPF  +   S         HL  S P ++
Sbjct: 753  SRNVIFHESSFPFQSSSPPS-----SPSPHLPSSTPALI 786


>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
            gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
            protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  147 bits (372), Expect(2) = 4e-66
 Identities = 70/134 (52%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG +ERKHRHI+E+GLSL+A++ +P ++WD+ F A+ YLINR+P K I F +    L+
Sbjct: 599  QQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLF 658

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 157
             Q P Y  LR FGC C+P+ R YN  KL+ RS+  VFLG+SN  KG+K L +  G++  S
Sbjct: 659  HQQPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNLHKGFKCLEVATGQVYIS 718

Query: 156  RDVVFNEEIFPFLK 115
            RDV F+E+ FPF K
Sbjct: 719  RDVTFDEQEFPFSK 732



 Score =  132 bits (332), Expect(2) = 4e-66
 Identities = 67/165 (40%), Positives = 99/165 (60%), Gaps = 2/165 (1%)
 Frame = -2

Query: 989 IVKTLELWHRRLGNPSFDITKRALDACNVSSINKD-GVPFCSDCVVSKSHKLPFHKSVHE 813
           ++ + E WH RLG+ S  I  R ++   +   N+      C  C   KSH+LPF K    
Sbjct: 439 VMPSFERWHGRLGHASKPIVLRVINQNKLPCSNESPSESVCDACQQGKSHQLPFPKFFSV 498

Query: 812 TTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLV 636
           ++ PL+LIH+D+WGP+   S     YYV FID ++KF+WIYFL+ +S+ F  F  F+S+V
Sbjct: 499 SSNPLELIHSDVWGPAS-DSVGAKRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMV 557

Query: 635 ENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
           E Q N++I  +Q+D G E + L   F + GI HQ+SCP+T  + G
Sbjct: 558 ERQFNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNG 602


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  152 bits (383), Expect(2) = 5e-66
 Identities = 76/141 (53%), Positives = 95/141 (67%), Gaps = 2/141 (1%)
 Frame = -1

Query: 513  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 334
            QQNG  ERKHRHI+EVGL+L+A S +P +YWD  F A++YLINR P+K I   +    L 
Sbjct: 611  QQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPSKTIAHDTPLHKLT 670

Query: 333  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 157
               P YS LRIFGC C+P+ R YN  KL+ RS   VFLGYSN  KG+K L +  G+I  S
Sbjct: 671  GATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDISTGRIYIS 730

Query: 156  RDVVFNEEIFPFLK-TKNSSI 97
            RDVVF+E +FPF    KN+ +
Sbjct: 731  RDVVFDEHVFPFASLNKNAGV 751



 Score =  127 bits (320), Expect(2) = 5e-66
 Identities = 78/225 (34%), Positives = 114/225 (50%), Gaps = 2/225 (0%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            D+ T  +LL G  ++GLY              P+   + N S  R               
Sbjct: 417  DRQTKAVLLHGKCRDGLYPLPPH---------PDLRLKHNFSSTRVP------------- 454

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVSSI-NKDGVPFCSDCVVSKSHKLPFHKSVHE 813
                LE WH+RLG+PS DI  R +   N+  + N      C  C+ +K+H+LP+  S+ +
Sbjct: 455  ----LEHWHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSVCDACLQAKAHQLPYTISMSQ 510

Query: 812  TTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLV 636
            ++ PL LI +D++GP+ + S     YYV FID ++KF WIY LR +SD +  F  F+ LV
Sbjct: 511  SSAPLMLIFSDVFGPA-IDSFGRYKYYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQHLV 569

Query: 635  ENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            E    ++I   QSD G E + L   F   GI HQ+SCP+T  + G
Sbjct: 570  ERMFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQNG 614


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  154 bits (389), Expect(2) = 6e-66
 Identities = 77/224 (34%), Positives = 125/224 (55%), Gaps = 1/224 (0%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            D  T  +L +G L+NGLY+F + +               N  P    N + +    +   
Sbjct: 439  DLHTKMVLAQGKLENGLYKFPVFS---------------NLKPYSSINNASAFHSQFSST 483

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHET 810
            +    ELWH RLG+ SFDI  + ++ CNV+S  K     CSDC ++KSH+LP   S    
Sbjct: 484  VENKAELWHNRLGHASFDIVSKVMNTCNVAS-GKYKSFVCSDCQLAKSHRLPTQLSNFHA 542

Query: 809  TEPLQLIHTDLWGPSPLQSSNGSNYYVVFI-DFTKFIWIYFLRAESDTFNVFLHFKSLVE 633
            ++PL+L++TD+WGP+ ++S++G+ Y+++F+ D++++ W Y L+ +     +F  FK  +E
Sbjct: 543  SKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKXFKLQME 602

Query: 632  NQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            NQ + +IK +QSD G E +  T      GI H+ SCPY   + G
Sbjct: 603  NQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQNG 646



 Score =  125 bits (313), Expect(2) = 6e-66
 Identities = 58/138 (42%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
 Frame = -1

Query: 510  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 331
            QNG +ERKHRH++E GL+L++++ +P +YW   F    +LINR+P+K + + S +  L+ 
Sbjct: 644  QNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFR 703

Query: 330  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYSR 154
            + P Y   R+FGC C+P  R YN  KL+ RS   +FLGYS   KG+  L    G++  + 
Sbjct: 704  RHPDYKSFRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITP 763

Query: 153  DVVFNEEIFPFLKTKNSS 100
             VVF+E  FP  ++K+SS
Sbjct: 764  HVVFDESTFPLAQSKSSS 781


>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
          Length = 1394

 Score =  147 bits (370), Expect(2) = 8e-66
 Identities = 82/227 (36%), Positives = 123/227 (54%), Gaps = 4/227 (1%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T + LL+G L++GLY+F                   ++S   F + S        V 
Sbjct: 445  DQVTKQTLLKGWLRDGLYEFP-----------------SSSSTHAFVSTS-------SVP 480

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVS---SINKDGVPFCSDCVVSKSHKLPFHKSV 819
             +    +WH RLG+P+  I  +AL +CN S    INK  +  C  C ++KSH L +  S 
Sbjct: 481  ALTPGAIWHSRLGHPAXPILSKALASCNPSVSFQINK--IAPCKICPLAKSHSLXYSLSS 538

Query: 818  HETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKS 642
               ++PL LIHTDLWG +P  S++G+ Y+++FID ++++ WIYFL  +    + F+ F+ 
Sbjct: 539  SHASQPLALIHTDLWGXAPSPSTSGAXYFLLFIDDYSRYTWIYFLSTKDQALSTFITFRK 598

Query: 641  LVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            ++ENQ N  IK +QSD G E           GI+HQ SCP+TP + G
Sbjct: 599  MIENQLNSTIKCIQSDNGGEFIAFKPYLEAHGIVHQFSCPHTPQQNG 645



 Score =  132 bits (331), Expect(2) = 8e-66
 Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
 Frame = -1

Query: 516  PQQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVL 337
            PQQNG  ERK  H++E G++L+A S +P +YW   F  S+YLIN +P K + F+S  +VL
Sbjct: 641  PQQNGRAERKICHLVETGMALLAQSFLPSKYWSFAFQTSVYLINLLPAKLLNFQSPLQVL 700

Query: 336  YAQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIY 160
            + + P+Y HLR+FGC CFP  R  N  KL  RS + VFLGY++  KGY  L +   ++  
Sbjct: 701  FHKIPNYHHLRVFGCLCFPSLRPXNHHKLSYRSTACVFLGYASAHKGYICLDVSTSRLYI 760

Query: 159  SRDVVFNEEIFPF 121
            SRDV+F+E  FPF
Sbjct: 761  SRDVLFHESSFPF 773


>emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]
          Length = 828

 Score =  148 bits (373), Expect(2) = 2e-65
 Identities = 86/227 (37%), Positives = 121/227 (53%), Gaps = 4/227 (1%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            DQ T KILL+G L++GLY+F                   ++ P  F   S   SFS    
Sbjct: 343  DQVTKKILLKGWLRDGLYEFS-----------------SSSPPRAFVTTS---SFSDGA- 381

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVS---SINKDGVPFCSDCVVSKSHKLPFHKSV 819
                  +WH RLG+P+  I  +AL +CN      INK  +  C  C ++KSH LP+  S 
Sbjct: 382  ------IWHSRLGHPAAPILSKALASCNPFVKLQINK--IAPCIICPLAKSHSLPYSLSS 433

Query: 818  HETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKS 642
               + PL LIHTDLWGP+P  S  G+ Y+++FID +++  WIYFL  +    + F+ F+ 
Sbjct: 434  SHVSHPLALIHTDLWGPAPSISITGARYFLIFIDDYSRHTWIYFLSTKDQVLHSFITFRK 493

Query: 641  LVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            ++ENQ +  IK +QSD G E           GI+HQ SCP+TP + G
Sbjct: 494  MIENQLHTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNG 540



 Score =  129 bits (325), Expect(2) = 2e-65
 Identities = 64/133 (48%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
 Frame = -1

Query: 516 PQQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVL 337
           PQQNG  ERK RH++E GL+LMA S +P +YW   F  ++YLIN +P K + F+S  + L
Sbjct: 536 PQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPIQAL 595

Query: 336 YAQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIY 160
           + + P+Y HLR+FGC CFP  R Y   KL  RS + VFLGY+    GY  L +   +I  
Sbjct: 596 FHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHNGYLCLDVSTSRIYI 655

Query: 159 SRDVVFNEEIFPF 121
           SR+V+F+E  FPF
Sbjct: 656 SRNVIFHESYFPF 668


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  151 bits (381), Expect(2) = 2e-65
 Identities = 78/224 (34%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
 Frame = -2

Query: 1169 DQATGKILLRGNLKNGLYQFKLKTRHSSVKVCPERSQRRNASPARFQNKSISKSFSYDVQ 990
            D  T ++L +G L+NGLY+F            P  S ++ A      + +   S      
Sbjct: 436  DLHTKRVLAQGKLENGLYKF------------PVISNKKTAYVGITNDSTFQCS-----N 478

Query: 989  IVKTLELWHRRLGNPSFDITKRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHET 810
            I    ELWH RLG+ + DI  R +  CNVS   K     CS C ++KSH+LP H S    
Sbjct: 479  IENKRELWHHRLGHAATDIVTRIMHNCNVSC-GKYKATVCSSCQLAKSHRLPTHLSSFHA 537

Query: 809  TEPLQLIHTDLWGPSPLQSSNGSNYYVVFI-DFTKFIWIYFLRAESDTFNVFLHFKSLVE 633
            ++PL+L++TD+WGP+ + S++G+ Y+++F+ D++++ W+Y L+++     +F  FK  VE
Sbjct: 538  SKPLELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVE 597

Query: 632  NQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYTPNKMG 501
            NQ   +IK +Q D G E +       E GI+H+ SCPY  ++ G
Sbjct: 598  NQFEAKIKCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQNG 641



 Score =  126 bits (316), Expect(2) = 2e-65
 Identities = 63/138 (45%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
 Frame = -1

Query: 510  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 331
            QNG +ERKHRH++E GL+L+A++G+P ++W   F  + +LINR+P+K +   S +  L+ 
Sbjct: 639  QNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFK 698

Query: 330  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYSR 154
            + P Y  LR+FGC C+P  R YN  KL+ RS   VFLGYS   KGY  L    G++  S 
Sbjct: 699  RNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSP 758

Query: 153  DVVFNEEIFPFLKTKNSS 100
             VVF+E  FPF +  +SS
Sbjct: 759  HVVFDETQFPFAQNISSS 776