BLASTX nr result

ID: Rehmannia26_contig00014319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00014319
         (365 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG43412.1| cycloidea [Solanum lycopersicum]                        72   8e-11
gb|EOY13178.1| TCP family transcription factor 4, putative [Theo...    58   1e-06
ref|XP_002519561.1| conserved hypothetical protein [Ricinus comm...    58   1e-06
gb|ACV95483.1| TCP4 [Citrus trifoliata]                                56   6e-06
ref|XP_006370036.1| hypothetical protein POPTR_0001s38480g [Popu...    55   1e-05

>gb|AAG43412.1| cycloidea [Solanum lycopersicum]
          Length = 396

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
 Frame = -1

Query: 242 QELLFHQNQLHYGRRLETXXXXXXXXXXXXXXPKKRSYFPSSSSLGPTSEHGSS------ 81
           Q+  F+Q+ L YGR                  PKKRSY PS+SSLG   EH ++      
Sbjct: 61  QQPFFNQHHLIYGR------LDSQQLLPPQPTPKKRSYLPSTSSLGQNVEHAAALRGKMA 114

Query: 80  -SSRLGMKNTVGEIVEVQGGHIVRSTG 3
            +SRLG++NTVGEIVEVQGGHIVRSTG
Sbjct: 115 ETSRLGIRNTVGEIVEVQGGHIVRSTG 141


>gb|EOY13178.1| TCP family transcription factor 4, putative [Theobroma cacao]
          Length = 592

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 13/60 (21%)
 Frame = -1

Query: 143 KKRSYFPSSSS-------------LGPTSEHGSSSSRLGMKNTVGEIVEVQGGHIVRSTG 3
           KKR+YF SSSS             +G +    ++SSRLG+++T GEIVEVQGGHIVRSTG
Sbjct: 128 KKRTYFASSSSSAFGSKSTEHARTMGDSHHQAATSSRLGIRHTGGEIVEVQGGHIVRSTG 187


>ref|XP_002519561.1| conserved hypothetical protein [Ricinus communis]
           gi|223541258|gb|EEF42810.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 595

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/65 (53%), Positives = 38/65 (58%), Gaps = 18/65 (27%)
 Frame = -1

Query: 143 KKRSYFPSSSSLGPTSEHG------------------SSSSRLGMKNTVGEIVEVQGGHI 18
           KKRS+F SSSS     E G                  + SSRLG +NTVGEIVEVQGGHI
Sbjct: 151 KKRSHFSSSSSTSIIQEQGFEYARKMGESQRQHQQQPARSSRLGTRNTVGEIVEVQGGHI 210

Query: 17  VRSTG 3
           VRSTG
Sbjct: 211 VRSTG 215


>gb|ACV95483.1| TCP4 [Citrus trifoliata]
          Length = 426

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = -1

Query: 110 LGPTSEHGSSSSRLGMKNTVGEIVEVQGGHIVRSTG 3
           +G +  H  +SSRLGM+NT GEIVEVQGGHIVRSTG
Sbjct: 1   MGESHNHAITSSRLGMRNTGGEIVEVQGGHIVRSTG 36


>ref|XP_006370036.1| hypothetical protein POPTR_0001s38480g [Populus trichocarpa]
           gi|550349183|gb|ERP66605.1| hypothetical protein
           POPTR_0001s38480g [Populus trichocarpa]
          Length = 414

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = -1

Query: 110 LGPTSEHGSSSSRLGMKNTVGEIVEVQGGHIVRSTG 3
           +G +    ++SSRLG++NTVGEIVEVQGGHIVRSTG
Sbjct: 1   MGESHHQAATSSRLGIRNTVGEIVEVQGGHIVRSTG 36


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