BLASTX nr result

ID: Rehmannia26_contig00014279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00014279
         (890 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                60   1e-12

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 60.5 bits (145), Expect(2) = 1e-12
 Identities = 50/203 (24%), Positives = 77/203 (37%), Gaps = 4/203 (1%)
 Frame = -3

Query: 888 QYVSLKCDVGFL*ILDEVKVTNSFHVTKMIVNGDLEEIQEFTKRXXXXXXXXXXXXXXXX 709
           Q+  +K D+       ++KV +SF VT++ VN D  E QEF  R                
Sbjct: 206 QFCRVKVDLS----TGDIKVCSSFDVTQIWVNSDFPEFQEFRDR---------------- 245

Query: 708 XXXXXVSHRLRKTSNTTHSISQITVPSSRTVAGDLASGEAPIRTVEQLYSSKEVT*SNS* 529
                    L+       SI  ++  S  +   D +SG+  + T+ ++Y  KE       
Sbjct: 246 ---------LKGEQTPMRSIVSMSNMSYGSAFEDFSSGQMNVFTISEIYQKKEY------ 290

Query: 528 LLYIVIAFCXXXXXXXXXXXXXXX*VGSFWVCATIISFIG--EWWYISCKK--CPKKLTK 361
                                     G FWV A I+      +W+Y+SCK   C KKLT 
Sbjct: 291 --------------------------GDFWVAAKIVGIESSWDWFYVSCKSHGCNKKLTL 324

Query: 360 AGEKFYCERCDAFYQFGNFRYLI 292
               + C++C   +Q G  RY +
Sbjct: 325 RNTLYDCDKCKRTWQEGILRYRV 347



 Score = 39.7 bits (91), Expect(2) = 1e-12
 Identities = 15/40 (37%), Positives = 27/40 (67%)
 Frame = -2

Query: 202 YRMQLQVVDPTWNASLLCWDMDCEKLIGIPCSELRKSLTE 83
           YR++++ VD   NA  + WD +C +L+GI  ++LR+ + E
Sbjct: 345 YRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQKILE 384


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