BLASTX nr result

ID: Rehmannia26_contig00014258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00014258
         (346 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]           77   2e-12
dbj|BAN14901.1| repressor of silencing 1 [Nicotiana benthamiana]       72   6e-11
ref|XP_004246565.1| PREDICTED: protein ROS1-like [Solanum lycope...    69   5e-10
ref|XP_006341256.1| PREDICTED: protein ROS1-like [Solanum tubero...    66   5e-09
ref|XP_004249459.1| PREDICTED: transcriptional activator DEMETER...    56   4e-06
dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]          56   4e-06
dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]          56   4e-06

>dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]
          Length = 1796

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
 Frame = +1

Query: 31  IVCTRGKCQIVFSDVTHDKETNTAQVRMNPDGQRTPRSPSDSICSSTYSAL-ERQVRGLK 207
           I C+RGKC+I+FSD THDK+ +  ++        TP+SP+ S CSS+   + E   R LK
Sbjct: 432 IACSRGKCKIIFSDETHDKQASILEM--------TPKSPNGSNCSSSACLIQETPERALK 483

Query: 208 RQNMGTAGESELCNRNEIVNY-NPLQACLSI------FSQTTPGLHFPTIYKK 345
           R++     E+EL + N +  Y N +QA  +I      ++ +T G+HFPTIYKK
Sbjct: 484 RRHSFRTNEAELYSTNVMGAYFNSMQAYQAILPANEPYAHSTQGMHFPTIYKK 536


>dbj|BAN14901.1| repressor of silencing 1 [Nicotiana benthamiana]
          Length = 1796

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 8/113 (7%)
 Frame = +1

Query: 31  IVCTRGKCQIVFSDVTHDKETNTAQVRMNPDGQRTPRSPSDSICSSTYSAL-ERQVRGLK 207
           I C+RGKC+I+FSD THDK+ +  ++        TP+S + S CSS+   + E   R LK
Sbjct: 432 IACSRGKCKIIFSDETHDKQASILEM--------TPKSLNGSNCSSSACLIQEAPERALK 483

Query: 208 RQNMGTAGESELCNRN-EIVNYNPLQACLSI------FSQTTPGLHFPTIYKK 345
           R+      E+EL + N +   +N +QA  +I      ++  T G+HFPTIYKK
Sbjct: 484 RRRSSITNEAELYSTNVKGAYFNSMQAYQAILPANEPYAHRTQGMHFPTIYKK 536


>ref|XP_004246565.1| PREDICTED: protein ROS1-like [Solanum lycopersicum]
          Length = 1795

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 8/111 (7%)
 Frame = +1

Query: 37  CTRGKCQIVFSDVTHDKETNTAQVRMNPDGQRTPRSPSDSICSSTYSAL-ERQVRGLKRQ 213
           C+RGKC+IVFSD THDK+ +  ++        TP+SP+ S CSS+   + E   R LKR+
Sbjct: 439 CSRGKCKIVFSDETHDKQASILEM--------TPKSPNSSNCSSSACLIPETPERALKRR 490

Query: 214 NMGTAGESELCNRN-EIVNYNPLQACLSI------FSQTTPGLHFPTIYKK 345
                 +++L + N     +N +QA  +I      ++Q+T G+HFP I+KK
Sbjct: 491 RSLRTDQAKLYSTNVRGAYFNSMQAYQAILPATEPYAQSTQGMHFPIIFKK 541


>ref|XP_006341256.1| PREDICTED: protein ROS1-like [Solanum tuberosum]
          Length = 1913

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
 Frame = +1

Query: 40  TRGKCQIVFSDVTHDKETNTAQVRMNPDGQRTPRSPSDSICSSTYSAL-ERQVRGLKRQN 216
           +RGKC+IVFSD THDK  +  ++        TP+SP+ S CSS+   + E   R LKR+ 
Sbjct: 557 SRGKCKIVFSDETHDKLASILEM--------TPKSPNSSNCSSSACLIPETPERALKRRR 608

Query: 217 MGTAGESELCNRN-EIVNYNPLQACLSI------FSQTTPGLHFPTIYKK 345
                +++L + N     +N +QA  +I      ++Q+T G+HFP IYKK
Sbjct: 609 SFRTDQAKLYSTNIRGAYFNSMQAYQAILPATEPYAQSTEGMHFPIIYKK 658


>ref|XP_004249459.1| PREDICTED: transcriptional activator DEMETER-like [Solanum
           lycopersicum]
          Length = 1824

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
 Frame = +1

Query: 16  MPGDQIVCTRGKCQIVFSDVTHDKETNTAQVRMNPDGQRTPRSPSDSICSSTYSALERQV 195
           M G+    TRG  +I+FSDVTHDK+ +  Q+        TP+S  +S C S  S+     
Sbjct: 532 MVGNHNESTRGNSRIIFSDVTHDKQASILQM--------TPQS-LNSNCGS--SSCLPHG 580

Query: 196 RGLKRQNMGTAGESELCNRNEIVNY-NPLQACLSIFSQTTP------GLHFPTIYKK 345
           +GLKRQ+     E++  + N    Y N +QA  +I     P      G+HFP IYKK
Sbjct: 581 KGLKRQHSCRTDEAQFYSINAKGTYFNSMQAYQAILPANKPDVYSNVGMHFPAIYKK 637


>dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]
          Length = 1673

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
 Frame = +1

Query: 22  GDQIVCTRGKCQIVFSDVTHDKETNTAQVRMNPDGQRTPRSPSDSICSSTYSALERQVRG 201
           G+Q   TRG  +I FSD+T DK+ +  Q+        TP+SP+ S CSS  S      +G
Sbjct: 498 GNQNESTRGNYRINFSDLTRDKQASIVQM--------TPQSPNCSNCSS--STCLPHGKG 547

Query: 202 LKRQNMGTAGESELCNRN-EIVNYNPLQACLSIFSQTTP------GLHFPTIYKK 345
           LKRQ+     E++  + N   V +N +QA  +I     P      G+H P IYKK
Sbjct: 548 LKRQHSYRTDEAQFYSLNARGVYFNSMQAYQAILPANEPEVYSNLGMHCPAIYKK 602


>dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]
          Length = 1673

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
 Frame = +1

Query: 22  GDQIVCTRGKCQIVFSDVTHDKETNTAQVRMNPDGQRTPRSPSDSICSSTYSALERQVRG 201
           G+Q   TRG  +I FSD+T DK+ +  Q+        TP+SP+ S CSS  S      +G
Sbjct: 498 GNQNESTRGNYRINFSDLTRDKQASIVQM--------TPQSPNCSNCSS--STCLPHGKG 547

Query: 202 LKRQNMGTAGESELCNRN-EIVNYNPLQACLSIFSQTTP------GLHFPTIYKK 345
           LKRQ+     E++  + N   V +N +QA  +I     P      G+H P IYKK
Sbjct: 548 LKRQHSYRTDEAQFYSLNARGVYFNSMQAYQAILPANEPEVYSNLGMHCPAIYKK 602


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