BLASTX nr result

ID: Rehmannia26_contig00014244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00014244
         (521 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS64524.1| hypothetical protein M569_10253, partial [Genlise...   112   4e-23
gb|AAU90340.1| hypothetical protein SDM1_56t00017 [Solanum demis...    88   1e-15
dbj|BAO49729.1| nuclear pore complex protein NDC1b [Nicotiana be...    88   1e-15
dbj|BAO49728.1| nuclear pore complex protein NDC1a [Nicotiana be...    88   1e-15
ref|XP_004235481.1| PREDICTED: uncharacterized protein LOC101265...    82   7e-14

>gb|EPS64524.1| hypothetical protein M569_10253, partial [Genlisea aurea]
          Length = 550

 Score =  112 bits (281), Expect = 4e-23
 Identities = 65/156 (41%), Positives = 78/156 (50%)
 Frame = -1

Query: 488 IDRTLFKDKDGGGGAAHTTIIKHRFLSFLIWQSLQSTFILFLSKTLFLSPFTKNPFSPNX 309
           ++R+LFKDKDGGG  A   I+KHRFLSFLIWQ L S+F+ FL+KTL LS F+ N FSP  
Sbjct: 1   VERSLFKDKDGGGAGADGAIVKHRFLSFLIWQFLFSSFLFFLTKTLLLSAFSGNLFSP-- 58

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXSPHPLPFASPFEVSLSFVRLIFVSGGDQNXXXXXXX 129
                                   SP+PLPFA+P E+ LS  RLIFVSG DQ        
Sbjct: 59  ASLFSFFSFHSSLLLFSISLFFVSSPNPLPFATPLEILLSLGRLIFVSGSDQTLLRKKVR 118

Query: 128 XXXXXXXXXXXXXXXXXXXXXXVCWGCDAYYNVDSR 21
                                 +CW C  + N DSR
Sbjct: 119 VSLGFLLFLSLTAVSGATVVLSLCWACGCFRNADSR 154


>gb|AAU90340.1| hypothetical protein SDM1_56t00017 [Solanum demissum]
          Length = 612

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 49/107 (45%), Positives = 60/107 (56%)
 Frame = -1

Query: 488 IDRTLFKDKDGGGGAAHTTIIKHRFLSFLIWQSLQSTFILFLSKTLFLSPFTKNPFSPNX 309
           ++R+LF+DKDGG     T ++KHRFL FLIWQ+LQST + FLSKTL LS FT+ PF P+ 
Sbjct: 6   VERSLFRDKDGG-----TKVVKHRFLGFLIWQALQSTAVFFLSKTLLLSLFTRTPFKPSF 60

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXSPHPLPFASPFEVSLSFVRLIFV 168
                                   SP P   ASPFE+ L   RLI V
Sbjct: 61  LSIFAFIVFHFSLLIFSTSLFIISSPRPQRAASPFELLLGTARLILV 107


>dbj|BAO49729.1| nuclear pore complex protein NDC1b [Nicotiana benthamiana]
          Length = 558

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 53/113 (46%), Positives = 64/113 (56%)
 Frame = -1

Query: 506 MSISAAIDRTLFKDKDGGGGAAHTTIIKHRFLSFLIWQSLQSTFILFLSKTLFLSPFTKN 327
           MS+S  ++R+LFKDKDGG     +T+IKHRFL FLIWQ+LQST + FLSKTL LS FT  
Sbjct: 1   MSLSM-VERSLFKDKDGG-----STVIKHRFLGFLIWQALQSTAVFFLSKTLLLSLFTPT 54

Query: 326 PFSPNXXXXXXXXXXXXXXXXXXXXXXXXXSPHPLPFASPFEVSLSFVRLIFV 168
           PF P+                         SP P   ASP E+ L  V+LI V
Sbjct: 55  PFKPSFLSLLAFIVFHFSLLIFSTSLFVISSPRPHRAASPLELLLGSVKLILV 107


>dbj|BAO49728.1| nuclear pore complex protein NDC1a [Nicotiana benthamiana]
          Length = 558

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 53/113 (46%), Positives = 64/113 (56%)
 Frame = -1

Query: 506 MSISAAIDRTLFKDKDGGGGAAHTTIIKHRFLSFLIWQSLQSTFILFLSKTLFLSPFTKN 327
           MS+S  ++R+LFKDKDGG     +T+IKHRFL FLIWQ+LQST + FLSKTL LS FT  
Sbjct: 1   MSLSI-VERSLFKDKDGG-----STVIKHRFLGFLIWQALQSTAVFFLSKTLLLSLFTPT 54

Query: 326 PFSPNXXXXXXXXXXXXXXXXXXXXXXXXXSPHPLPFASPFEVSLSFVRLIFV 168
           PF P+                         SP P   ASP E+ L  V+LI V
Sbjct: 55  PFKPSLLSLFAFIVFHFSLLIFSTSLFIISSPRPHRAASPLELLLGSVKLILV 107


>ref|XP_004235481.1| PREDICTED: uncharacterized protein LOC101265714 [Solanum
           lycopersicum]
          Length = 558

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 46/107 (42%), Positives = 57/107 (53%)
 Frame = -1

Query: 488 IDRTLFKDKDGGGGAAHTTIIKHRFLSFLIWQSLQSTFILFLSKTLFLSPFTKNPFSPNX 309
           ++R+LF+D DGG     T ++KHRFL FLIWQ+LQST + FLSKTL LS FT+ PF P+ 
Sbjct: 6   VERSLFRDNDGG-----TKVVKHRFLGFLIWQALQSTAVFFLSKTLLLSLFTRTPFKPSF 60

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXSPHPLPFASPFEVSLSFVRLIFV 168
                                   SP P   ASP  + L   RLI V
Sbjct: 61  LSIFTFIVFHFSLLIFSTSLFIISSPRPQRAASPLNLLLGTARLILV 107


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