BLASTX nr result

ID: Rehmannia26_contig00013621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00013621
         (378 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS68779.1| hypothetical protein M569_05989, partial [Genlise...    77   3e-12
ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II tra...    71   1e-10
gb|EMJ10659.1| hypothetical protein PRUPE_ppa009816mg [Prunus pe...    69   8e-10
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra...    68   1e-09
ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II tra...    65   1e-08
ref|XP_006432823.1| hypothetical protein CICLE_v10001056mg [Citr...    65   1e-08
ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II tra...    65   1e-08
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like...    64   3e-08
emb|CBI29242.3| unnamed protein product [Vitis vinifera]               64   3e-08
gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus...    63   5e-08
ref|XP_006587646.1| PREDICTED: mediator of RNA polymerase II tra...    62   8e-08
ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II tra...    62   8e-08
ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [A...    62   8e-08
ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II tra...    62   8e-08
ref|XP_002304389.1| DNA helicase family protein [Populus trichoc...    62   1e-07
gb|EOY25442.1| RECQ helicase L2 isoform 3, partial [Theobroma ca...    61   1e-07
gb|EOY25441.1| RECQ helicase L2 isoform 2 [Theobroma cacao]            61   1e-07
gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]            61   1e-07
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun...    59   5e-07
ref|XP_002467395.1| hypothetical protein SORBIDRAFT_01g027020 [S...    59   9e-07

>gb|EPS68779.1| hypothetical protein M569_05989, partial [Genlisea aurea]
          Length = 487

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/52 (76%), Positives = 43/52 (82%)
 Frame = +2

Query: 221 EEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSRSHG 376
           EEI  ELLGVEMEL+++QEQIK LLDQQE LY RQ ELKALLE  ESSRS G
Sbjct: 5   EEISAELLGVEMELKEIQEQIKTLLDQQEILYGRQCELKALLEQNESSRSRG 56


>ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           34-like [Solanum tuberosum]
          Length = 706

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = +2

Query: 218 TEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSRSHG 376
           TEE+L EL+ VE+ELQDVQ+QIK LLD+QEKL+ERQ ELKAL+E  ESS   G
Sbjct: 4   TEELLEELVNVEVELQDVQDQIKYLLDRQEKLHERQFELKALVESCESSSGPG 56


>gb|EMJ10659.1| hypothetical protein PRUPE_ppa009816mg [Prunus persica]
          Length = 276

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 36/47 (76%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
 Frame = +2

Query: 212 MGTEEILTE-LLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLE 349
           M TEEIL E LL VE+E+Q VQ+QIK+LLDQQE+LYERQSELKA+LE
Sbjct: 1   METEEILAEELLNVEVEIQGVQDQIKILLDQQERLYERQSELKAILE 47


>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           34-like [Solanum lycopersicum]
          Length = 708

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = +2

Query: 218 TEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESS 364
           TEE+L EL+ VE+EL DVQ+QIK LLD+QEKL+ERQ ELKAL+E  ESS
Sbjct: 4   TEELLEELINVEVELLDVQDQIKYLLDRQEKLHERQFELKALVESCESS 52


>ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           34-like isoform X1 [Citrus sinensis]
          Length = 715

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +2

Query: 212 MGTEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSR 367
           M TEEIL EL  VE E++ VQEQIK L+D+Q++LYERQSELK+LLE  E+SR
Sbjct: 1   METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASR 52


>ref|XP_006432823.1| hypothetical protein CICLE_v10001056mg [Citrus clementina]
           gi|557534945|gb|ESR46063.1| hypothetical protein
           CICLE_v10001056mg [Citrus clementina]
          Length = 468

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +2

Query: 212 MGTEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSR 367
           M TEEIL EL  VE E++ VQEQIK L+D+Q++LYERQSELK+LLE  E+SR
Sbjct: 1   METEEILQELENVEAEVRLVQEQIKQLVDRQDQLYERQSELKSLLEAFEASR 52


>ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           34-like [Fragaria vesca subsp. vesca]
          Length = 708

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = +2

Query: 236 ELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSRS 370
           ELL VE+E+Q VQEQIKVLLDQQE+LYERQSEL+ALL+  + S S
Sbjct: 13  ELLNVEVEIQTVQEQIKVLLDQQERLYERQSELQALLQASKDSGS 57


>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
           vinifera]
          Length = 711

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +2

Query: 224 EILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSRS 370
           ++L EL  VE+ELQDVQ+QIK LLD+QEKL+ERQSELK LLE  + S S
Sbjct: 6   DLLEELFNVELELQDVQDQIKNLLDRQEKLHERQSELKTLLEACKGSGS 54


>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +2

Query: 224 EILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSRS 370
           ++L EL  VE+ELQDVQ+QIK LLD+QEKL+ERQSELK LLE  + S S
Sbjct: 6   DLLEELFNVELELQDVQDQIKNLLDRQEKLHERQSELKTLLEACKGSGS 54


>gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
          Length = 702

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/46 (65%), Positives = 39/46 (84%)
 Frame = +2

Query: 212 MGTEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLE 349
           M + EIL ELL VE+E+QDVQEQI+ L+++QE LYER+SEL A+LE
Sbjct: 1   MESNEILEELLNVEVEIQDVQEQIRALIERQENLYERKSELSAILE 46


>ref|XP_006587646.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           34-like isoform X3 [Glycine max]
          Length = 546

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/46 (63%), Positives = 38/46 (82%)
 Frame = +2

Query: 212 MGTEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLE 349
           M   EIL ELL +E+E+QDVQEQI+ L+++QE LYER+SEL A+LE
Sbjct: 1   MENNEILEELLNIEVEIQDVQEQIRALIERQESLYERKSELSAILE 46


>ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           34-like isoform X2 [Glycine max]
          Length = 690

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/46 (63%), Positives = 38/46 (82%)
 Frame = +2

Query: 212 MGTEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLE 349
           M   EIL ELL +E+E+QDVQEQI+ L+++QE LYER+SEL A+LE
Sbjct: 1   MENNEILEELLNIEVEIQDVQEQIRALIERQESLYERKSELSAILE 46


>ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [Amborella trichopoda]
           gi|548857895|gb|ERN15693.1| hypothetical protein
           AMTR_s00048p00224070 [Amborella trichopoda]
          Length = 713

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/50 (62%), Positives = 41/50 (82%)
 Frame = +2

Query: 221 EEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSRS 370
           ++IL ELL VE EL++VQ QI+VL+ +Q+KLYE+QSELKALLE  + S S
Sbjct: 3   DDILAELLNVEEELEEVQGQIRVLISRQDKLYEKQSELKALLEACQGSES 52


>ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           34-like isoform X1 [Glycine max]
          Length = 695

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/46 (63%), Positives = 38/46 (82%)
 Frame = +2

Query: 212 MGTEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLE 349
           M   EIL ELL +E+E+QDVQEQI+ L+++QE LYER+SEL A+LE
Sbjct: 1   MENNEILEELLNIEVEIQDVQEQIRALIERQESLYERKSELSAILE 46


>ref|XP_002304389.1| DNA helicase family protein [Populus trichocarpa]
           gi|222841821|gb|EEE79368.1| DNA helicase family protein
           [Populus trichocarpa]
          Length = 718

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/52 (61%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
 Frame = +2

Query: 212 MGTE-EILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESS 364
           M TE ++L ELL +E E++DVQ+QIK+LL++QEKL+ERQSELK LLE  ++S
Sbjct: 1   METEADVLEELLNIETEIEDVQDQIKLLLERQEKLHERQSELKFLLEAYKAS 52


>gb|EOY25442.1| RECQ helicase L2 isoform 3, partial [Theobroma cacao]
          Length = 570

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/46 (67%), Positives = 37/46 (80%)
 Frame = +2

Query: 212 MGTEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLE 349
           M  EEI  EL  VE+E+QDV++QI  LL++QEKLYERQSEL ALLE
Sbjct: 1   MEAEEIAEELQDVEVEIQDVEDQISALLERQEKLYERQSELTALLE 46


>gb|EOY25441.1| RECQ helicase L2 isoform 2 [Theobroma cacao]
          Length = 668

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/46 (67%), Positives = 37/46 (80%)
 Frame = +2

Query: 212 MGTEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLE 349
           M  EEI  EL  VE+E+QDV++QI  LL++QEKLYERQSEL ALLE
Sbjct: 1   MEAEEIAEELQDVEVEIQDVEDQISALLERQEKLYERQSELTALLE 46


>gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]
          Length = 709

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/46 (67%), Positives = 37/46 (80%)
 Frame = +2

Query: 212 MGTEEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLE 349
           M  EEI  EL  VE+E+QDV++QI  LL++QEKLYERQSEL ALLE
Sbjct: 1   MEAEEIAEELQDVEVEIQDVEDQISALLERQEKLYERQSELTALLE 46


>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
           gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
           [Ricinus communis]
          Length = 714

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 3/56 (5%)
 Frame = +2

Query: 218 TEE---ILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSRSHG 376
           TEE   +L EL  VE E+QDVQE+I+VLL++QEKL ER+SELKA+LE   SS   G
Sbjct: 6   TEEEILLLQELENVEAEIQDVQEEIQVLLERQEKLNERKSELKAILETCSSSTRRG 61


>ref|XP_002467395.1| hypothetical protein SORBIDRAFT_01g027020 [Sorghum bicolor]
           gi|241921249|gb|EER94393.1| hypothetical protein
           SORBIDRAFT_01g027020 [Sorghum bicolor]
          Length = 646

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +2

Query: 221 EEILTELLGVEMELQDVQEQIKVLLDQQEKLYERQSELKALLEHKESSRS 370
           E    ELL VE EL D+Q QIK LLD+QE+LYERQS+LKALLE  + SR+
Sbjct: 5   ENFEEELLLVESELDDIQGQIKRLLDRQEELYERQSQLKALLEVSKVSRN 54


Top