BLASTX nr result

ID: Rehmannia26_contig00013290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00013290
         (306 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006364924.1| PREDICTED: micronuclear linker histone polyp...    70   3e-10
ref|XP_004245024.1| PREDICTED: uncharacterized protein LOC101258...    59   7e-07

>ref|XP_006364924.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X1
           [Solanum tuberosum] gi|565398738|ref|XP_006364925.1|
           PREDICTED: micronuclear linker histone polyprotein-like
           isoform X2 [Solanum tuberosum]
          Length = 474

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
 Frame = +2

Query: 5   KGIRKSKNGK-PLGPGQSALTS--GLSKVKDGKEAPKSSAASNGTIASESLSGKTRT--- 166
           K  R+SKN K P  PG+   T+  G+ K KDGK+A   S  SNG++AS+  S +  +   
Sbjct: 90  KESRESKNSKQPKAPGKGKNTASIGVKKTKDGKDASAGSVVSNGSLASQQRSKQASSLGV 149

Query: 167 KSKSFNEKQAADNSEVTSVQN-NQNIPKQRGQPDATSSS 280
           KSKSFN+++ ADN+   +V   N +  KQ GQPDATS S
Sbjct: 150 KSKSFNDRKTADNNLKPAVARINASHAKQSGQPDATSPS 188


>ref|XP_004245024.1| PREDICTED: uncharacterized protein LOC101258086 [Solanum
           lycopersicum]
          Length = 460

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
 Frame = +2

Query: 14  RKSKNGKPLGPGQSALTSGLSKVKDGKEAPKSSAASNGTIASESLSGKTRT---KSKSFN 184
           + SK  K  G G++ ++ G+ K KD   A   S   NG++AS+  S +T +   KSKSFN
Sbjct: 96  KNSKQSKAPGKGKNTVSIGVKKTKD---ASTGSVVLNGSLASQQRSKQTSSLGVKSKSFN 152

Query: 185 EKQAADNSEVTSVQN-NQNIPKQRGQPDATSSS 280
           +++ ADN+    V   N +  KQ GQPDATS S
Sbjct: 153 DRKTADNNLKPPVARINVSHAKQSGQPDATSPS 185


Top