BLASTX nr result
ID: Rehmannia26_contig00013028
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00013028
(509 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY16926.1| RNA-binding family protein isoform 1 [Theobroma c... 73 6e-16
gb|EOY16927.1| RNA-binding family protein isoform 2, partial [Th... 73 4e-11
ref|XP_002510776.1| RNA-binding region-containing protein, putat... 73 4e-11
ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vin... 67 3e-09
emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera] 67 3e-09
ref|XP_002319865.1| hypothetical protein POPTR_0013s09120g [Popu... 66 5e-09
ref|XP_002337594.1| predicted protein [Populus trichocarpa] 66 5e-09
ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isofo... 64 3e-08
ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isofo... 64 3e-08
ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citr... 64 3e-08
ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citr... 64 3e-08
ref|XP_003605647.1| RNA-binding protein [Medicago truncatula] gi... 60 3e-07
ref|XP_003605646.1| RNA-binding protein [Medicago truncatula] gi... 60 3e-07
ref|XP_006371379.1| hypothetical protein POPTR_0019s09640g [Popu... 60 4e-07
ref|XP_004250743.1| PREDICTED: uncharacterized protein LOC101249... 56 6e-06
ref|XP_004250742.1| PREDICTED: uncharacterized protein LOC101249... 56 6e-06
ref|XP_006352101.1| PREDICTED: RNA-binding protein 24-A-like iso... 55 1e-05
ref|XP_006352100.1| PREDICTED: RNA-binding protein 24-A-like iso... 55 1e-05
>gb|EOY16926.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 344
Score = 72.8 bits (177), Expect(2) = 6e-16
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGIYP 188
+YPYL F + GTGGATGY++ QGYGV YPHH FQYSA+NSTG YP
Sbjct: 194 FYPYLQFGE--GTGGATGYTSGQGYGVQYPHHPFQYSAVNSTGS-YP 237
Score = 36.6 bits (83), Expect(2) = 6e-16
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 12/64 (18%)
Frame = +1
Query: 292 STFGLTMVIFLFFSLSLSRPMPVAFGHIHT-------WKSPPKGSPH-----CFSL*ERF 435
STFGLTMV+FL SLS S+P+ T KSPPK H C + F
Sbjct: 267 STFGLTMVLFLPLSLSNSKPVLGIRAFARTNKVPHRGHKSPPKLENHACFFCCIFFKQGF 326
Query: 436 LQEN 447
L+EN
Sbjct: 327 LEEN 330
>gb|EOY16927.1| RNA-binding family protein isoform 2, partial [Theobroma cacao]
Length = 261
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGIYP 188
+YPYL F + GTGGATGY++ QGYGV YPHH FQYSA+NSTG YP
Sbjct: 194 FYPYLQFGE--GTGGATGYTSGQGYGVQYPHHPFQYSAVNSTGS-YP 237
>ref|XP_002510776.1| RNA-binding region-containing protein, putative [Ricinus communis]
gi|223551477|gb|EEF52963.1| RNA-binding
region-containing protein, putative [Ricinus communis]
Length = 259
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +3
Query: 18 SGXXXXXXXXYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGIYP 188
SG +YPYL F + G+GGAT YS+SQ Y V YPHHLFQYSA+NSTGG YP
Sbjct: 181 SGMMSGAAAAFYPYLQFGE--GSGGATSYSSSQNYNVQYPHHLFQYSAVNSTGG-YP 234
>ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vinifera]
gi|297734754|emb|CBI16988.3| unnamed protein product
[Vitis vinifera]
Length = 264
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/50 (66%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT---GYSASQGYGVHYPHHLFQYSAINSTGGIYP 188
+YPYL F + G+GGA GY++ QGYGV YPHHL QYSAINSTGG YP
Sbjct: 193 FYPYLQFGE--GSGGAAASGGYTSGQGYGVQYPHHLVQYSAINSTGG-YP 239
>emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]
Length = 269
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/50 (66%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT---GYSASQGYGVHYPHHLFQYSAINSTGGIYP 188
+YPYL F + G+GGA GY++ QGYGV YPHHL QYSAINSTGG YP
Sbjct: 193 FYPYLQFGE--GSGGAAASGGYTSGQGYGVQYPHHLVQYSAINSTGG-YP 239
>ref|XP_002319865.1| hypothetical protein POPTR_0013s09120g [Populus trichocarpa]
gi|222858241|gb|EEE95788.1| hypothetical protein
POPTR_0013s09120g [Populus trichocarpa]
Length = 266
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYS--ASQGYGVHYPHHLFQYSAINSTGGIYP 188
+YPYL F + TGGAT YS + Q YGV YPHHLFQYS+INST G YP
Sbjct: 194 FYPYLQFGEGS-TGGATSYSNTSGQSYGVQYPHHLFQYSSINSTTGGYP 241
>ref|XP_002337594.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYS--ASQGYGVHYPHHLFQYSAINSTGGIYP 188
+YPYL F + TGGAT YS + Q YGV YPHHLFQYS+INST G YP
Sbjct: 93 FYPYLQFGEGS-TGGATSYSNTSGQSYGVQYPHHLFQYSSINSTTGGYP 140
>ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isoform X4 [Citrus sinensis]
Length = 279
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYP 188
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP
Sbjct: 210 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YP 254
>ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Citrus sinensis]
gi|568849099|ref|XP_006478307.1| PREDICTED: RNA-binding
protein 24-like isoform X2 [Citrus sinensis]
Length = 286
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYP 188
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP
Sbjct: 210 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YP 254
>ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
gi|568849105|ref|XP_006478310.1| PREDICTED: RNA-binding
protein 24-like isoform X5 [Citrus sinensis]
gi|557544074|gb|ESR55052.1| hypothetical protein
CICLE_v10021520mg [Citrus clementina]
Length = 278
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYP 188
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP
Sbjct: 209 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YP 253
>ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
gi|568849101|ref|XP_006478308.1| PREDICTED: RNA-binding
protein 24-like isoform X3 [Citrus sinensis]
gi|557544073|gb|ESR55051.1| hypothetical protein
CICLE_v10021520mg [Citrus clementina]
Length = 285
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYP 188
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP
Sbjct: 209 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YP 253
>ref|XP_003605647.1| RNA-binding protein [Medicago truncatula]
gi|355506702|gb|AES87844.1| RNA-binding protein
[Medicago truncatula]
Length = 267
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT--GYSASQGYGVHYPHHLFQYSAINSTGG 179
YYPYL + + GTGGAT GY++ QGYGV+YP +FQYS I STGG
Sbjct: 196 YYPYLQYGE--GTGGATTGGYTSGQGYGVNYPPQVFQYSPIASTGG 239
>ref|XP_003605646.1| RNA-binding protein [Medicago truncatula]
gi|355506701|gb|AES87843.1| RNA-binding protein
[Medicago truncatula]
Length = 272
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT--GYSASQGYGVHYPHHLFQYSAINSTGG 179
YYPYL + + GTGGAT GY++ QGYGV+YP +FQYS I STGG
Sbjct: 196 YYPYLQYGE--GTGGATTGGYTSGQGYGVNYPPQVFQYSPIASTGG 239
>ref|XP_006371379.1| hypothetical protein POPTR_0019s09640g [Populus trichocarpa]
gi|550317135|gb|ERP49176.1| hypothetical protein
POPTR_0019s09640g [Populus trichocarpa]
Length = 271
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYSAS-QGYGVHYPHHLFQYSAINSTGGIYP 188
+YPYL F + G G AT Y S Q YGV YP++LFQYSAINST G YP
Sbjct: 194 FYPYLQFGEGSG-GAATSYPTSGQSYGVQYPYNLFQYSAINSTTGGYP 240
>ref|XP_004250743.1| PREDICTED: uncharacterized protein LOC101249883 isoform 2 [Solanum
lycopersicum]
Length = 261
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +3
Query: 3 SNGLVSGXXXXXXXXYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGG 179
S SG +YPY+NF + G G Y+ SQGYGV YPHHLF YSA + G
Sbjct: 176 SAATASGVLSSAAAAFYPYMNFGEGNGNGC---YTPSQGYGVQYPHHLFPYSAAAAAAG 231
>ref|XP_004250742.1| PREDICTED: uncharacterized protein LOC101249883 isoform 1 [Solanum
lycopersicum]
Length = 266
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +3
Query: 3 SNGLVSGXXXXXXXXYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGG 179
S SG +YPY+NF + G G Y+ SQGYGV YPHHLF YSA + G
Sbjct: 176 SAATASGVLSSAAAAFYPYMNFGEGNGNGC---YTPSQGYGVQYPHHLFPYSAAAAAAG 231
>ref|XP_006352101.1| PREDICTED: RNA-binding protein 24-A-like isoform X2 [Solanum
tuberosum]
Length = 259
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/62 (46%), Positives = 34/62 (54%)
Frame = +3
Query: 3 SNGLVSGXXXXXXXXYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGI 182
S SG +YPY+NF + G G Y+ SQGYGV YPHHLF YSA + G
Sbjct: 176 SAATASGVLSSAAAAFYPYMNFGEGNGNGC---YTPSQGYGVQYPHHLFPYSAA-AAGPG 231
Query: 183 YP 188
YP
Sbjct: 232 YP 233
>ref|XP_006352100.1| PREDICTED: RNA-binding protein 24-A-like isoform X1 [Solanum
tuberosum]
Length = 264
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/62 (46%), Positives = 34/62 (54%)
Frame = +3
Query: 3 SNGLVSGXXXXXXXXYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGI 182
S SG +YPY+NF + G G Y+ SQGYGV YPHHLF YSA + G
Sbjct: 176 SAATASGVLSSAAAAFYPYMNFGEGNGNGC---YTPSQGYGVQYPHHLFPYSAA-AAGPG 231
Query: 183 YP 188
YP
Sbjct: 232 YP 233