BLASTX nr result
ID: Rehmannia26_contig00009860
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00009860
(1303 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir... 248 2e-63
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn... 234 3e-59
gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavan... 230 1e-57
gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] 225 4e-56
gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I... 222 3e-55
gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Men... 215 4e-53
gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subu... 214 5e-53
gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Men... 214 6e-53
ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyro... 204 5e-50
gb|EPS64735.1| geranyl diphosphate synthase small subunit, parti... 201 6e-49
pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate ... 201 7e-49
gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma... 200 1e-48
ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta... 200 1e-48
ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Popu... 192 2e-46
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] 191 7e-46
pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Ger... 187 8e-45
gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate syntha... 186 2e-44
ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synt... 184 7e-44
gb|EMJ15727.1| hypothetical protein PRUPE_ppa015010mg [Prunus pe... 181 5e-43
ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyro... 181 6e-43
>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
Length = 297
Score = 248 bits (633), Expect(2) = 2e-63
Identities = 127/217 (58%), Positives = 156/217 (71%), Gaps = 3/217 (1%)
Frame = +1
Query: 250 MATGISHSHLNAKTNLFP---KSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIP 420
MA G++H N K+ LFP KS T P +A + Q+Y +IE+D+E+YLKKAIP
Sbjct: 1 MAHGLTH--FNTKSGLFPSITKSKTTRPSTRPVILAMTRTQTYRATIESDIESYLKKAIP 58
Query: 421 IRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEH 600
IR+PESVFEPMHHLTFAAPRT+A ALCVAACELVGGD Y HE+
Sbjct: 59 IRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHEN 118
Query: 601 LPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITR 780
LPLTD P K + HK++PNIELLTGDGIIPFGLEL+ARSMD +NN D+ILR IIE+TR
Sbjct: 119 LPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELTR 178
Query: 781 ATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
GS+G+V+GQY ELG++++ D E++EYV KKKEG
Sbjct: 179 VMGSEGIVEGQYHELGLNQL--NDLELIEYVCKKKEG 213
Score = 22.7 bits (47), Expect(2) = 2e-63
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 935 RGLLGKNNSGIMXXXXXXXXXXXXXXXXSFQGKRTELIASLVE 1063
+GLLGKN SG SF G++ ELI + E
Sbjct: 248 QGLLGKNRSG-FEGRIKELKELAVKELESFGGEKIELIRGVFE 289
>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
Chain A, Crystal Structure Of Geranyl Diphosphate
Synthase Small Subunit From Antirrhinum Majus
Length = 273
Score = 234 bits (597), Expect(2) = 3e-59
Identities = 114/183 (62%), Positives = 140/183 (76%)
Frame = +1
Query: 343 MAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELV 522
M+ + Q+Y +IE+D+E+YLKKAIPIR+PESVFEPMHHLTFAAPRT+A ALCVAACELV
Sbjct: 1 MSLTRTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELV 60
Query: 523 GGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGL 702
GGD Y HE+LPLTD P K + HK++PNIELLTGDGIIPFGL
Sbjct: 61 GGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGL 120
Query: 703 ELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKK 882
EL+ARSMD +NN D+ILR IIE+TR GS+G+V+GQY ELG++++ D E++EYV KK
Sbjct: 121 ELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQL--NDLELIEYVCKK 178
Query: 883 KEG 891
KEG
Sbjct: 179 KEG 181
Score = 23.1 bits (48), Expect(2) = 3e-59
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 935 RGLLGKNNSGIMXXXXXXXXXXXXXXXXSFQGKRTELIASL--VEPSLPAAQK*NHEY 1102
+GLLGKN SG SF G++ ELI + +E SL + +H +
Sbjct: 216 QGLLGKNRSG-FEGRIKELKELAVKELESFGGEKIELIRGVFELEHSLAGVEGHHHHH 272
>gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavandula x intermedia]
Length = 295
Score = 230 bits (586), Expect = 1e-57
Identities = 125/209 (59%), Positives = 148/209 (70%), Gaps = 2/209 (0%)
Frame = +1
Query: 271 SHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFEP 450
SHL KT F +S+ + ++AAQN SYW SI+AD+ TYLKKAIPIRSPE+VFEP
Sbjct: 6 SHLPIKTRSFFCNSS------AQPVSAAQNASYWSSIDADINTYLKKAIPIRSPETVFEP 59
Query: 451 MHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRP- 627
MHHLTFAAP TTA ALCVAACEL GG+ Y H+HLPLTDRPRP
Sbjct: 60 MHHLTFAAPTTTASALCVAACELFGGNRTQALPAASAIHLIHAAAYTHDHLPLTDRPRPE 119
Query: 628 -KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVV 804
KP + HK+NPNIELLTGDGI PFG ELLA S+D + D+ILRV+IEI+RA+GSQG+V
Sbjct: 120 SKPDIQHKFNPNIELLTGDGIAPFGFELLANSVD--TTHPDRILRVVIEISRASGSQGLV 177
Query: 805 DGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
DG Y+E I + S +E +EYVSKKK G
Sbjct: 178 DGLYREKQIVDQRSR-FEFIEYVSKKKYG 205
>gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus]
Length = 299
Score = 225 bits (573), Expect = 4e-56
Identities = 116/217 (53%), Positives = 148/217 (68%), Gaps = 3/217 (1%)
Frame = +1
Query: 250 MATGISHSHLNAKTNLFPKSSTNLSRFTPRAM---AAAQNQSYWVSIEADVETYLKKAIP 420
MA IS +T S ++LS TP + W +IE+D++T+LKK+IP
Sbjct: 1 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIP 60
Query: 421 IRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEH 600
IR+PE VFEPMH+LTFAAPRTTAPALC+AACE+VGGD Y HE+
Sbjct: 61 IRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQAMAAAAAIHLVHAAAYAHEN 120
Query: 601 LPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITR 780
LPLTDR RPKP + HK+N NIELLTGDGI+P+G ELLA+SMD NN D+ILRVIIEIT+
Sbjct: 121 LPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEITQ 178
Query: 781 ATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
A GS+G++DGQ++EL + + + ++EYV KKKEG
Sbjct: 179 AAGSKGIIDGQFRELDVID-SEINMGLIEYVCKKKEG 214
>gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
miltiorrhiza]
Length = 314
Score = 222 bits (565), Expect = 3e-55
Identities = 116/209 (55%), Positives = 147/209 (70%), Gaps = 3/209 (1%)
Frame = +1
Query: 274 HLNAKTNLFPKSSTNLSRFTPRAMAA-AQNQSYWVSIEADVETYLKKAIPIRSPESVFEP 450
++N K++ K+ +NLSR + A AQN SYW +IEAD++TYLKK+I IRSPE+VFEP
Sbjct: 18 YVNTKSSFPFKTRSNLSRSSRACTAVVAQNHSYWAAIEADIDTYLKKSIAIRSPETVFEP 77
Query: 451 MHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRP- 627
MHHLTFAAPRT A A+CVAACELVGG+ Y HEHLPLTDRPRP
Sbjct: 78 MHHLTFAAPRTAASAICVAACELVGGERSQAIATASAIHIMHAAAYAHEHLPLTDRPRPN 137
Query: 628 -KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVV 804
KP + HKY PNIELLTGDG+ FG ELLA S+ N ++ILRVIIEI+RA+GS+G++
Sbjct: 138 SKPAIQHKYGPNIELLTGDGMASFGFELLAGSIRSDHPNPERILRVIIEISRASGSEGII 197
Query: 805 DGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
DG Y+E I + S ++ +EY+ +KK G
Sbjct: 198 DGFYREKEIVDQHSR-FDFIEYLCRKKYG 225
>gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha canadensis]
Length = 313
Score = 215 bits (547), Expect = 4e-53
Identities = 117/226 (51%), Positives = 150/226 (66%), Gaps = 16/226 (7%)
Frame = +1
Query: 262 ISHSHLNAKTNLFPKSSTNLSRFT-------------PRAMAAAQNQSYWVSIEADVETY 402
I+ SH+N+KT K+ ++LSR + P AAQ+Q YW +IEAD++ Y
Sbjct: 3 INLSHINSKTCFPLKTRSDLSRSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEADIDRY 62
Query: 403 LKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXX 582
LKK+I IR PE+VF PMHHLTFAAP T A ALC+AACELVGGD
Sbjct: 63 LKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHLVHAA 122
Query: 583 XYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQ-NNQDKI 753
Y+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA S+D A+ ++ D+I
Sbjct: 123 AYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRI 182
Query: 754 LRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
LRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK G
Sbjct: 183 LRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYG 227
>gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
gi|10637873|emb|CAC10560.1| gpp synthase small subunit
[Mentha x piperita]
Length = 313
Score = 214 bits (546), Expect = 5e-53
Identities = 117/226 (51%), Positives = 149/226 (65%), Gaps = 16/226 (7%)
Frame = +1
Query: 262 ISHSHLNAKTNLFPKSSTNLSRFT-------------PRAMAAAQNQSYWVSIEADVETY 402
I+ SH+N+KT K+ ++LSR + P AAQ+Q YW +IEAD+E Y
Sbjct: 3 INLSHINSKTCFPLKTRSDLSRSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEADIERY 62
Query: 403 LKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXX 582
LKK+I IR PE+VF PMHHLTFAAP T A LC+AACELVGGD
Sbjct: 63 LKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMAAAAAIHLVHAA 122
Query: 583 XYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQ-NNQDKI 753
Y+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA S+D A+ ++ D+I
Sbjct: 123 AYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRI 182
Query: 754 LRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
LRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK G
Sbjct: 183 LRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYG 227
>gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita]
Length = 313
Score = 214 bits (545), Expect = 6e-53
Identities = 117/226 (51%), Positives = 150/226 (66%), Gaps = 16/226 (7%)
Frame = +1
Query: 262 ISHSHLNAKTNLFPKSSTNLSRFT-------------PRAMAAAQNQSYWVSIEADVETY 402
I+ SH+N+KT K+ ++LSR + P AAQ+Q YW +IEAD++ Y
Sbjct: 3 INLSHINSKTCFPLKTRSDLSRSSSGRCMPTAAAAAFPIIATAAQSQPYWAAIEADIDRY 62
Query: 403 LKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXX 582
LKK+I IR PE+VF PMHHLTFAAP T A ALC+AACELVGGD
Sbjct: 63 LKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHLVHAA 122
Query: 583 XYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQ-NNQDKI 753
Y+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA S+D A+ ++ D+I
Sbjct: 123 AYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRI 182
Query: 754 LRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
LRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK G
Sbjct: 183 LRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYG 227
>ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Solanum lycopersicum]
Length = 269
Score = 204 bits (520), Expect = 5e-50
Identities = 103/186 (55%), Positives = 128/186 (68%), Gaps = 7/186 (3%)
Frame = +1
Query: 355 QNQSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDX 534
QNQSYW SIE+D+E +LKKAI IR+PESVFEPMH+LTF P++TAPALCVAACELVGGD
Sbjct: 3 QNQSYWASIESDIEAHLKKAISIRAPESVFEPMHYLTFTTPKSTAPALCVAACELVGGDR 62
Query: 535 XXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPKPTV-------HHKYNPNIELLTGDGIIP 693
Y H+H+ + R P P + HK+ PNIELLTGDGI+P
Sbjct: 63 DRAMAAASAIHLMHVATYTHQHMTMA-RTEPGPVIEHKDIEPEHKFGPNIELLTGDGIMP 121
Query: 694 FGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYV 873
F +EL+ ++M A+ N DKI+ VIIE+TRA GSQG ++GQY+EL + G+ D E EYV
Sbjct: 122 FAIELIVKAMSPARKNSDKIVSVIIEVTRAFGSQGQLEGQYRELEWAQSGNEDEETFEYV 181
Query: 874 SKKKEG 891
KKKEG
Sbjct: 182 CKKKEG 187
>gb|EPS64735.1| geranyl diphosphate synthase small subunit, partial [Genlisea
aurea]
Length = 211
Score = 201 bits (511), Expect = 6e-49
Identities = 101/177 (57%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
Frame = +1
Query: 364 SYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXX 543
SYW I+ DV+ YLK+AIP PE+V+EPM HLTFAAP TTA +LCVAACELVGGD
Sbjct: 1 SYWEGIQCDVQLYLKEAIPRGPPEAVYEPMRHLTFAAPTTTASSLCVAACELVGGDRKQA 60
Query: 544 XXXXXXXXXXXXXXYIHEHLPLTD-RPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARS 720
Y HEHLPLT+ P + + H+Y PNIELLTGDG+IPFG+EL+A+S
Sbjct: 61 IAAAAALHLMHAALYAHEHLPLTEGHPPSRRPIEHRYGPNIELLTGDGLIPFGVELVAQS 120
Query: 721 MDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
MD + NN D+IL+VIIEITRATGSQG+VDG Y+ ++ +D +EYV KK EG
Sbjct: 121 MDPSSNNHDRILKVIIEITRATGSQGMVDGLYRRKNLELHSDSDITELEYVCKKIEG 177
>pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium gi|289526779|pdb|3KRA|C Chain C,
Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium gi|289526782|pdb|3KRC|B Chain B,
Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp gi|289526783|pdb|3KRC|C Chain C, Mint
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp gi|289526786|pdb|3KRF|B Chain B, Mint
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (i)
gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With
Magnesium, Ipp, And Dmaspp (i) gi|289526790|pdb|3KRO|B
Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
Synthase In Complex With Magnesium, Ipp, And Dmaspp (ii)
gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With
Magnesium, Ipp, And Dmaspp (ii) gi|289526794|pdb|3KRP|B
Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
Synthase In Complex With Magnesium And Gpp
gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With Magnesium
And Gpp
Length = 274
Score = 201 bits (510), Expect = 7e-49
Identities = 103/180 (57%), Positives = 127/180 (70%), Gaps = 3/180 (1%)
Frame = +1
Query: 361 QSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXX 540
Q YW +IEAD+E YLKK+I IR PE+VF PMHHLTFAAP T A LC+AACELVGGD
Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQ 61
Query: 541 XXXXXXXXXXXXXXXYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLA 714
Y+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA
Sbjct: 62 AMAAAAAIHLVHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLA 121
Query: 715 RSMDLAQ-NNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
S+D A+ ++ D+ILRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK G
Sbjct: 122 GSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYG 180
>gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma cacao]
Length = 300
Score = 200 bits (508), Expect = 1e-48
Identities = 103/210 (49%), Positives = 132/210 (62%), Gaps = 3/210 (1%)
Frame = +1
Query: 271 SHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFEP 450
SH+N L N + P + + NQSYW SI AD+E +LK+AIP+R P SV +P
Sbjct: 6 SHINGNPLLQVPCRPNPMPYKPMMVTMSCNQSYWASINADIEAHLKQAIPVREPLSVSQP 65
Query: 451 MHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPK 630
MHHLTFA P+ TAPALCVAACELVGG + HE LPLT RP+
Sbjct: 66 MHHLTFACPKNTAPALCVAACELVGGHRDQALPAASALHLMYAASFTHEQLPLTQSSRPR 125
Query: 631 PTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDG 810
T+ H Y PNIELL GD +IP GLELLARS D A + +++LRV++EITRATGSQG++ G
Sbjct: 126 STIQHAYGPNIELLIGDAMIPSGLELLARSDDPAHTDSERVLRVMVEITRATGSQGMIHG 185
Query: 811 QYQELGIDEIGSTDYEI---VEYVSKKKEG 891
QY E+ + G+ + +E +S+K EG
Sbjct: 186 QYYEVERCQSGNKEASYMVEIERISEKYEG 215
>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223527725|gb|EEF29831.1| geranyl geranyl
pyrophosphate synthase, putative [Ricinus communis]
Length = 308
Score = 200 bits (508), Expect = 1e-48
Identities = 105/197 (53%), Positives = 133/197 (67%), Gaps = 9/197 (4%)
Frame = +1
Query: 328 FTPRAMAAAQNQS----YWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPA 495
F+ R +A + S YW I AD+ET+LK+AIP+R P VFEPMHHLTFAAPR+ APA
Sbjct: 31 FSRRPVACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPA 90
Query: 496 LCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRP--KPTVHHKYNPNIEL 669
LC+AACELVGG + HE++PLTDRPRP +P HH + PNIEL
Sbjct: 91 LCIAACELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIEL 150
Query: 670 LTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDE-IGS 846
LTGDG+IPF ELLA+ + AQ+N D+ILRV+IEI+RA GSQG+V+GQY E D+ +G
Sbjct: 151 LTGDGMIPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGD 210
Query: 847 TDYEI--VEYVSKKKEG 891
+ + + V KKKEG
Sbjct: 211 ELFHVAWLRDVCKKKEG 227
>ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa]
gi|550321901|gb|EEF06199.2| hypothetical protein
POPTR_0015s04050g [Populus trichocarpa]
Length = 312
Score = 192 bits (489), Expect = 2e-46
Identities = 104/206 (50%), Positives = 133/206 (64%), Gaps = 9/206 (4%)
Frame = +1
Query: 301 PKSSTNLSRFTPRAMAAA---------QNQSYWVSIEADVETYLKKAIPIRSPESVFEPM 453
P+S+TN + R M A N+SYW S+ +++ +LK+AIPIR P SVFEPM
Sbjct: 21 PRSNTNRPLLSHRPMTVAVTATSNGTTYNKSYWTSVNDEIDAHLKQAIPIRPPLSVFEPM 80
Query: 454 HHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPKP 633
HHLTFAAPRTTAPALC+AACELVGG+ HEH+ T +
Sbjct: 81 HHLTFAAPRTTAPALCIAACELVGGNRDQAMAAASALRLMHAAALTHEHILSTGN---RA 137
Query: 634 TVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQ 813
+ H + NIELLTGDG++PFGLELLA+S DL QNN ++ILRVIIEIT+A GSQG+ GQ
Sbjct: 138 RIGHSFGSNIELLTGDGMVPFGLELLAKSDDLTQNNSERILRVIIEITQAMGSQGMALGQ 197
Query: 814 YQELGIDEIGSTDYEIVEYVSKKKEG 891
Y + + G +DY +++V KKKEG
Sbjct: 198 YNQF---QHGQSDY--IDHVCKKKEG 218
>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 191 bits (484), Expect = 7e-46
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 4/212 (1%)
Frame = +1
Query: 268 HSHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFE 447
H +L A+ L P +A + +QSYW S+ AD++T+LK+AIPIR P +VFE
Sbjct: 10 HGNLIARAVSSSNPKHPLFSHRPMVVAMSTDQSYWSSVNADLDTHLKQAIPIRQPLAVFE 69
Query: 448 PMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRP 627
PM HL +AP+T+APALC+AACELVGG HE+LPLTDRPRP
Sbjct: 70 PMRHLILSAPQTSAPALCIAACELVGGHRNQAMAAASALRLVHASASTHENLPLTDRPRP 129
Query: 628 KP-TVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVV 804
P T Y PNIELL DGIIP+G ELLAR D A+NN +++LR IIEI+RA GSQGV+
Sbjct: 130 MPRTRPTLYGPNIELLIADGIIPYGFELLARDDDAAENNSNRVLRAIIEISRAMGSQGVI 189
Query: 805 DGQYQELGIDEI-GSTDYEI--VEYVSKKKEG 891
+GQY E +E G + + ++ V +KKEG
Sbjct: 190 EGQYNESQYEESEGEEIFHVGWLQNVCRKKEG 221
>pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ligands gi|310942868|pdb|3OAC|B Chain B,
Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ligands
Length = 264
Score = 187 bits (475), Expect = 8e-45
Identities = 97/178 (54%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
Frame = +1
Query: 361 QSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXX 540
Q YW +IEAD+E YLKK+I IR PE+VF PMHHLTFAAP T A LC+AACELVGGD
Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQ 61
Query: 541 XXXXXXXXXXXXXXXYIHEHLPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARS 720
Y+HEHLP P + HKY PN+ELLTGDGI+PFG ELLA S
Sbjct: 62 AMAAAAAIHLVHAAAYVHEHLP--------PAIQHKYGPNVELLTGDGIVPFGFELLAGS 113
Query: 721 MDLAQ-NNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 891
+D A+ ++ D+ILRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK G
Sbjct: 114 VDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYG 170
>gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit
[Morus notabilis]
Length = 306
Score = 186 bits (472), Expect = 2e-44
Identities = 96/194 (49%), Positives = 126/194 (64%), Gaps = 8/194 (4%)
Frame = +1
Query: 334 PRAMAAAQNQS-YWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAA 510
PR M +Q+QS Y SI AD+E +LK+AIP++SP SV+ PMHH+TF+AP APALCVAA
Sbjct: 33 PRKMTTSQDQSSYRASITADIEAHLKQAIPLKSPLSVYAPMHHMTFSAPPNPAPALCVAA 92
Query: 511 CELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPKP----TVHHKYNPNIELLTG 678
CELVGGD + HEHLPLTDRP+PKP TV H +NPNIELL
Sbjct: 93 CELVGGDRSKAMAAASALHLMHAASFTHEHLPLTDRPKPKPKPKPTVDHPFNPNIELLIP 152
Query: 679 DGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYE 858
D ++PF EL A S D Q+ ++LRVI+E+ R GSQG+VD QY+E+ + + +
Sbjct: 153 DAMVPFAYELSAVSDDPTQDTSGRVLRVIVELARVMGSQGIVDAQYREVLVSPLDGRELN 212
Query: 859 IVEYVS---KKKEG 891
+E+V ++KEG
Sbjct: 213 DIEWVDDMCRRKEG 226
>ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic [Vitis vinifera]
Length = 298
Score = 184 bits (467), Expect = 7e-44
Identities = 99/200 (49%), Positives = 126/200 (63%), Gaps = 4/200 (2%)
Frame = +1
Query: 250 MATGISHSHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRS 429
MAT +H + + +S+ P + AQ SYW SI D++ +L++ I IR
Sbjct: 1 MATAFTHINGQNFISTLHRSNHRRPSGGPIRVTMAQKSSYWTSINDDIDAHLRRVIAIRE 60
Query: 430 PESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPL 609
P SVF+PMHHLTFAAP TTAPALC+AACELVGG Y HEH+PL
Sbjct: 61 PFSVFKPMHHLTFAAPETTAPALCIAACELVGGRRELAIAAASALHLMHAASYFHEHIPL 120
Query: 610 TDRPRPK--PTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQ--DKILRVIIEIT 777
TD+PR P + PNIELLTGDG+IPFGLELLA+S +L +++ D+IL+VIIE+T
Sbjct: 121 TDQPRANSPPRPGPTFGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELT 180
Query: 778 RATGSQGVVDGQYQELGIDE 837
R GSQGVV+GQY + DE
Sbjct: 181 RTIGSQGVVNGQYIQAQCDE 200
>gb|EMJ15727.1| hypothetical protein PRUPE_ppa015010mg [Prunus persica]
Length = 296
Score = 181 bits (460), Expect = 5e-43
Identities = 104/200 (52%), Positives = 129/200 (64%), Gaps = 5/200 (2%)
Frame = +1
Query: 307 SSTNLSRFTPRAMAA-AQNQSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRT 483
S +N SR + MA +Q+ YW S+ A++E +LK+ I +R P SVFEPMHHL F+AP +
Sbjct: 19 SRSNPSRPSRTTMAIMSQDHPYWASVHAEIEVHLKQHILVRPPLSVFEPMHHLVFSAPPS 78
Query: 484 TAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDR----PRPKPTVHHKY 651
PALCVAACELVGG IHE L TDR P+P+P VH
Sbjct: 79 PGPALCVAACELVGGHRDQAIAAAAALHLMHAAAVIHEQLLSTDRLKTKPKPRPMVH--- 135
Query: 652 NPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGI 831
+P IELLTGDG+ FG ELLA+SMD AQNN D+ILRVI+E+TRA GSQG+VDGQY E+ +
Sbjct: 136 SPGIELLTGDGMFAFGYELLAKSMDPAQNNSDRILRVIVEMTRAMGSQGMVDGQYHEILM 195
Query: 832 DEIGSTDYEIVEYVSKKKEG 891
S Y +YV +KKEG
Sbjct: 196 LCKQSRHY---KYVCEKKEG 212
>ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cicer arietinum]
Length = 302
Score = 181 bits (459), Expect = 6e-43
Identities = 92/178 (51%), Positives = 116/178 (65%), Gaps = 3/178 (1%)
Frame = +1
Query: 367 YWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXX 546
YW S++AD+E +LK++I I+ P VFEPMHHL F AP+TT PALC+AACELVGG
Sbjct: 50 YWASLQADIEAHLKQSITIKEPLVVFEPMHHLVFNAPKTTVPALCLAACELVGGQRNQAI 109
Query: 547 XXXXXXXXXXXXXYIHEHLPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMD 726
Y HEHL L+DRP+PKP + H Y PN+ELLTGDGI+PFG ELLARS
Sbjct: 110 SAASALLLMEAATYTHEHLLLSDRPKPKPVITHAYGPNVELLTGDGIVPFGFELLARSN- 168
Query: 727 LAQNNQDKILRVIIEITRATGSQGVVDGQYQ---ELGIDEIGSTDYEIVEYVSKKKEG 891
N ++ILRV++EI+RA GS GV+D QY+ + G D E + V +K EG
Sbjct: 169 -GGENSERILRVMVEISRAVGSGGVIDAQYRKTMDSGSDGDEMCHVEGIRRVVEKYEG 225