BLASTX nr result
ID: Rehmannia26_contig00008458
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia26_contig00008458 (1505 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 161 1e-40 ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A... 164 9e-38 ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A... 147 9e-33 ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A... 141 1e-32 gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [... 144 1e-31 gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 127 1e-26 ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago... 115 6e-23 ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314... 112 3e-22 ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A... 110 1e-21 ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A... 110 2e-21 ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica... 107 1e-20 gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis] 106 3e-20 ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondr... 106 3e-20 ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein A... 105 7e-20 gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris] 102 6e-19 ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein A... 101 1e-18 gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao] 99 4e-18 gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theob... 98 8e-18 gb|EOY34748.1| Uncharacterized protein TCM_042328 [Theobroma cacao] 97 1e-17 gb|EOY02236.1| Uncharacterized protein TCM_011923 [Theobroma cacao] 96 1e-17 >ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 872 Score = 161 bits (407), Expect(2) = 1e-40 Identities = 122/415 (29%), Positives = 182/415 (43%), Gaps = 11/415 (2%) Frame = +3 Query: 291 FWIDNWLGYCIAARIGIPHEYI*LFGQH---------ISEYFYEKSWHFTFLFVEAYLDL 443 FW DN+LG I FG H +S+Y SW L + Sbjct: 431 FWRDNFLG----------RPLIEFFGNHGALNDNSSLVSDYIDNGSWVLPPLLQLNLSAV 480 Query: 444 VRDIVRFPIA--HSSKDTRVWMHSDDGNITSKAAYSHIHPTSPMVHCGS*IWSPHIPERC 617 I + PI+ S +D +W S G +T+K A+ + SP+V G +WS I R Sbjct: 481 CNLICQVPISINPSMEDKLIWQASSTGELTAKQAFLFLQQASPVVPWGKPLWSKFILPRM 540 Query: 618 LIVV*RAIYNRLAVLDLLHPRGFIGPSVCGLCCAYVESVDHLFVSFIFAGALWCWIFSLF 797 + + + + LL RG S C C ES+DH+F+ FA ++W +F Sbjct: 541 SLHAWKVMRGTVISYHLLQRRGVALVSRCEFCGNSTESLDHIFLHCSFAASVWNHFIYIF 600 Query: 798 DVHLFMAHIFNEFLVRLMTFHFIEQVAFLWHATALSCIWLIWHIRNDFAFNDKLWMVDVA 977 ++ L I F + L Q+ LW S +W IWH RN F+ + + V Sbjct: 601 EIGLVPNTIAEVFSLGL-AMDRSPQLKELWLICFTSILWYIWHARNQIRFDSRTFSVAGV 659 Query: 978 ITQLRDLIVESSPSDQYCMDNDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMN 1157 + I SS M N DL IL+ + + P++V+V W P GWIK+N Sbjct: 660 CRLVSRHIQASSRLATGHMHNTIHDLCILKSFGACCRSRRIPRMVEVIWHPPSIGWIKIN 719 Query: 1158 TDGSASGAPGSLTASVVFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*TH 1337 +DG+ G VFR +G F F + A+++ + AI A+ + H Sbjct: 720 SDGAWKHEEGIGGFGAVFRYYKGQFVGAFASHIDIPSSIAAKVMVVITAIELAWVRDWKH 779 Query: 1338 LWLKSDSIYVVDLLHKRSFVVPWCHLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 +WL+ D V+D + S +VPW +W L+ +S M SHI+REGNRVA+ Sbjct: 780 VWLEVDFSTVLDYIRSPS-LVPWQLRVRWLNCLYRISTMTFKSSHIFREGNRVAD 833 Score = 34.3 bits (77), Expect(2) = 1e-40 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +2 Query: 161 CYLTSDNSIRRSFLPSSIWARVRPCIEDCLEESRWILGNNSEV 289 C++ + S RRS+ PSSIW VR +RW++G ++ Sbjct: 387 CFIRNRFSKRRSYAPSSIWPGVRKFWGLVQNNTRWLVGTGDKI 429 >ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 364 Score = 164 bits (415), Expect = 9e-38 Identities = 105/342 (30%), Positives = 169/342 (49%), Gaps = 3/342 (0%) Frame = +3 Query: 486 DTRVWMHSDDGNITSKAAYSHIHPTSPMVHCGS*IWSPHIPERCLIVV*RAIYNRLAVLD 665 D +W+ G +++K A+ + P P + G IWS I R + + + R+ D Sbjct: 3 DKLIWVPLSSGELSAKEAFQFLRPRLPSLDWGKLIWSKFIIPRISLHSWKVLRGRVLSED 62 Query: 666 LLHPRGFIGPSVCGLCCAYVESVDHLFVSFIFAGALWCWIFSLFDVHLFMAHIFNEFLVR 845 LL RG S C LC ES+ H+F++ FA +LW LF++ + LV Sbjct: 63 LLQRRGIALASRCVLCGRDGESLPHIFLTCSFAASLWNNRAGLFELGCLPQN-----LVD 117 Query: 846 LMTFHFI---EQVAFLWHATALSCIWLIWHIRNDFAFNDKLWMVDVAITQLRDLIVESSP 1016 L+ + + Q+ +W + +W IW RN ++ +VD + + +S Sbjct: 118 LLYYGGVGRSHQLKEIWLICYTTTLWFIWKARNKMRHDNCTIVVDAVRQLIMGHVKTASK 177 Query: 1017 SDQYCMDNDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLT 1196 CM N +L +L++ + +P + P+I +VNW PL GWIK+NTDG+ G Sbjct: 178 LALGCMSNSLTELRVLKKFGLLCRPHRAPRITEVNWHPPLFGWIKVNTDGAWQKTTGKSG 237 Query: 1197 ASVVFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDL 1376 +FR+ G F F + +AE++A + AI A+ + H+WL+ DSI V++ Sbjct: 238 YGGIFRDFHGSFLGAFASNLEILNSVDAEVMAVIQAIELAWVRDWEHIWLEVDSIIVLNF 297 Query: 1377 LHKRSFVVPWCHLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 L + +VPW W LH +SQM+ SHI+REGN+VA+ Sbjct: 298 L-QDPHLVPWRLRVGWGNFLHRISQMNFRSSHIFREGNQVAD 338 >ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 409 Score = 147 bits (372), Expect = 9e-33 Identities = 107/370 (28%), Positives = 170/370 (45%), Gaps = 3/370 (0%) Frame = +3 Query: 402 WHFTFLFVEAYLDLVRDIVRFPIA--HSSKDTRVWMHSDDGNITSKAAYSHIHPTSPMVH 575 W+F L +LD+ + I PI+ D +W+ S G + +K A+ + P P + Sbjct: 4 WNFPMLLQFHFLDICKLINDVPISIVPDMSDKLIWVPSSSGELLAKEAFQFMRPRLPSLD 63 Query: 576 CGS*IWSPHIPERCLIVV*RAIYNRLAVLDLLHPRGFIGPSVCGLCCAYVES-VDHLFVS 752 IWS I R + + + R+ DLL RG + S C LC ES H+F++ Sbjct: 64 WSKLIWSKFIIPRISLHSWKVLRGRVLSEDLLQRRGIVLASRCVLCGRDCESSFPHIFLT 123 Query: 753 FIFAGALWCWIFSLFDVHLFMAHIFNEFLVRLMTFHFIEQVAFLWHATALSCIWLIWHIR 932 F +LW LF++ ++ + L+ Q+ +W + +W I R Sbjct: 124 CSFVASLWNNWACLFELGSLPQNLVD--LIYYGGVGRSHQLKEIWLICYTTTLWFIGKAR 181 Query: 933 NDFAFNDKLWMVDVAITQLRDLIVESSPSDQYCMDNDQRDLFILRRLRVPGQP*QDPKIV 1112 N ++ +VD + + S CM N L +L++ + P Q +I Sbjct: 182 NKIRHDNCTIVVDAVHQLIMGHVKAVSKLASGCMSNSLTKLRVLKKFGLLCHPCQALRIT 241 Query: 1113 QVNWQKPLPGWIKMNTDGSASGAPGSLTASVVFRNCRGFFWVCFVKRCGAGYAFEAELVA 1292 +VNW PL GWIK+NTDG+ G +FR+ G F F + +AE++A Sbjct: 242 KVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIFRDFHGSFLGAFASNLEIPNSVDAEVMA 301 Query: 1293 AMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRSFVVPWCHLSKWRYNLHLLSQMDLVISH 1472 + AI A+ + H+ L+ DS V++ LH +VPW LH +SQM+ SH Sbjct: 302 VIQAIELAWVRDWKHILLEVDSAIVLNFLHD-PHLVPWRLRVACGNCLHRISQMNFRSSH 360 Query: 1473 IYREGNRVAN 1502 I+REGN+VA+ Sbjct: 361 IFREGNQVAD 370 >ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 751 Score = 141 bits (356), Expect(2) = 1e-32 Identities = 95/374 (25%), Positives = 161/374 (43%), Gaps = 2/374 (0%) Frame = +3 Query: 291 FWIDNWLGYCIAARIGIPHEYI*LFGQHISEYFYEKSWHFTFLFVEAYLDLVRDIVRFPI 470 FW D WL I ++ + L ++++ +++ W F + D + I+ P+ Sbjct: 375 FWSDKWLHSSIIQQLNMG-SLSHLLNSRVADFIWDQQWALPSHFSNLFPDCAKQILEIPL 433 Query: 471 AHSSK-DTRVWMHSDDGNITSKAAYSHIHPTSPMVHCGS*IWSPHIPERCLIVV*RAIYN 647 ++ + D +W HS G + Y + P + S +W IP R ++ R + Sbjct: 434 PNTPESDILIWEHSSSGIFSFSDGYELVRPYFEKLDWASSVWHSFIPPRYSVLAWRIFHL 493 Query: 648 RLAVLDLLHPRGFIGPSVCGLCC-AYVESVDHLFVSFIFAGALWCWIFSLFDVHLFMAHI 824 +L D L RG SVC LC ++ E + HLFV+ FA +W W+ F L + Sbjct: 494 KLPTDDQLQRRGIPFVSVCQLCSFSHTEDIPHLFVNCSFAQHIWQWLAYYFGTSLPSSGS 553 Query: 825 FNEFLVRLMTFHFIEQVAFLWHATALSCIWLIWHIRNDFAFNDKLWMVDVAITQLRDLIV 1004 N+ + F Q+ +W A+ L + IW N F++K + ++ + Sbjct: 554 LNDLWSSVTGKAFSPQLKNIWFASCLFALMAIWKSHNKLRFDNKQPSLMRVFRSVKAWVR 613 Query: 1005 ESSPSDQYCMDNDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAP 1184 +P C+ D +L + V + V W PL W+K+NT+G + G P Sbjct: 614 YIAPYTPGCV-RGVLDSKVLSSMGVILVLKCQSALRIVLWHPPLIPWLKLNTNGFSKGNP 672 Query: 1185 GSLTASVVFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIY 1364 G VFR+ G + + G F EL+ + + +AF G H+WL+SDS Sbjct: 673 GLAGCGGVFRDSFGRLIGGYCQGLGTQTTFFVELMTVILGVEFAFHFGWHHIWLESDSTT 732 Query: 1365 VVDLLHKRSFVVPW 1406 ++ + SF PW Sbjct: 733 ILQCISSSSFAPPW 746 Score = 26.9 bits (58), Expect(2) = 1e-32 Identities = 9/31 (29%), Positives = 18/31 (58%) Frame = +2 Query: 197 FLPSSIWARVRPCIEDCLEESRWILGNNSEV 289 + SS+W ++ + E SRWI+G+ + + Sbjct: 343 YFTSSVWHGLKRVLPLLFEHSRWIIGDGNSI 373 >gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica] Length = 465 Score = 144 bits (363), Expect = 1e-31 Identities = 97/335 (28%), Positives = 152/335 (45%) Frame = +3 Query: 486 DTRVWMHSDDGNITSKAAYSHIHPTSPMVHCGS*IWSPHIPERCLIVV*RAIYNRLAVLD 665 D VW S G ++K AY P V IW P I + + ++ RL D Sbjct: 105 DLLVWAPSSSGGFSAKDAYEFTRPKFAKVPWCKLIWKPFIEPWKSFLAWKVMHGRLLTED 164 Query: 666 LLHPRGFIGPSVCGLCCAYVESVDHLFVSFIFAGALWCWIFSLFDVHLFMAHIFNEFLVR 845 L R ++ P E+++HLF F ++W +F +F +H F + L Sbjct: 165 FLQKRAWMAP----------ENINHLFSECPFTCSIWSSMFIVFGLH-FTSGPLAVILSS 213 Query: 846 LMTFHFIEQVAFLWHATALSCIWLIWHIRNDFAFNDKLWMVDVAITQLRDLIVESSPSDQ 1025 ++ HF Q+ LW + +WLIW +RN F +K+ V + + + SSP + Sbjct: 214 GLSAHFSPQLMDLWLLMFRTIVWLIWDLRNKLRFEEKVSTVSSNCRTIINHVPASSPLAR 273 Query: 1026 YCMDNDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLTASV 1205 + N DL I+R + V +P + KIV+V W P G++K+ DG+ G + Sbjct: 274 GHILNKVHDLCIIRSIGVHYRPRPNSKIVEVTWHPPCFGFVKIKIDGACKRDSGKAGSGG 333 Query: 1206 VFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHK 1385 VFRN +G F AE++A + AI A+ ++W+++DS+ V + Sbjct: 334 VFRNYQGHVLGAFSANLDVPSGVHAEVLAVIKAIELAWLHAWHNIWIETDSLLVTKFF-R 392 Query: 1386 RSFVVPWCHLSKWRYNLHLLSQMDLVISHIYREGN 1490 +VPW W+ L L M ISHI+REGN Sbjct: 393 SPHLVPWRLRVDWQNCLLRLQHMSFKISHIFREGN 427 >gb|ABD28730.1| Ribonuclease H [Medicago truncatula] Length = 409 Score = 127 bits (320), Expect = 1e-26 Identities = 97/379 (25%), Positives = 165/379 (43%), Gaps = 3/379 (0%) Frame = +3 Query: 375 ISEYFYEKSWHFTFLFVEAYLDLVRDIVRFPIA-HSSKDTRVWMHSDDGNITSKAAYSHI 551 ++ Y W + F LV I + + + D +W S DG++++K A+S + Sbjct: 3 VANYLVNGEWILSDFFAYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSFL 62 Query: 552 HPTSPMVHCGS*IWSPHIPERCLIVV*RAIYNRLAVLDLLHPRG-FIGPSVCGLCCAYVE 728 P VH +W+ + P + R ++N+L D L RG +I C C E Sbjct: 63 PGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAE 122 Query: 729 SVDHLFVSFIFAGALWCWIFSLFDVHLFMAHIFNEFLVRLMTFHFIEQVAFLWHATALSC 908 + H+F+ LW W+ D HL + I N V + ++ + Sbjct: 123 TSSHIFLQCPVTLQLWDWLLKATDQHLDFSSILN----------ISRMVQHVMNSAIVHI 172 Query: 909 IWLIWHIRNDFAFND-KLWMVDVAITQLRDLIVESSPSDQYCMDNDQRDLFILRRLRVPG 1085 +W IW N+ F+ + M + T L +++ S D + +D + R +P Sbjct: 173 MWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQDFKLARLFSIPF 232 Query: 1086 QP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLTASVVFRNCRGFFWVCFVKRCGAG 1265 + + ++ W P G +K+N DGS G+P + V+FR + F F + G Sbjct: 233 KTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYA 292 Query: 1266 YAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRSFVVPWCHLSKWRYNLHLL 1445 A EAE A M+AI A T++W+++DS+ V+ H + VPW +W L Sbjct: 293 TALEAEYSACMFAIEKAKELHLTNIWIETDSVNVIRAFHFNT-GVPWKMHIRWHNCLLFC 351 Query: 1446 SQMDLVISHIYREGNRVAN 1502 + + +H+ REGN VA+ Sbjct: 352 RSIRSLCTHVNREGNLVAD 370 >ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula] gi|355506897|gb|AES88039.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula] Length = 866 Score = 115 bits (287), Expect = 6e-23 Identities = 82/305 (26%), Positives = 138/305 (45%) Frame = +3 Query: 588 IWSPHIPERCLIVV*RAIYNRLAVLDLLHPRGFIGPSVCGLCCAYVESVDHLFVSFIFAG 767 IWSP+IP ++ R + +++ V + L RG + P +C LC ES HLF +A Sbjct: 47 IWSPNIPPSKSLLAWRLMNDKIPVDEKLKERGHVIPFICSLCMTAEESSFHLFFECSYAV 106 Query: 768 ALWCWIFSLFDVHLFMAHIFNEFLVRLMTFHFIEQVAFLWHATALSCIWLIWHIRNDFAF 947 LWCW+ S+ + L + E + L + Q +T ++ + IW+ RN + F Sbjct: 107 HLWCWLASILNQSLHFLAL--EEIWSLSARGWSPQFTLAITSTVINILSAIWNARNTYRF 164 Query: 948 NDKLWMVDVAITQLRDLIVESSPSDQYCMDNDQRDLFILRRLRVPGQP*QDPKIVQVNWQ 1127 ++ + I+Q+ + S+ + + + R+ IL+ V P + + +V Sbjct: 165 KNRKIHWESVISQIIVNVSLSASNSKLSASSGIREFSILKAFNVSIHPLKLLIVKEVISS 224 Query: 1128 KPLPGWIKMNTDGSASGAPGSLTASVVFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAI 1307 P+ GWIK N DG+ A G +FRN +G F CF + G E + + + A Sbjct: 225 PPISGWIKGNCDGAF--AAGKAACGAIFRNSKGQFMGCFAE----GLNNETDFMLVVQA- 277 Query: 1308 HYAFAKG*THLWLKSDSIYVVDLLHKRSFVVPWCHLSKWRYNLHLLSQMDLVISHIYREG 1487 KS I+ PW ++W L++ S M+ ++SHI+REG Sbjct: 278 ------------FKSQDIF------------PWQLTNRWSNCLNITSSMNFIVSHIFREG 313 Query: 1488 NRVAN 1502 N A+ Sbjct: 314 NACAD 318 >ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314263 [Fragaria vesca subsp. vesca] Length = 839 Score = 112 bits (281), Expect = 3e-22 Identities = 94/349 (26%), Positives = 142/349 (40%), Gaps = 3/349 (0%) Frame = +3 Query: 291 FWIDNWLGYCIAARIGIPHEYI*LFGQHISEYFYEKSWHFTFLFVEAYLDLVRDIVRFPI 470 FW NWL I ++GI H+ +S++ SW + L +I+ + Sbjct: 524 FWHGNWLNGSIIDKLGIVHQLGKSLCGKVSDFILNGSWLCSTNLNAELAALWSEILAIQL 583 Query: 471 -AHSSKDTRVWMHSDDGNITSKAAYSHIHPTSPMVHCGS*IWSPHIPERCLIVV*RAIYN 647 ++ D VW+ S +G+++ AY + Sbjct: 584 PSYDIDDKLVWLDSLEGSLSLSIAYEFK------------------------------IS 613 Query: 648 RLAVLDLLHPRGFIGPSVCGLCCAYVESVDHLFVSFIFAGALWCWIFSLFDV--HLFMAH 821 + A + RGF S+C LC A VE+ HLF F+ +WC I SLF V H H Sbjct: 614 KQASVPWDRWRGFSFASMCSLCHASVENSHHLFFECSFSLRVWCAILSLFGVNSHFLDIH 673 Query: 822 IFNEFLVRLMTFHFIEQVAFLWHATALSCIWLIWHIRNDFAFNDKLWMVDVAITQLRDLI 1001 F + ++ F Q+ LW + + IW RN F+++ D I ++ I Sbjct: 674 AFFSYPLQ---HGFGTQLQLLWWGMMGAGFYSIWDARNSIRFHERHSTPDCLIHSIKSQI 730 Query: 1002 VESSPSDQYCMDNDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGA 1181 E M N +L R L + G+ + +I +V+W P +K+NTDG+A G Sbjct: 731 REIDSWGLGTMHNSAGELCTFRALGIKGRASRSHQIREVHWHAPSVFQVKVNTDGAARGT 790 Query: 1182 PGSLTASVVFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG 1328 PG +FR+ G CF G A EAEL A + A A KG Sbjct: 791 PGLAGFGGIFRDHLGNCMGCFAGSMGIATALEAELQAIIHAASMAARKG 839 >ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 197 Score = 110 bits (276), Expect = 1e-21 Identities = 63/157 (40%), Positives = 87/157 (55%) Frame = +3 Query: 1032 MDNDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLTASVVF 1211 M N +L IL R+ + G+P + PKIV+V W +K+NTDG+A G+PG +F Sbjct: 1 MKNTVGELCILHRIGIKGRPSKVPKIVEVMWHVLSIYQVKLNTDGAARGSPGLAGFGGIF 60 Query: 1212 RNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRS 1391 R+ G CF G A EAEL A + AI A +G LW++SDS V+ L Sbjct: 61 RDHLGQVLCCFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWIESDSTLVIHFLSSFQ 120 Query: 1392 FVVPWCHLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 VPW ++W +L+ M + +SHIYREGNRVA+ Sbjct: 121 VDVPWRFTTEWFNCRTILTSMTVKVSHIYREGNRVAD 157 >ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 197 Score = 110 bits (274), Expect = 2e-21 Identities = 61/157 (38%), Positives = 86/157 (54%) Frame = +3 Query: 1032 MDNDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLTASVVF 1211 M N +L IL R+ + G+P + PKIV+V W P +K+NTDG+A G+PG +F Sbjct: 1 MKNTVGELCILHRIGIKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIF 60 Query: 1212 RNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRS 1391 R+ G CF G A EAEL + AI A +G LW++SDS V+ L Sbjct: 61 RDHLGHVLGCFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQ 120 Query: 1392 FVVPWCHLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 VPW ++W +L+ M + +SHIYREGN +A+ Sbjct: 121 VDVPWRFTTEWFNCRTILTTMTVKVSHIYREGNSIAD 157 >ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] gi|355496705|gb|AES77908.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] Length = 666 Score = 107 bits (268), Expect = 1e-20 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 4/337 (1%) Frame = +3 Query: 504 HSDDGNITSKAAYSHIHPTSPMVHCGS*IWSPHIPERCLIVV*RAIYNRLAVLDLLHPRG 683 H G++T++ AY I+ T V +W+ +IP + R ++N+L + L RG Sbjct: 12 HISFGDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRG 71 Query: 684 FIGPSVCGLCCAYVESVDHLFVSFIFAGALWCWIFSLFDVHLFMAHIFNEFLVRLMTFHF 863 + S+C C ES H+F LW W+ D L + + L+R Sbjct: 72 CLIVSICCFCMKSAESSQHIFFECHVTSRLWDWLGKGTDKLLDCSSCL-QLLIRNWG-SG 129 Query: 864 IEQVAFLWHATALSCIWLIWHIRNDFAFNDKLWMVDVAITQLRDLIV-ESSPSDQYCM-- 1034 + V + ++ + IW IW RN F++K A+T L ++I+ E S CM Sbjct: 130 SKLVNNILNSAIIHTIWSIWIERNQRCFHNK----HQAMTTLFNIILAEVKMSFSLCMIK 185 Query: 1035 -DNDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLTASVVF 1211 ++ +D + + +P + + + + W+ P+ +K+N DGS+ G + +V Sbjct: 186 GNSAMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVI 245 Query: 1212 RNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRS 1391 R+ F G EAE A M A+ A H+ L++DS+ VV+ +K Sbjct: 246 RDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNK-G 304 Query: 1392 FVVPWCHLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 VPW ++W+ + HI REGN VA+ Sbjct: 305 LGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVAD 341 >gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis] Length = 203 Score = 106 bits (264), Expect = 3e-20 Identities = 62/155 (40%), Positives = 82/155 (52%) Frame = +3 Query: 1038 NDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLTASVVFRN 1217 N ++ IL +L V + PKI V W P GW+K+N D SA GA + +FRN Sbjct: 35 NSAFEIRILNKLYVRQNFPRSPKIFLVYWIPPPSGWVKVNIDSSAKGALDPIACGGIFRN 94 Query: 1218 CRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRSFV 1397 RGF CF G G+AFEAEL A + AI F G LWL+SDS ++ LL + Sbjct: 95 ARGFVCDCFSVFLGNGFAFEAELWAVINAISITFENGWHKLWLESDSSLIICLLSFKFLQ 154 Query: 1398 VPWCHLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 V W ++W + L +MD SH+YRE N A+ Sbjct: 155 VSWKLRNEWSRAVSLSIRMDFHFSHVYREINGCAD 189 >ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia miltiorrhiza] gi|534292292|gb|AGU16584.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia miltiorrhiza] Length = 119 Score = 106 bits (264), Expect = 3e-20 Identities = 47/80 (58%), Positives = 62/80 (77%) Frame = +3 Query: 1263 GYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRSFVVPWCHLSKWRYNLHL 1442 G+AFEAELV M A+ AF+KG LW++SDSIYVV LL RS +VPW H ++W Y LHL Sbjct: 2 GFAFEAELVGVMMAVDIAFSKGWHSLWIESDSIYVVSLLRSRSMIVPWNHRNRWLYTLHL 61 Query: 1443 LSQMDLVISHIYREGNRVAN 1502 + QM++V++HI+REGN VA+ Sbjct: 62 IRQMNIVVTHIFREGNHVAD 81 >ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 209 Score = 105 bits (261), Expect = 7e-20 Identities = 61/151 (40%), Positives = 81/151 (53%) Frame = +3 Query: 1050 DLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLTASVVFRNCRGF 1229 D +L L V + + P+I V WQ P WIK+NTDG A G P VFR+ G Sbjct: 20 DARLLAFLGVAPKGGKAPRIQHVLWQPPFFPWIKVNTDGLAKGNPSPAACGGVFRDASGG 79 Query: 1230 FWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRSFVVPWC 1409 F F + G +F +EL A + AI A KG +LWL+SDS+ VV +SF PW Sbjct: 80 FLGSFCQSLGWKTSFYSELYAVILAIEIAHDKGWVYLWLESDSVSVVACFSSKSFSPPWN 139 Query: 1410 HLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 +W L ++ QM+ SHI+REGN VA+ Sbjct: 140 LRVRWNNCLSIIRQMNFRCSHIFREGNMVAD 170 >gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris] Length = 234 Score = 102 bits (253), Expect = 6e-19 Identities = 62/196 (31%), Positives = 97/196 (49%) Frame = +3 Query: 915 LIWHIRNDFAFNDKLWMVDVAITQLRDLIVESSPSDQYCMDNDQRDLFILRRLRVPGQP* 1094 +IW +RN F DK+ V AI+ ++DL S + M ND D +++ + + Sbjct: 1 MIWRMRNYARFQDKIG-VSKAISIIKDLTCLVGNSSKASMKNDMLDFNVIKFFGIKTRSG 59 Query: 1095 QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLTASVVFRNCRGFFWVCFVKRCGAGYAF 1274 + + + + W+ P PGW+K+NTDG+A G PG T +FR G F F A Sbjct: 60 KVLRPLPIRWEFPSPGWVKINTDGAARGYPGLATCGGIFRGSMGEFIGAFSAFLEVQTAL 119 Query: 1275 EAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRSFVVPWCHLSKWRYNLHLLSQM 1454 AE + A+ A G T++WL+ DS V R+ VPW ++W L+ + Sbjct: 120 VAEFYGVIHAMEEAQKMGLTNVWLECDSALVCAAFTART-NVPWMLQNRWNTCLNFCGTI 178 Query: 1455 DLVISHIYREGNRVAN 1502 ++HI+REGN A+ Sbjct: 179 RFRVTHIFREGNACAD 194 >ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 235 Score = 101 bits (251), Expect = 1e-18 Identities = 60/151 (39%), Positives = 79/151 (52%) Frame = +3 Query: 1050 DLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGAPGSLTASVVFRNCRGF 1229 D +L L V + + P+I V WQ P WIK+NT+G A G PG VFR+ G Sbjct: 46 DARLLASLGVASKGGKAPRIQHVLWQPPFFPWIKVNTNGLAKGNPGPAACGGVFRDASGG 105 Query: 1230 FWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSIYVVDLLHKRSFVVPWC 1409 F F G +F +EL + AI A KG +LWL+SDS+ VV RSF W Sbjct: 106 FLGSFCHSLGWKTSFYSELYVVILAIEIAHDKGWVYLWLESDSVSVVACFSSRSFSPTWN 165 Query: 1410 HLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 +W L ++ QM+ SHI+REGN VA+ Sbjct: 166 LRVRWNNCLLIIRQMNFRYSHIFREGNIVAD 196 >gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao] Length = 2215 Score = 99.4 bits (246), Expect = 4e-18 Identities = 95/414 (22%), Positives = 169/414 (40%), Gaps = 9/414 (2%) Frame = +3 Query: 288 YFWIDNWLGYCIAARIGIPHEYI*LFGQHISEYFYEKSWHFTFLFVEAYLDLVRDIVRFP 467 +FW D W+G + + Q +S++F SW+ L ++V +IV+ P Sbjct: 1777 FFWHDCWMGE--EPLVNRNQAFASSMAQ-VSDFFLNNSWNVEKLKTVLQQEVVEEIVKIP 1833 Query: 468 IAHSSKDTRVWMHSDDGNITSKAAYSHIHPTSPMVHCGS*IWSPHIPERCLIVV*RAIYN 647 I SS D W + +G+ ++K+A+ I + IW +P + R +++ Sbjct: 1834 IDTSSNDKAYWTTTPNGDFSTKSAWQLIRNRKVENPVFNFIWHKSVPLTTSFFLWRLLHD 1893 Query: 648 RLAVLDLLHPRGFIGPSVCGLCCAYVESVDHLFVSFIFAGALWCWIFSLFDVHLFMAHIF 827 + V + +GF S C CC ES+ H+ A +W + +F + + Sbjct: 1894 WIPVELKMKTKGFQLASRCR-CCKSEESLMHVMWKNPVANQVWSYFAKVFQIQIINPCTI 1952 Query: 828 NEFLVRLMTFHFIEQVAFLWHATALSCIWLIWHIRNDFAFNDKLWMVDVAITQLRDLIVE 1007 N+ + + + L +W +W RND + + + ++ L+ + Sbjct: 1953 NQIICAWFYSGDYSKPGHIRTLVPLFTLWFLWVERNDAKHRNLGMYPNRVVWKILKLLHQ 2012 Query: 1008 SSPSDQYCMDNDQRDLFILRR--LRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGA 1181 Q Q D I + + + PK++ W KP G +K+N DGS Sbjct: 2013 LFQGKQLQKWQWQGDKQIAQEWGIILKADAPSPPKLLF--WLKPSIGELKLNVDGSCKHN 2070 Query: 1182 PGSLTASVVFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSI 1361 P S + R+ G F + G + +AEL+A + + LW++ D+ Sbjct: 2071 PQSAAGGGLLRDHTGSMIFGFSENFGPQDSLQAELMALHRGLLLCIEHNISRLWIEMDAK 2130 Query: 1362 YVVDLL---HKRSFVVPWCHLSKWRYNL----HLLSQMDLVISHIYREGNRVAN 1502 V ++ H+ S S+ RY L LS + ISHI+REGN+ A+ Sbjct: 2131 VAVQMIKEGHQGS--------SRTRYLLASIHRCLSGISFRISHIFREGNQAAD 2176 >gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theobroma cacao] Length = 1368 Score = 98.2 bits (243), Expect = 8e-18 Identities = 100/416 (24%), Positives = 174/416 (41%), Gaps = 11/416 (2%) Frame = +3 Query: 288 YFWIDNWLGYCIAARIGIPHEYI*LFGQH---ISEYFYEKSWHFTFLFVEAYLDLVRDIV 458 +FW D W+G P F Q ++ +F + +W L +V +I+ Sbjct: 898 FFWHDAWMGDEPLVN-SFPS-----FSQSMMKVNYFFNDDAWDVDKLKTFIPNAIVEEIL 951 Query: 459 RFPIAHSSKDTRVWMHSDDGNITSKAAYSHIHPTSPMVHCGS*IWSPHIPERCLIVV*RA 638 + PI+ +D W + +G+ + K+A+ + + G IW IP + R Sbjct: 952 KIPISREKEDIAYWALTANGDFSIKSAWELLRQRKQVNLVGQLIWHKSIPLTVSFFLWRT 1011 Query: 639 IYNRLAVLDLLHPRGFIGPSVCGLCCAYVESVDHLFVSFIFAGALWCWIFSLFDVHLFMA 818 ++N L V + +G S C LCC ES+ H+ A +W + F +++ Sbjct: 1012 LHNWLPVEVRMKAKGIQLASKC-LCCKSEESLLHVLWESPVAQQVWNYFSKFFQIYV--- 1067 Query: 819 HIFNEFLVRLMTFHFIEQVAFLWHATALSCI---WLIWHIRNDFAFNDKLWMVDVAITQL 989 H L L ++++ H L + W +W RND D D I ++ Sbjct: 1068 HNPQNILQILNSWYYSGDFTKPGHIRTLILLFIFWFVWVERNDAKHRDLGMYPDRIIWRI 1127 Query: 990 RDLIVESSPSDQYCMDNDQRDLFILRR--LRVPGQP*QDPKIVQVNWQKPLPGWIKMNTD 1163 ++ + C + DL I + PKI+ NW KPL G +K+N D Sbjct: 1128 MKILRKLFQGGLLCKWQWKGDLDIAIHWGFNFAQERQARPKII--NWIKPLIGELKLNVD 1185 Query: 1164 GSASGAPGSLTASVVFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLW 1343 GS+ + V R+ G F + G + +AEL+A + + +W Sbjct: 1186 GSSKDEFQNAAGGGVLRDHTGNLIFGFSENFGYQNSLQAELLALHRGLCLCMEYNVSRVW 1245 Query: 1344 LKSDSIYVVDLL---HKRSFVVPWCHLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 ++ D+ V+ ++ HK S+ + + L R L ++S + ISHI+REGN+ A+ Sbjct: 1246 IEVDAQVVIQMIQNHHKGSYKIQYL-LESIRKCLQVIS---VRISHIHREGNQAAD 1297 >gb|EOY34748.1| Uncharacterized protein TCM_042328 [Theobroma cacao] Length = 910 Score = 97.4 bits (241), Expect = 1e-17 Identities = 95/410 (23%), Positives = 170/410 (41%), Gaps = 5/410 (1%) Frame = +3 Query: 288 YFWIDNWLGYCIAARIGIPHEYI*LFGQHISEYFYEKSWHFTFLFVEAYLDLVRDIVRFP 467 +FW D W+G A I E+ Q + ++F SW+ L ++V +I + P Sbjct: 473 FFWHDCWMGD--APLISSNQEFTSSMVQ-VCDFFMNNSWNVEKLKTVLQQEVVDEIAKIP 529 Query: 468 IAHSSKDTRVWMHSDDGNITSKAAYSHIHPTSPMVHCGS*IWSPHIPERCLIVV*RAIYN 647 I SKD W + +G+ ++K+A+ I + + IW +P + R +++ Sbjct: 530 IDTMSKDEAYWTPTPNGDFSTKSAWQLIRKRKVVNPVFNFIWHKTVPLTTSFFLWRLLHD 589 Query: 648 RLAVLDLLHPRGFIGPSVCGLCCAYVESVDHLFVSFIFAGALWCWIFSLFDVHLFMAHIF 827 + V + +G S C CC ES+ H+ A +W + LF + + Sbjct: 590 WIPVELKMKSKGLQLASRC-RCCKSEESIMHVMWDNPVAMQVWNYFAKLFQICIINPCTI 648 Query: 828 NEFLVRLMTFHFIEQVAFLWHATALSCIWLIWHIRNDFAFNDKLWMVDVAITQLRDLIVE 1007 N+ + + + L +W +W RND + + + ++ LI + Sbjct: 649 NQIIGAWFHSGDYCKPGHIRTLVPLFILWFLWVERNDAKHRNLGMYPNRVVWRVLKLIQQ 708 Query: 1008 SSPSDQYCMDNDQRDLFILRR--LRVPGQP*QDPKIVQVNWQKPLPGWIKMNTDGSASGA 1181 S Q + D I + + + + PK+ +W KP G K+N DGSA + Sbjct: 709 LSLGQQLLKWQWKGDKQIAQEWGIILQAESLAPPKV--FSWHKPTTGEFKLNVDGSAKHS 766 Query: 1182 PGSLTASVVFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*THLWLKSDSI 1361 + ++ R+ G F + G + +AEL+A + LW++ D+I Sbjct: 767 HNAAGGGIL-RDHAGVMVFGFSENLGIQNSLQAELLALYRGLILCRDYNIRRLWIEMDAI 825 Query: 1362 YVVDLL---HKRSFVVPWCHLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 V+ LL H+ + + +S LLS SHI+REGN+ A+ Sbjct: 826 SVIRLLQGNHRGPHAIRYLMVSL----RQLLSHFSFRFSHIFREGNQAAD 871 >gb|EOY02236.1| Uncharacterized protein TCM_011923 [Theobroma cacao] Length = 1954 Score = 95.5 bits (236), Expect(2) = 1e-17 Identities = 102/418 (24%), Positives = 180/418 (43%), Gaps = 13/418 (3%) Frame = +3 Query: 288 YFWIDNWLGYCIAARIGIPHEYI*LFGQHISEYFYEKSWHFTFLFVEAYLDLVRDIVRFP 467 +FW D W+G PH + H +F +W L + ++LV +I++ P Sbjct: 1517 FFWHDCWMGDQPLVT-SFPHFRNDMSTVH--NFFNGHNWDVDKLNLYLPMNLVDEILQIP 1573 Query: 468 IAHSSKDTRVWMHSDDGNITSKAAYSHIH-PTSPMVHCGS*IWSPHIPERCLIVV*RAIY 644 I S D W + +G ++++A+ I SP V C S +W IP + R + Sbjct: 1574 IDRSQDDVAYWSLTSNGEFSTRSAWEAIRLRKSPNVLC-SLLWHKSIPLSISFFLWRVFH 1632 Query: 645 NRLAVLDLLHPRGFIGPSVCGLCCAYVESVDHLFVSFIFAGALWCWIFSLFDVHLFMAHI 824 N + V L +GF S C +CC ES+ H+ A +W + + F +++ Sbjct: 1633 NWIPVDIRLKEKGFHLASKC-ICCNSEESLIHVLWDNPIAKQVWNFFANSFQIYISKPQN 1691 Query: 825 FNEFLVRLMTFHFIEQVAFLWHATALSCIWLIWHIRNDFA------FNDKL-WMVDVAIT 983 ++ L + + L W +W RND ++D++ W + + Sbjct: 1692 VSQILWTWYLSGDYVRKGHIRILIPLFICWFLWLERNDAKHRHLGMYSDRVVWKIMKLLR 1751 Query: 984 QLRDLIVESSPSDQYCMDNDQRDLFILRRLRVPGQP*QDPKIVQVNWQKPLPGWIKMNTD 1163 QL+D + S +D + L P + P+I+ +W KP+PG K+N D Sbjct: 1752 QLQDGYLLKS-----WQWKGDKDFATMWGLFSPPKTRAAPQIL--HWVKPVPGEHKLNVD 1804 Query: 1164 GSASGAPGSLTASV--VFRNCRGFFWVCFVKRCGAGYAFEAELVAAMWAIHYAFAKG*TH 1337 GS+ + TA++ V R+ G F + G + +AEL A + + + Sbjct: 1805 GSSR---QNQTAAIGGVLRDHTGTLVFDFSENIGPSNSLQAELRALLRGLLLCKERNIEK 1861 Query: 1338 LWLKSDSIYVVDLL---HKRSFVVPWCHLSKWRYNLHLLSQMDLVISHIYREGNRVAN 1502 LW++ D++ + ++ K S + + S +Y L+ ISHI+REGN+ A+ Sbjct: 1862 LWVEMDALVAIQMIQQSQKGSHDIRYLLASIRKY----LNFFSFRISHIFREGNQAAD 1915 Score = 22.3 bits (46), Expect(2) = 1e-17 Identities = 9/29 (31%), Positives = 15/29 (51%) Frame = +2 Query: 206 SSIWARVRPCIEDCLEESRWILGNNSEVF 292 S +W R+ E ++ +RW +G S F Sbjct: 1490 SQVWKRMVRGREVAIQNTRWRIGKGSLFF 1518