BLASTX nr result

ID: Rehmannia26_contig00008204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00008204
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358980.1| PREDICTED: thioredoxin M4, chloroplastic-lik...    60   4e-07
ref|XP_006348246.1| PREDICTED: thioredoxin M4, chloroplastic-lik...    58   1e-06
ref|XP_004251856.1| PREDICTED: thioredoxin M4, chloroplastic-lik...    57   3e-06
gb|ADQ53450.1| plastid thioredoxin M precursor [Nicotiana tabacum]     56   6e-06
ref|XP_004244226.1| PREDICTED: thioredoxin M4, chloroplastic-lik...    55   1e-05

>ref|XP_006358980.1| PREDICTED: thioredoxin M4, chloroplastic-like [Solanum tuberosum]
          Length = 179

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/70 (51%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = -1

Query: 202 MAGLLETLIIPRXXXXXXXXXXXVTGSR--SVRFSEFRGLKIQPTRSSAKLRS-TSNLAR 32
           MAGLLET+ +PR               R  SV+FS F GLKIQ TRSS    S T ++ R
Sbjct: 1   MAGLLETIAVPRAAAGAASPSLSPVAGRRSSVKFSVFNGLKIQSTRSSVSFSSFTKSVPR 60

Query: 31  RGSRIVCEAQ 2
           RG RIVCEAQ
Sbjct: 61  RGGRIVCEAQ 70


>ref|XP_006348246.1| PREDICTED: thioredoxin M4, chloroplastic-like [Solanum tuberosum]
          Length = 182

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/73 (46%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
 Frame = -1

Query: 202 MAGLLETLIIPRXXXXXXXXXXXVTG------SRSVRFSEFRGLKIQPTRSSAKLRSTSN 41
           MA +LET+ +PR           V G        SVRFS+F GLKIQP RSS    S S 
Sbjct: 1   MAAVLETITVPRASALPSSSLAPVAGYSFSGPRSSVRFSQFSGLKIQPIRSSVSTSSCSK 60

Query: 40  LARRGSRIVCEAQ 2
           +  RG R+VCEAQ
Sbjct: 61  IIPRGGRVVCEAQ 73


>ref|XP_004251856.1| PREDICTED: thioredoxin M4, chloroplastic-like [Solanum
           lycopersicum]
          Length = 179

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/70 (50%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
 Frame = -1

Query: 202 MAGLLETLIIPRXXXXXXXXXXXVTGSR--SVRFSEFRGLKIQPTRSSAKLRS-TSNLAR 32
           MAGLLET+ +PR               R  SV+FS F GLKIQ TRSS    S T ++  
Sbjct: 1   MAGLLETIAVPRAAAAAASPSLSPVSGRRSSVKFSLFNGLKIQSTRSSVSFSSFTKSVPS 60

Query: 31  RGSRIVCEAQ 2
           RG RIVCEAQ
Sbjct: 61  RGGRIVCEAQ 70


>gb|ADQ53450.1| plastid thioredoxin M precursor [Nicotiana tabacum]
          Length = 182

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
 Frame = -1

Query: 202 MAGLLETLIIPRXXXXXXXXXXXVTGSR------SVRFSEFRGLKIQPTRSSAKLRSTSN 41
           MAG+LE + +PR           V GS       SVRFS+FRGLKIQ TRSS    S S 
Sbjct: 1   MAGVLEMISVPRASALPSSSLAPVAGSSFSSPRSSVRFSQFRGLKIQSTRSSVSTTSCSK 60

Query: 40  LARRGSRIVCEAQ 2
           +    +RIVCEAQ
Sbjct: 61  IIPGRARIVCEAQ 73


>ref|XP_004244226.1| PREDICTED: thioredoxin M4, chloroplastic-like [Solanum
           lycopersicum]
          Length = 182

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/73 (45%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
 Frame = -1

Query: 202 MAGLLETLIIPRXXXXXXXXXXXVTGSR------SVRFSEFRGLKIQPTRSSAKLRSTSN 41
           MA +LET+ +PR           V G        SV FS+F GLKIQP RSS    S S 
Sbjct: 1   MAAVLETITVPRASALPSSSLAQVAGYSFSGPRFSVSFSQFSGLKIQPIRSSVSTSSCSK 60

Query: 40  LARRGSRIVCEAQ 2
           +  RG R+VCEAQ
Sbjct: 61  IIPRGGRVVCEAQ 73


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