BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00008064
         (1200 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               253   5e-71
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]    235   2e-59
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]   219   7e-59
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...   158   3e-38
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]   155   8e-37
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     158   4e-36
emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]   157   8e-36
emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]   152   3e-35
emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]   152   2e-34
emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]   152   3e-34
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   147   6e-34
gb|ADB85253.1| putative retrotransposon protein [Phyllostachys e...   149   3e-33
emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera]   149   3e-33
gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]     148   4e-33
gb|EMT17614.1| DNA-directed RNA polymerase I subunit RPA2 [Aegil...   144   7e-32
ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group] g...   127   2e-30
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]   129   1e-28
emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]   131   5e-28
emb|CAN61548.1| hypothetical protein VITISV_043524 [Vitis vinifera]   131   5e-28
emb|CAN76896.1| hypothetical protein VITISV_010605 [Vitis vinifera]   131   5e-28

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  253 bits (647), Expect(2) = 5e-71
 Identities = 115/138 (83%), Positives = 128/138 (92%)
 Frame = +3

Query: 780  YLWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFD 959
            YLWHSRLGHVS SRL++LASTG LGNLKT DIS CSGCKLAKFSALPF++S S+S++PFD
Sbjct: 479  YLWHSRLGHVSSSRLRFLASTGALGNLKTCDISDCSGCKLAKFSALPFNRSTSVSSSPFD 538

Query: 960  LIHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSA 1139
            LIHSDVWGPSP++TKGGSRYYVSFIDDHTRYCWVY+MK RS+F  IY +FRAL+KTQHSA
Sbjct: 539  LIHSDVWGPSPVSTKGGSRYYVSFIDDHTRYCWVYLMKHRSEFFEIYAAFRALIKTQHSA 598

Query: 1140 VIKCFRCDLGGEYTSNNF 1193
            VIKCFRCDLGGEYTSN F
Sbjct: 599  VIKCFRCDLGGEYTSNKF 616



 Score = 42.7 bits (99), Expect(2) = 5e-71
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +2

Query: 653 QDPHSQRLIGTGRRHGELYILDELRVP 733
           QD  SQ+LIGTGRR   LYILDEL+VP
Sbjct: 430 QDLQSQKLIGTGRRENGLYILDELKVP 456



 Score =  218 bits (554), Expect = 5e-54
 Identities = 123/232 (53%), Positives = 145/232 (62%), Gaps = 5/232 (2%)
 Frame = +1

Query: 1   LEMDIRTLQQKDMSIQEFYSAMTNLWDQLALTESAELSAFAPYIARRNEQRLVQFLMALR 180
           LE DIR L QK+MSIQEFYSAMT+LWDQLALTES EL A   YI RR +QRLVQFL ALR
Sbjct: 113 LENDIRALHQKNMSIQEFYSAMTDLWDQLALTESVELKACGAYIERREQQRLVQFLTALR 172

Query: 181 DDFESLRGNILHRSPLPTVDSVVNELIADETRHKSASIKGILPTPGPSVLAVPNRPFQKY 360
            DFE LRG+ILHRSPLP+VDSVV+EL+A+E R +S S KGIL    PSVLAVP++PF  +
Sbjct: 173 SDFEGLRGSILHRSPLPSVDSVVSELLAEEIRLQSYSEKGILSASNPSVLAVPSKPFSNH 232

Query: 361 PNKPNPKAVAPDECSFCRTPGHWKAQCPKLMN-----RSGPRTXXXXXXXXXXXXXXLNN 525
            NKP  + V  DECSFC+  GHWKAQCPKL       +SG ++               +N
Sbjct: 233 QNKPYTR-VGFDECSFCKQKGHWKAQCPKLRQQNQAWKSGSQSQSNAHRSPQGYKPPHHN 291

Query: 526 XXXXXXXXXXXXXXDNLYEQFQKFLSLQPHAMXXXXXXXXXXXXXXLPEADW 681
                         + L EQFQKFLSLQP AM              +  ++W
Sbjct: 292 -TAAVASPGSITDPNTLAEQFQKFLSLQPQAMSASSIGQLPHSSSGISHSEW 342


>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
          Length = 732

 Score =  235 bits (600), Expect = 2e-59
 Identities = 110/134 (82%), Positives = 119/134 (88%)
 Frame = +3

Query: 798  LGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDLIHSDV 977
            LGHVS SRLKYLASTG LG L+T DIS C GCKLAKFSALPFSKS S+S APFDL+HSDV
Sbjct: 1    LGHVSASRLKYLASTGALGKLQTSDISDCCGCKLAKFSALPFSKSVSLSYAPFDLVHSDV 60

Query: 978  WGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAVIKCFR 1157
            WGPSP+ TKGGSRYYVSFIDD+TRYCWVY+MK RS+FL IY  FRA+VKTQH+AVIKCFR
Sbjct: 61   WGPSPVPTKGGSRYYVSFIDDYTRYCWVYLMKHRSEFLDIYHMFRAMVKTQHNAVIKCFR 120

Query: 1158 CDLGGEYTSNNFRE 1199
            CDLGGEYTSN F E
Sbjct: 121  CDLGGEYTSNKFSE 134


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score =  219 bits (558), Expect(2) = 7e-59
 Identities = 101/140 (72%), Positives = 114/140 (81%)
 Frame = +3

Query: 780  YLWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFD 959
            Y WHSRLGH+S   LKYL S G LGN +THDIS CSGCKLAKFSAL F++S S   APFD
Sbjct: 379  YSWHSRLGHISAPHLKYLISKGFLGNFQTHDISYCSGCKLAKFSALLFNQSVSPFVAPFD 438

Query: 960  LIHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSA 1139
            LIHS+VWGPS +ATKG S+YYVSFIDDHTRYCWVY+MK R DF+ +YT+F + VKTQHSA
Sbjct: 439  LIHSNVWGPSXVATKGWSKYYVSFIDDHTRYCWVYLMKHRFDFIHVYTTFCSFVKTQHSA 498

Query: 1140 VIKCFRCDLGGEYTSNNFRE 1199
            +IKCFRCDLGG YT   F E
Sbjct: 499  IIKCFRCDLGGGYTFITFSE 518



 Score = 36.6 bits (83), Expect(2) = 7e-59
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +2

Query: 659 PHSQRLIGTGRRHGELYILDELRVP 733
           P SQ LIG GRR   LY++DELR+P
Sbjct: 330 PXSQXLIGXGRRQEGLYVMDELRLP 354



 Score = 64.7 bits (156), Expect = 7e-08
 Identities = 48/127 (37%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
 Frame = +1

Query: 31  KDMSIQEFYSAMTNLWDQLALTESAELSAFAPYIARRNEQRLVQFLMALRDDFESLRGNI 210
           K MS QEFYS M++LWDQL LTE A L +   Y+ RR                E   G I
Sbjct: 110 KRMSTQEFYSTMSDLWDQLELTEXASLQSNVEYLTRR----------------ERGFGEI 153

Query: 211 LH-RSPLPTVDSVVNELIADETRHKSASIKGILPTPGPSVLAVPNRPFQKYPNKPNPKAV 387
            +    +P+ D++V             S KG  P   PSVLA P++PF     K +P  V
Sbjct: 154 FYIIXVIPSXDTMV-------------SRKGPSPASSPSVLAXPSKPFSSNQTK-SPTHV 199

Query: 388 APDECSF 408
           + DECSF
Sbjct: 200 SFDECSF 206


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|78708691|gb|ABB47666.1|
            retrotransposon protein, putative, unclassified,
            expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score =  158 bits (400), Expect(2) = 3e-38
 Identities = 73/138 (52%), Positives = 91/138 (65%)
 Frame = +3

Query: 786  WHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDLI 965
            WH RLGH+  SRL  L + G+LG++       C GCKL K   LP+  S S S+ PFDL+
Sbjct: 325  WHHRLGHLCGSRLATLINQGVLGSVPVDTTFVCKGCKLGKQVQLPYPSSTSRSSRPFDLV 384

Query: 966  HSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAVI 1145
            HSDVWG SP  +KGG  YYV F+DD++RY W+Y MK RS  + IY SF  ++ TQ S+ I
Sbjct: 385  HSDVWGKSPFPSKGGHNYYVIFVDDYSRYTWIYFMKHRSQLISIYQSFAQMIHTQFSSAI 444

Query: 1146 KCFRCDLGGEYTSNNFRE 1199
            + FR D GGEY SN FRE
Sbjct: 445  RIFRSDSGGEYMSNAFRE 462



 Score = 28.5 bits (62), Expect(2) = 3e-38
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +2

Query: 653 QDPHSQRLIGTGRRHGE---LYILDELRVP 733
           QD H+  +IGTG R      LYILD L +P
Sbjct: 272 QDRHTGAVIGTGHRQKRSCGLYILDSLSLP 301


>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
          Length = 1271

 Score =  155 bits (391), Expect(2) = 8e-37
 Identities = 76/138 (55%), Positives = 100/138 (72%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDL 962
            LWHSRLGH   SR++ L S GLLG++ + D   C+ C+L K  ALPF+ S SIS + F+L
Sbjct: 474  LWHSRLGHAPSSRVQQLVSRGLLGSV-SKDNFDCTSCQLGKQPALPFNNSDSISKSIFEL 532

Query: 963  IHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAV 1142
            IHSDVWGPSP+A+ GGSRY+V FIDD++RY W++ MK RS+ L IY++F  +V+TQ S  
Sbjct: 533  IHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKR 592

Query: 1143 IKCFRCDLGGEYTSNNFR 1196
            IK FR D   EYT + F+
Sbjct: 593  IKTFRSDNALEYTQHAFQ 610



 Score = 26.9 bits (58), Expect(2) = 8e-37
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 599 LVFNHMLCLLQVHRLRAPQDPHSQRLIGTGRRHGELYILDELRVP 733
           L+F +  C++Q        DP + + +GTG R G ++ ++ L +P
Sbjct: 416 LIFXYSGCIVQ--------DPRTGQELGTGPRVGRMFPVNNLHLP 452



 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
 Frame = +1

Query: 25  QQKDMSIQEFYSAMTNLWDQLALTESAE--LSAFAPYIARRNEQRLVQFLMALRDDFESL 198
           Q+   SI ++Y  +  +WDQ+ L++      +    Y   R+E RL +FLM+L  DFE +
Sbjct: 127 QEPGQSINDYYDQLRFIWDQIDLSDPTWGCSTDAQQYATIRDEFRLYEFLMSLHKDFEPI 186

Query: 199 RGNILHRSPLPTVDSVVNELIADETRHKSASIKGILP----TPGPSVLAVPNRPFQKYPN 366
           RG +L+RSP P++D+ VNEL+ +E R  +   +  L     TP   ++  P +      +
Sbjct: 187 RGQLLNRSPAPSLDTAVNELVREEARLATLXAQNKLNILAITPSTPLIEQPQQLGDFSGS 246

Query: 367 KPNPKAVAPDECSFCRTPGHWKAQC 441
               K      C++C+ PGH    C
Sbjct: 247 SNRRKQTNKKFCNYCKRPGHTIETC 271


>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  158 bits (400), Expect = 4e-36
 Identities = 74/138 (53%), Positives = 90/138 (65%)
 Frame = +3

Query: 786  WHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDLI 965
            WH RLGH+  SRL  L   G+LGN+       C GCKL K   LP+  S S S +PF L+
Sbjct: 638  WHHRLGHLCGSRLSTLVQQGVLGNVSIETDFVCKGCKLGKQVQLPYRSSMSRSTSPFALV 697

Query: 966  HSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAVI 1145
            HSDVWGP+P  +KGG RYYV F+DD +RY W+Y MK RS+   +Y SF ++V TQ S  I
Sbjct: 698  HSDVWGPAPFHSKGGHRYYVIFVDDFSRYTWIYFMKHRSELYQVYKSFASMVHTQFSTSI 757

Query: 1146 KCFRCDLGGEYTSNNFRE 1199
            K FR D GGEY SN FR+
Sbjct: 758  KNFRSDSGGEYLSNAFRQ 775


>emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
          Length = 1287

 Score =  157 bits (397), Expect = 8e-36
 Identities = 76/138 (55%), Positives = 102/138 (73%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDL 962
            LWHSRLGH S SR++ L S GLLG++ + DI  C+ C++ K  ALPF+ S SIS + F+L
Sbjct: 449  LWHSRLGHASSSRVQQLVSRGLLGSV-SKDIFYCTSCQIGKQPALPFNNSESISHSIFEL 507

Query: 963  IHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAV 1142
            IHSDVWGPSP+A+ GGSRY+V FIDD++RY W++ MK RS+ L IY++F  +++TQ S  
Sbjct: 508  IHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMIETQFSKR 567

Query: 1143 IKCFRCDLGGEYTSNNFR 1196
            IK FR D   EYT + F+
Sbjct: 568  IKTFRSDNALEYTQHAFQ 585



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
 Frame = +1

Query: 25  QQKDMSIQEFYSAMTNLWDQLALTESAELSA--FAPYIARRNEQRLVQFLMALRDDFESL 198
           Q+   SI ++Y  +  +WDQ+ L++     +     Y + R+E RL +FLM+L  DFE +
Sbjct: 99  QEPGQSINDYYDQLRFIWDQIDLSDPTWTCSKDAQQYASIRDEFRLYEFLMSLHKDFEPI 158

Query: 199 RGNILHRSPLPTVDSVVNELIADETR------HKSASIKGILPTPGPSVLAVPNRPFQKY 360
            G +L+RSP P++D+ VNEL+ +E R       K  ++  I  TP   ++  P +    Y
Sbjct: 159 HGQLLNRSPAPSLDTAVNELVREEARLATLQAQKKFNVLAI--TPSTPLIEQPQQSGDSY 216

Query: 361 PNKPNPKAVAPDECSFCRTPGHWKAQC 441
            +    K      C++C+ PGH    C
Sbjct: 217 GSSNRRKQTNKKFCNYCKRPGHTIETC 243


>emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]
          Length = 1261

 Score =  152 bits (385), Expect(2) = 3e-35
 Identities = 75/138 (54%), Positives = 99/138 (71%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDL 962
            LWHSRLGH   SR++ L S GLLG++ + D   C+ C+L K  ALPF+ S SIS + F+L
Sbjct: 392  LWHSRLGHAPSSRVQQLVSRGLLGSV-SKDNFDCTSCQLGKQPALPFNNSESISKSIFEL 450

Query: 963  IHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAV 1142
            IHSDVWGP P+A+ GGSRY+V FIDD++RY W++ MK RS+ L IY++F  +V+TQ S  
Sbjct: 451  IHSDVWGPFPVASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKR 510

Query: 1143 IKCFRCDLGGEYTSNNFR 1196
            IK FR D   EYT + F+
Sbjct: 511  IKTFRSDNALEYTQHAFQ 528



 Score = 24.3 bits (51), Expect(2) = 3e-35
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 656 DPHSQRLIGTGRRHGELYILDELRVP 733
           DP + + +GTG R G ++ ++ L +P
Sbjct: 345 DPRTGQELGTGPRVGRMFPVNNLHLP 370



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
 Frame = +1

Query: 25  QQKDMSIQEFYSAMTNLWDQLALTESAELSA--FAPYIARRNEQRLVQFLMALRDDFESL 198
           Q+   SI ++Y  +  +WDQ+ L++     +     Y + R+E RL +FLM+L  DFE +
Sbjct: 127 QEPGQSINDYYDQLRFIWDQIDLSDPTWACSKDAQQYASIRDEFRLYEFLMSLHKDFEPI 186

Query: 199 RGNILHRSPLPTVDSVVNEL 258
           RG +L+RSP P++D+ VNEL
Sbjct: 187 RGQLLNRSPAPSLDTAVNEL 206


>emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
          Length = 1381

 Score =  152 bits (385), Expect = 2e-34
 Identities = 76/145 (52%), Positives = 100/145 (68%), Gaps = 7/145 (4%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLK-------THDISSCSGCKLAKFSALPFSKSFSI 941
            LWHSRLGH   SR++ L S GLLG++        + D   C+ C+L K  ALPF+ S SI
Sbjct: 474  LWHSRLGHAPSSRVQQLVSRGLLGSVSRGLLGSVSKDNFDCTSCQLGKQPALPFNNSDSI 533

Query: 942  SAAPFDLIHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALV 1121
            S + F+LIHSDVWGPSP+A+ GGSRY+V FIDD++RY W++ MK RS+ L IY++F  +V
Sbjct: 534  SKSIFELIHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMV 593

Query: 1122 KTQHSAVIKCFRCDLGGEYTSNNFR 1196
            +TQ S  IK FR D   EYT + F+
Sbjct: 594  ETQFSKRIKTFRSDNALEYTQHAFQ 618



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
 Frame = +1

Query: 25  QQKDMSIQEFYSAMTNLWDQLALTESA-ELSAFAP-YIARRNEQRLVQFLMALRDDFESL 198
           Q+   SI ++Y  +  +WDQ+ L++   E S  A  Y + R+E RL +FLM+L  DFE +
Sbjct: 127 QEPGQSINDYYDQLRFIWDQIDLSDPIWECSKDAQQYASIRDEFRLYEFLMSLHKDFEPI 186

Query: 199 RGNILHRSPLPTVDSVVNELIADETRHKSASIKGILP----TPGPSVLAVPNRPFQKYPN 366
           RG +L+RS  P++D+ VNEL+ +E R  +   +  L     TP   ++  P +      +
Sbjct: 187 RGQLLNRSXAPSLDTAVNELVREEARLATLQAQNKLNILAITPSTPLIEQPQQLGDFSGS 246

Query: 367 KPNPKAVAPDECSFCRTPGHWKAQC 441
               K      C++C+ PGH    C
Sbjct: 247 NNRRKQNNKKFCNYCKRPGHTIETC 271


>emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]
          Length = 1013

 Score =  152 bits (383), Expect = 3e-34
 Identities = 75/138 (54%), Positives = 99/138 (71%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDL 962
            LWHSRLGH S SR++ L S GLLG + + DI  C+ C+L K   LPF+ S SIS + F+L
Sbjct: 173  LWHSRLGHASSSRVQQLVSRGLLGFV-SKDIFYCTSCQLGKQPTLPFNNSESISNSIFEL 231

Query: 963  IHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAV 1142
            IHSDVWGPSP+A+ GGSRY+V FIDD++RY W++ MK  S+ L IY++F  +++TQ S  
Sbjct: 232  IHSDVWGPSPVASIGGSRYFVVFIDDYSRYIWIFPMKSCSEILSIYSNFAKMIETQFSKR 291

Query: 1143 IKCFRCDLGGEYTSNNFR 1196
            IK FR D   EYT + F+
Sbjct: 292  IKTFRSDNALEYTQHAFQ 309


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  147 bits (370), Expect(2) = 6e-34
 Identities = 74/138 (53%), Positives = 97/138 (70%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDL 962
            L HSRLGH S SR++ L S GLLG+  + DI  C+ C L K  ALPF+   SIS + F+L
Sbjct: 1600 LXHSRLGHXSSSRVQQLVSRGLLGSX-SKDIFXCTSCXLXKQPALPFNNXESISNSIFEL 1658

Query: 963  IHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAV 1142
            IHSDVWGPSP+A+ G SRY+V FIDD++RY W++ MK RS+ L IY++F  +++TQ S  
Sbjct: 1659 IHSDVWGPSPVASIGXSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMIETQFSKR 1718

Query: 1143 IKCFRCDLGGEYTSNNFR 1196
            IK FR D   EYT + F+
Sbjct: 1719 IKTFRSDNALEYTQHAFQ 1736



 Score = 25.4 bits (54), Expect(2) = 6e-34
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 599  LVFNHMLCLLQVHRLRAPQDPHSQRLIGTGRRHGELYILDELRVP 733
            L+F +  C++Q        DP +   +GTG R G ++ +  L +P
Sbjct: 1542 LIFXYSGCIVQ--------DPRTGXELGTGPRVGXMFPVSNLHLP 1578



 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
 Frame = +1

Query: 25   QQKDMSIQEFYSAMTNLWDQLALTESAE--LSAFAPYIARRNEQRLVQFLMALRDDFESL 198
            Q+   SI ++Y  +  +WDQ+ L++     L     Y + R+E RL +FLM+L  DFE +
Sbjct: 1250 QEPGQSINDYYDQLRFIWDQIDLSDPTWTCLKDAKQYASIRDEFRLYEFLMSLHKDFEPI 1309

Query: 199  RGNILHRSPLPTVDSVVNELIADE----TRHKSASIKGILPTPGPSVLAVPNRPFQKYPN 366
            RG +L+RSP P++D+ VNEL+ +E    T         +  TP   ++  P +    Y +
Sbjct: 1310 RGQLLNRSPAPSLDTAVNELVREEAXLATLQAQNKFNVLAITPSTPLIEQPQQSGDSYGS 1369

Query: 367  KPNPKAVAPDECSFCRTPGHWKAQC 441
                K      C++C+ PGH    C
Sbjct: 1370 SNRRKQTNKKFCNYCKRPGHTIETC 1394


>gb|ADB85253.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 861

 Score =  149 bits (375), Expect = 3e-33
 Identities = 67/138 (48%), Positives = 89/138 (64%)
 Frame = +3

Query: 786  WHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDLI 965
            WH RLGH+  S L  L   G+LG +       C GCKL K+  LP+  S S+S+ PFDL+
Sbjct: 392  WHHRLGHLCGSCLSSLVRQGVLGRVPVDTSMFCQGCKLGKWLQLPYHSSESLSSRPFDLV 451

Query: 966  HSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAVI 1145
            HSDVWGP+PI +KGG + YV FIDD++R+ W++ +     FL IY SF  +V+TQ  + I
Sbjct: 452  HSDVWGPAPIISKGGHKSYVIFIDDYSRFTWIFPISNCGQFLAIYRSFATMVRTQFDSPI 511

Query: 1146 KCFRCDLGGEYTSNNFRE 1199
            + FRCD  GEY S  FR+
Sbjct: 512  RTFRCDSAGEYCSGTFRQ 529



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   LEMDIRTLQQKDMSIQEFYSAMTNLWDQL-ALTESAELSAFAPYIARRNEQRLVQFLMAL 177
           L+ ++ TL Q+D S+ +F+ A+T+LW QL  L             A  +  RL  F+  L
Sbjct: 83  LQRELETLHQEDSSVDDFFQALTSLWRQLDELASPLCQECHEVQKADHDRLRLYDFVCRL 142

Query: 178 RDDFESLRGNILHRSPLPTVDSVVNELIADETRHKSAS--IKGILPTP 315
           R +FE +R  +L RSP PTV   ++ L A+E R   A+  +  +L TP
Sbjct: 143 RPEFEPVRAQLLSRSPRPTVTETLSTLRAEELRRGLAAQFVLTVLATP 190


>emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera]
          Length = 1293

 Score =  149 bits (375), Expect = 3e-33
 Identities = 75/138 (54%), Positives = 97/138 (70%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDL 962
            LWHSRLGH   S+++ L S GLLG++ + D   C+ C+L K  ALPF+ S SIS + F+L
Sbjct: 284  LWHSRLGHTPSSQVQQLVSRGLLGSV-SKDNFDCTSCQLGKQPALPFNNSESISNSIFEL 342

Query: 963  IHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAV 1142
            IHSDVWGPSPIA+ GGSRY+V FIDD++RY W++ M  RS  L IY++F  +V+TQ S  
Sbjct: 343  IHSDVWGPSPIASIGGSRYFVVFIDDYSRYSWIFPMXSRSXILPIYSNFAKMVETQFSKX 402

Query: 1143 IKCFRCDLGGEYTSNNFR 1196
            IK FR D   EYT   F+
Sbjct: 403  IKTFRSDNALEYTQYAFQ 420


>gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1204

 Score =  148 bits (374), Expect = 4e-33
 Identities = 68/138 (49%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
 Frame = +3

Query: 786  WHSRLGHVSFSRLKYLASTGLLGNLK-THDISSCSGCKLAKFSALPFSKSFSISAAPFDL 962
            WH RLGH+  SRL  L   GLLG++     ++ C GCKL K   LP+  S S+S  PFDL
Sbjct: 497  WHHRLGHLCGSRLSALVRRGLLGSVSGAVSLNQCQGCKLGKQIQLPYHSSESVSKRPFDL 556

Query: 963  IHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAV 1142
            +HSDVWGP+P  +KGG RYY+ FIDD +R+ W+Y M  RS+ L IY SF  +++T   + 
Sbjct: 557  VHSDVWGPAPFVSKGGHRYYIIFIDDFSRHTWIYFMTHRSEVLAIYKSFARMIRTHFDSP 616

Query: 1143 IKCFRCDLGGEYTSNNFR 1196
            I+ FR D  GEY S   R
Sbjct: 617  IRVFRADSAGEYLSRELR 634



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
 Frame = +1

Query: 16  RTLQQKDMSIQEFYSAMTNLWDQLALTESAELSAFAPYIARRNE---QRLVQFLMALRDD 186
           ++LQQ D ++ EFY+ ++++W QL          +     +R+    +R+  FL  LR +
Sbjct: 149 QSLQQGDSTVDEFYTQLSSIWRQLDSLGPTICHTYPCCQRQRSHMDLRRIYDFLTRLRSE 208

Query: 187 FESLRGNILHRSPLPTVDSVVNELIADETRHKSASIKGILPTP------------GPSVL 330
           +ES R  +L R P  T+   + E+ ++E R + A   GILP P              S  
Sbjct: 209 YESTRAQLLSRHPRVTIMEALTEIRSEEIRLREA---GILPLPSSVLAVRTVASSASSTP 265

Query: 331 AVPNRPFQKYPNKPNPKAVAPD-----ECSFCRTPGHWKAQC 441
           AV +       +   P  V P       C++C   GH ++ C
Sbjct: 266 AVHSTVSSSSSSARPPTTVVPSTRGHLHCTYCDKDGHVESFC 307


>gb|EMT17614.1| DNA-directed RNA polymerase I subunit RPA2 [Aegilops tauschii]
          Length = 1856

 Score =  144 bits (363), Expect = 7e-32
 Identities = 68/137 (49%), Positives = 88/137 (64%)
 Frame = +3

Query: 786  WHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDLI 965
            WH RLGH+  SRL  L   G+LG++       C+GC+L K + LP+  S S+S  PFDL+
Sbjct: 1283 WHHRLGHICGSRLSSLVRQGILGSVSGDVSLHCNGCRLGKQTQLPYPTSESVSQRPFDLV 1342

Query: 966  HSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSAVI 1145
            HSDVWGP+P  +KGG RYY+ FIDD +RY  +Y+MK RS+ L IY  F A+V TQ S   
Sbjct: 1343 HSDVWGPAPFDSKGGHRYYILFIDDFSRYTLLYIMKSRSEVLSIYKRFAAMVHTQFSTPT 1402

Query: 1146 KCFRCDLGGEYTSNNFR 1196
            + FR D  GE+ S   R
Sbjct: 1403 RTFRADSAGEFISQLLR 1419


>ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group]
            gi|255677175|dbj|BAH93597.1| Os06g0583500, partial [Oryza
            sativa Japonica Group]
          Length = 174

 Score =  127 bits (320), Expect(2) = 2e-30
 Identities = 57/105 (54%), Positives = 72/105 (68%)
 Frame = +3

Query: 786  WHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSISAAPFDLI 965
            WH RLGH+  SRL  L   G+LG++       C+GCKL K   LP+  S S ++ PFDL+
Sbjct: 70   WHHRLGHLCGSRLSTLIRQGVLGHVSIDTTFDCTGCKLGKQIQLPYPISNSRTSCPFDLV 129

Query: 966  HSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIY 1100
            HSDVWGP+P A+KGG +YYV FIDD++RY W+Y MK RS  L IY
Sbjct: 130  HSDVWGPAPFASKGGHKYYVIFIDDYSRYTWIYFMKHRSQLLSIY 174



 Score = 33.1 bits (74), Expect(2) = 2e-30
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
 Frame = +2

Query: 653 QDPHSQRLIGTGRRH----GELYILDELRVP 733
           QD  ++ L+GTG RH    G+LY+LD L +P
Sbjct: 15  QDRQTRALVGTGHRHSSSPGKLYVLDHLSLP 45


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score =  129 bits (324), Expect(2) = 1e-28
 Identities = 64/139 (46%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISS-CSGCKLAKFSALPFSKSFSISAAPFD 959
            LWH+RLGHV++S + +L   G L         S CS C+LAK   LP+S++   S+   D
Sbjct: 429  LWHARLGHVNYSVISFLNKKGHLSLTSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLD 488

Query: 960  LIHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSA 1139
            LIH D+WGPSPI +  G  YYV FIDD++R+ W+Y +K +SDF  I+  F+  V+ QHSA
Sbjct: 489  LIHCDLWGPSPIKSNSGFLYYVIFIDDYSRFTWLYPLKFKSDFFDIFLQFQKFVENQHSA 548

Query: 1140 VIKCFRCDLGGEYTSNNFR 1196
             IK F+ D G E+T+  F+
Sbjct: 549  RIKVFQSDGGAEFTNTCFK 567



 Score = 25.4 bits (54), Expect(2) = 1e-28
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +2

Query: 593 NSLVFNHMLCLLQVHRLRAPQDPHSQRLIGTGRRHGELYILD 718
           + L  +  L +   + L   Q+  + R++ TG+R G LY+L+
Sbjct: 367 SKLTSDFPLSVTFTNNLFTVQNRQTGRVVATGKRDGGLYVLE 408


>emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]
          Length = 1264

 Score =  131 bits (330), Expect = 5e-28
 Identities = 62/140 (44%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSI-SAAPFD 959
            LWH RLGH+S   +K L S G L  LK+ D   C  C L K   + F K+     A   +
Sbjct: 414  LWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLE 473

Query: 960  LIHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSA 1139
            L+H+D+WGPSP+A+ GGSRYY++FIDD +R  WVY +K +SD    +  ++A+V+T+   
Sbjct: 474  LVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGL 533

Query: 1140 VIKCFRCDLGGEYTSNNFRE 1199
             +KC R D GGEY    F E
Sbjct: 534  KVKCLRSDNGGEYIDGGFSE 553


>emb|CAN61548.1| hypothetical protein VITISV_043524 [Vitis vinifera]
          Length = 1535

 Score =  131 bits (330), Expect = 5e-28
 Identities = 62/140 (44%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSI-SAAPFD 959
            LWH RLGH+S   +K L S G L  LK+ D   C  C L K   + F K+     A   +
Sbjct: 681  LWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLE 740

Query: 960  LIHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSA 1139
            L+H+D+WGPSP+A+ GGSRYY++FIDD +R  WVY +K +SD    +  ++A+V+T+   
Sbjct: 741  LVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGL 800

Query: 1140 VIKCFRCDLGGEYTSNNFRE 1199
             +KC R D GGEY    F E
Sbjct: 801  KVKCLRSDNGGEYIDGGFSE 820


>emb|CAN76896.1| hypothetical protein VITISV_010605 [Vitis vinifera]
          Length = 1146

 Score =  131 bits (330), Expect = 5e-28
 Identities = 62/140 (44%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
 Frame = +3

Query: 783  LWHSRLGHVSFSRLKYLASTGLLGNLKTHDISSCSGCKLAKFSALPFSKSFSI-SAAPFD 959
            LWH RLGH+S   +K L S G L  LK+ D   C  C L K   + F K+     A   +
Sbjct: 383  LWHXRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLE 442

Query: 960  LIHSDVWGPSPIATKGGSRYYVSFIDDHTRYCWVYMMKRRSDFLGIYTSFRALVKTQHSA 1139
            L+H+D+WGPSP+A+ GGSRYY++FIDD +R  WVY +K +SD    +  ++A+V+T+   
Sbjct: 443  LVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGL 502

Query: 1140 VIKCFRCDLGGEYTSNNFRE 1199
             +KC R D GGEY    F E
Sbjct: 503  KVKCLRSDNGGEYIDGGFSE 522