BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00006711
         (366 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...   246   3e-63
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   242   4e-62
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...   238   5e-61
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   232   3e-59
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...   231   6e-59
gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus n...   230   1e-58
ref|XP_006406653.1| hypothetical protein EUTSA_v10019931mg [Eutr...   229   3e-58
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...   229   3e-58
gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptid...   229   3e-58
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...   229   4e-58
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   228   5e-58
ref|XP_006300099.1| hypothetical protein CARUB_v10016327mg [Caps...   228   8e-58
gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...   227   1e-57
dbj|BAD43874.1| putative DNA-directed RNA polymerase subunit [Ar...   227   1e-57
ref|NP_189020.2| nuclear RNA polymerase D2A [Arabidopsis thalian...   227   1e-57
ref|XP_002883108.1| NRPD2a [Arabidopsis lyrata subsp. lyrata] gi...   226   2e-57
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...   226   2e-57
ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV a...   226   2e-57
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub...   226   3e-57
ref|XP_003603295.1| DNA-directed RNA polymerase subunit beta [Me...   226   3e-57

>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score =  246 bits (627), Expect = 3e-63
 Identities = 115/121 (95%), Positives = 119/121 (98%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            ITAQLHRLGFSRWGDERVYDGRTGEKV SLIFMGPTFYQRLTHM+EDK+KFRNTGPVHPL
Sbjct: 649  ITAQLHRLGFSRWGDERVYDGRTGEKVESLIFMGPTFYQRLTHMAEDKIKFRNTGPVHPL 708

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMH+CRKC N+ANVIQ
Sbjct: 709  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHVCRKCQNMANVIQ 768

Query: 4    R 2
            R
Sbjct: 769  R 769


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  242 bits (617), Expect = 4e-62
 Identities = 112/121 (92%), Positives = 117/121 (96%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            +T QLHR GFSRWG ERVY+GRTGE +HSL+FMGPTFYQRLTHMSEDKVKFRNTGPVHPL
Sbjct: 847  VTDQLHRAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 906

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNN+ANVIQ
Sbjct: 907  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQ 966

Query: 4    R 2
            R
Sbjct: 967  R 967


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score =  238 bits (608), Expect = 5e-61
 Identities = 113/121 (93%), Positives = 117/121 (96%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            ITAQLHRLGFSRWG E+VYDGRTGE + SLIFMGPTFYQRLTHM+EDKVKFRNTGPVHPL
Sbjct: 1033 ITAQLHRLGFSRWGAEKVYDGRTGEALKSLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPL 1092

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKC N+ANVIQ
Sbjct: 1093 TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNMANVIQ 1152

Query: 4    R 2
            R
Sbjct: 1153 R 1153


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  232 bits (592), Expect = 3e-59
 Identities = 110/121 (90%), Positives = 115/121 (95%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG+ERVY+GRTGE V SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPL
Sbjct: 1031 ITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL 1090

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSSQMHIC+KC NVANVIQ
Sbjct: 1091 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQ 1150

Query: 4    R 2
            R
Sbjct: 1151 R 1151


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score =  231 bits (590), Expect = 6e-59
 Identities = 110/121 (90%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFS+WG ER+YDGRTGE V SLIF+GPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 1026 ITEQLHRAGFSKWGTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPL 1085

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS QMHICRKC NVANVIQ
Sbjct: 1086 TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQ 1145

Query: 4    R 2
            R
Sbjct: 1146 R 1146


>gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
          Length = 1196

 Score =  230 bits (587), Expect = 1e-58
 Identities = 106/121 (87%), Positives = 115/121 (95%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLH+ GFSRWG+ERVY+GRTGE V SLIFMGPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 1024 ITEQLHKAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPL 1083

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTLSDSSQMHIC +C+NVAN+IQ
Sbjct: 1084 TRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMHICHRCHNVANIIQ 1143

Query: 4    R 2
            R
Sbjct: 1144 R 1144


>ref|XP_006406653.1| hypothetical protein EUTSA_v10019931mg [Eutrema salsugineum]
            gi|557107799|gb|ESQ48106.1| hypothetical protein
            EUTSA_v10019931mg [Eutrema salsugineum]
          Length = 1169

 Score =  229 bits (584), Expect = 3e-58
 Identities = 108/121 (89%), Positives = 114/121 (94%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG+ERVY+GR+GE + SLIFMGPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 996  ITDQLHRAGFSRWGNERVYNGRSGEMMRSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPL 1055

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSSQMHICR C NVANVI+
Sbjct: 1056 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRTCQNVANVIE 1115

Query: 4    R 2
            R
Sbjct: 1116 R 1116


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score =  229 bits (584), Expect = 3e-58
 Identities = 109/121 (90%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            I  QLH  GFSRWG+ERVY+GRTGE VHSLIFMGPTFYQRL HM+EDKVKFRNTGPVHPL
Sbjct: 1048 ILKQLHGRGFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL 1107

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHIC KC N+ANVIQ
Sbjct: 1108 TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQ 1167

Query: 4    R 2
            R
Sbjct: 1168 R 1168


>gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative
           [Solanum bulbocastanum]
          Length = 304

 Score =  229 bits (584), Expect = 3e-58
 Identities = 109/121 (90%), Positives = 113/121 (93%)
 Frame = -3

Query: 364 ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
           I  QLH  GFSRWG+ERVY+GRTGE VHSLIFMGPTFYQRL HM+EDKVKFRNTGPVHPL
Sbjct: 133 ILKQLHGRGFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL 192

Query: 184 TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
           TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHIC KC N+ANVIQ
Sbjct: 193 TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQ 252

Query: 4   R 2
           R
Sbjct: 253 R 253


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score =  229 bits (583), Expect = 4e-58
 Identities = 109/121 (90%), Positives = 112/121 (92%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            I  QLH  GFSRWG ERVY+GRTGE VHSLIFMGPTFYQRL HM+EDKVKFRNTGPVHPL
Sbjct: 1048 ILKQLHGRGFSRWGSERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL 1107

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHIC KC N+ANVIQ
Sbjct: 1108 TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQ 1167

Query: 4    R 2
            R
Sbjct: 1168 R 1168


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score =  228 bits (582), Expect = 5e-58
 Identities = 107/121 (88%), Positives = 114/121 (94%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG ERVY+GRTGE + SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPL
Sbjct: 1025 ITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL 1084

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSSQMH+C+KC NVA+VIQ
Sbjct: 1085 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQ 1144

Query: 4    R 2
            R
Sbjct: 1145 R 1145


>ref|XP_006300099.1| hypothetical protein CARUB_v10016327mg [Capsella rubella]
            gi|482568808|gb|EOA32997.1| hypothetical protein
            CARUB_v10016327mg [Capsella rubella]
          Length = 1161

 Score =  228 bits (580), Expect = 8e-58
 Identities = 107/121 (88%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG+ERVY+GR+GE + SLIFMGPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 989  ITEQLHRAGFSRWGNERVYNGRSGEMMRSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPL 1048

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSSQMHICRKC   ANVI+
Sbjct: 1049 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIE 1108

Query: 4    R 2
            R
Sbjct: 1109 R 1109


>gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1184

 Score =  227 bits (578), Expect = 1e-57
 Identities = 106/121 (87%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG+ERVY+GRTGE V SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPL
Sbjct: 1012 ITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL 1071

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKR+GGIKFGEMERDCLIAHGA+ANLHERL TLSDSSQMH+CR C NVANVI+
Sbjct: 1072 TRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIE 1131

Query: 4    R 2
            R
Sbjct: 1132 R 1132


>dbj|BAD43874.1| putative DNA-directed RNA polymerase subunit [Arabidopsis thaliana]
          Length = 639

 Score =  227 bits (578), Expect = 1e-57
 Identities = 106/121 (87%), Positives = 113/121 (93%)
 Frame = -3

Query: 364 ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
           IT QLHR GFSRWG+ERVY+GR+GE + S+IFMGPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 467 ITEQLHRAGFSRWGNERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPL 526

Query: 184 TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
           TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSSQMHICRKC   ANVI+
Sbjct: 527 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIE 586

Query: 4   R 2
           R
Sbjct: 587 R 587


>ref|NP_189020.2| nuclear RNA polymerase D2A [Arabidopsis thaliana]
            gi|334185578|ref|NP_001189957.1| nuclear RNA polymerase
            D2A [Arabidopsis thaliana]
            gi|75335101|sp|Q9LK40.1|NRPD2_ARATH RecName:
            Full=DNA-directed RNA polymerases IV and V subunit 2;
            AltName: Full=DNA-directed RNA polymerase D subunit 2a;
            Short=AtNRPD2a; Short=Nuclear RNA polymerase D 2a;
            AltName: Full=Nuclear RNA polymerase E 2; AltName:
            Full=Protein DEFECTIVE IN MERISTEM SILENCING 2; AltName:
            Full=Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 2;
            AltName: Full=RNA polymerase IV subunit 2a; Short=POL IV
            2a gi|9293951|dbj|BAB01854.1| DNA-directed RNA
            polymerase, subunit B [Arabidopsis thaliana]
            gi|57791156|gb|AAW56422.1| polymerase IV second largest
            subunit [Arabidopsis thaliana] gi|62183738|gb|AAX73261.1|
            RNA polymerase IV second-largest subunit [Arabidopsis
            thaliana] gi|332643291|gb|AEE76812.1| nuclear RNA
            polymerase D2A [Arabidopsis thaliana]
            gi|332643292|gb|AEE76813.1| nuclear RNA polymerase D2A
            [Arabidopsis thaliana]
          Length = 1172

 Score =  227 bits (578), Expect = 1e-57
 Identities = 106/121 (87%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG+ERVY+GR+GE + S+IFMGPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 1000 ITEQLHRAGFSRWGNERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPL 1059

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSSQMHICRKC   ANVI+
Sbjct: 1060 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIE 1119

Query: 4    R 2
            R
Sbjct: 1120 R 1120


>ref|XP_002883108.1| NRPD2a [Arabidopsis lyrata subsp. lyrata] gi|297328948|gb|EFH59367.1|
            NRPD2a [Arabidopsis lyrata subsp. lyrata]
          Length = 1169

 Score =  226 bits (577), Expect = 2e-57
 Identities = 106/121 (87%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG+ERVY+GR+GE + SLIFMGPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 997  ITEQLHRAGFSRWGNERVYNGRSGEMMRSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPL 1056

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVAD+KRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSSQMHICRKC   ANVI+
Sbjct: 1057 TRQPVADKKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIE 1116

Query: 4    R 2
            R
Sbjct: 1117 R 1117


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score =  226 bits (576), Expect = 2e-57
 Identities = 107/121 (88%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            I  QLHR  FSRWG+ERVY+GRTGE V SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPL
Sbjct: 1009 IIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPL 1068

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSDSS+MHIC+KC NVANVIQ
Sbjct: 1069 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQ 1128

Query: 4    R 2
            R
Sbjct: 1129 R 1129


>ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score =  226 bits (576), Expect = 2e-57
 Identities = 108/121 (89%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG+ERVY+GRTGE V SLIFMGPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 1033 ITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPL 1092

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANL+ERLFTLSDSSQ+HIC KC NVANVI 
Sbjct: 1093 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVIL 1152

Query: 4    R 2
            R
Sbjct: 1153 R 1153


>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
            arietinum]
          Length = 1199

 Score =  226 bits (575), Expect = 3e-57
 Identities = 108/121 (89%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG+ERVY+GRTGE V SLIFMGPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 1027 ITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPL 1086

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANL+ERLFTLSDSSQ+HIC KC NVANVI 
Sbjct: 1087 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVIL 1146

Query: 4    R 2
            R
Sbjct: 1147 R 1147


>ref|XP_003603295.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355492343|gb|AES73546.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1237

 Score =  226 bits (575), Expect = 3e-57
 Identities = 108/121 (89%), Positives = 113/121 (93%)
 Frame = -3

Query: 364  ITAQLHRLGFSRWGDERVYDGRTGEKVHSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPL 185
            IT QLHR GFSRWG+ERVY+GRTGE V SLIFMGPTFYQRL HMSEDKVKFRNTGPVHPL
Sbjct: 1065 ITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPL 1124

Query: 184  TRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNVANVIQ 5
            TRQPVADRKRFGGIKFGEMERDCLIAHGA+ANL+ERLFTLSDSSQ+HIC KC NVANVI 
Sbjct: 1125 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVIL 1184

Query: 4    R 2
            R
Sbjct: 1185 R 1185