BLASTX nr result
ID: Rehmannia26_contig00006003
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia26_contig00006003 (1612 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 246 2e-62 ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 246 2e-62 ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 246 3e-62 ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 231 9e-58 ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612... 229 3e-57 ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 228 7e-57 gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 224 6e-56 gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 213 2e-52 ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 212 3e-52 ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608... 205 5e-50 ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 204 9e-50 ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 203 1e-49 gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ... 197 1e-47 gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 196 2e-47 gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 196 2e-47 gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 192 3e-46 gb|ABA96203.1| retrotransposon protein, putative, unclassified, ... 190 2e-45 ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] g... 190 2e-45 gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group] 190 2e-45 gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo... 189 3e-45 >ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2 [Citrus sinensis] Length = 765 Score = 246 bits (628), Expect = 2e-62 Identities = 144/466 (30%), Positives = 227/466 (48%), Gaps = 1/466 (0%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ WRIIQ+P+SLV +V+K +Y +H F++A +G+NPS+IWRS+ W ++++ KGL W++ Sbjct: 278 AKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWRI 337 Query: 1403 GNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELICNNS-WNESLILSVFPPCVANE 1227 G+ K ++++Q WLP P S L + VS LI + W + +I F A + Sbjct: 338 GDGKLVKVYQSGWLPRPETFKPISPPSLPLDTTVSVLIDEDQCWRDDVIRQHFHQEDAAQ 397 Query: 1226 ILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRHIEKWWNFIWSLN 1047 IL+IPL S D W ++ KG YSV+ GY++A+ SS+ WN IW L Sbjct: 398 ILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDNNSWNSIWYLQ 457 Query: 1046 IPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMRSFWKH 867 IP K F WR ++D LP NL + C+ C +++ HS+F C R WK Sbjct: 458 IPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKL 517 Query: 866 QLFYHFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQKMIHSNEKPHALKM 687 F +K+ + L L L + + SKTE E+ A+ W W R I N+K Sbjct: 518 TTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLS 577 Query: 686 TVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVDASFNSDKGIFSVGG 507 + Y+ + Q+ + S W+CPP G +++VDA+ + +G Sbjct: 578 VAGAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGI 637 Query: 506 IIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHFISSDSLLSVQAVT 327 +IRNS G + + + E A GL +++ A P + +DS V+ Sbjct: 638 VIRNSEGKFITAAIKPSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDLVS 697 Query: 326 NDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFA 189 K + VS ++ + + K+ H R+ N AH ++ A Sbjct: 698 ARKSTKAEIFWIVSEVQDTMKRLKHVKLQHSPRACNGFAHTLAKLA 743 >ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1 [Citrus sinensis] Length = 968 Score = 246 bits (628), Expect = 2e-62 Identities = 144/466 (30%), Positives = 227/466 (48%), Gaps = 1/466 (0%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ WRIIQ+P+SLV +V+K +Y +H F++A +G+NPS+IWRS+ W ++++ KGL W++ Sbjct: 481 AKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWRI 540 Query: 1403 GNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELICNNS-WNESLILSVFPPCVANE 1227 G+ K ++++Q WLP P S L + VS LI + W + +I F A + Sbjct: 541 GDGKLVKVYQSGWLPRPETFKPISPPSLPLDTTVSVLIDEDQCWRDDVIRQHFHQEDAAQ 600 Query: 1226 ILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRHIEKWWNFIWSLN 1047 IL+IPL S D W ++ KG YSV+ GY++A+ SS+ WN IW L Sbjct: 601 ILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDNNSWNSIWYLQ 660 Query: 1046 IPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMRSFWKH 867 IP K F WR ++D LP NL + C+ C +++ HS+F C R WK Sbjct: 661 IPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKL 720 Query: 866 QLFYHFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQKMIHSNEKPHALKM 687 F +K+ + L L L + + SKTE E+ A+ W W R I N+K Sbjct: 721 TTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLS 780 Query: 686 TVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVDASFNSDKGIFSVGG 507 + Y+ + Q+ + S W+CPP G +++VDA+ + +G Sbjct: 781 VAGAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGI 840 Query: 506 IIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHFISSDSLLSVQAVT 327 +IRNS G + + + E A GL +++ A P + +DS V+ Sbjct: 841 VIRNSEGKFITAAIKPSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDLVS 900 Query: 326 NDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFA 189 K + VS ++ + + K+ H R+ N AH ++ A Sbjct: 901 ARKSTKAEIFWIVSEVQDTMKRLKHVKLQHSPRACNGFAHTLAKLA 946 >ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis] Length = 769 Score = 246 bits (627), Expect = 3e-62 Identities = 143/463 (30%), Positives = 226/463 (48%), Gaps = 1/463 (0%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ WRIIQ+P+SLV +V+K +Y +H F++A +G+NPS+IWRS+ W ++++ KGL W++ Sbjct: 278 AKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWRI 337 Query: 1403 GNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELICNNS-WNESLILSVFPPCVANE 1227 G+ K ++++Q WLP P S L + VS LI + W + +I F A + Sbjct: 338 GDGKLVKVYQSGWLPRPETFKPISPPSLPLDTTVSVLIDEDQCWRDDVIRQHFHQEDAAQ 397 Query: 1226 ILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRHIEKWWNFIWSLN 1047 IL+IPL S D W ++ KG YSV+ GY++A+ SS+ WN IW L Sbjct: 398 ILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDNNSWNSIWYLQ 457 Query: 1046 IPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMRSFWKH 867 IP K F WR ++D LP NL + C+ C +++ HS+F C R WK Sbjct: 458 IPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKL 517 Query: 866 QLFYHFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQKMIHSNEKPHALKM 687 F +K+ + L L L + + SKTE E+ A+ W W R I N+K Sbjct: 518 TTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIWHSRNLFIFQNKKEDFQLS 577 Query: 686 TVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVDASFNSDKGIFSVGG 507 + Y+ + Q+ + S W+CPP G +++VDA+ + +G Sbjct: 578 VAGAEAIVQSYKRIQMPQLQAFSNQDLVSHKHWKCPPAGWFKVNVDAAIKLENQRVGLGI 637 Query: 506 IIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHFISSDSLLSVQAVT 327 +IRNS G + + + E A GL +++ A P + +DS V+ Sbjct: 638 VIRNSEGKFITAAIKPSKWLDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKEVTDLVS 697 Query: 326 NDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKIS 198 K + VS ++ + + K+ H R+ N AH ++ Sbjct: 698 ARKSTKAEIFWIVSEVQDTMKRLKHVKIQHSPRTCNGFAHTLA 740 >ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis] Length = 1160 Score = 231 bits (588), Expect = 9e-58 Identities = 138/469 (29%), Positives = 226/469 (48%), Gaps = 4/469 (0%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ WRI Q PDSLV +VL+ RY +FL+A +G+NPS+IWRS+ W + ++ G W++ Sbjct: 637 AKQGWRIQQCPDSLVARVLQARYFHSSNFLNAKIGSNPSYIWRSILWGRQIICGGSRWRI 696 Query: 1403 GNDKSIRIFQDNWLPSWRDPIP-QSICRGRLPSR--VSELICN-NSWNESLILSVFPPCV 1236 GN + + I + NW+P P + + + +PS VSELI N W+E LI F Sbjct: 697 GNGQDVHIHKANWIPK---PFTFKPVIKPTMPSEALVSELINGENCWDEELIYKHFDKMD 753 Query: 1235 ANEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRHIEKWWNFIW 1056 A+ I +IPL ED W F G Y+V+ GY+ A+ SS + WN IW Sbjct: 754 ADVITQIPLPRRLREDELIWHFGKSGQYTVKSGYQRALKIRFPAMPSSSESSKNEWNIIW 813 Query: 1055 SLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMRSF 876 SL +P K F WR + + LP+ NL + C+LC G +++ H++ C + Sbjct: 814 SLALPKKIRIFVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKV 873 Query: 875 WKHQLFYHFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQKMIHSNEKPHA 696 W+ LFY +++A L L ++ S + ++FA M W W R + + ++ + Sbjct: 874 WRLSLFYIDIQAAPGQDILSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFKGKRENP 933 Query: 695 LKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVDASFNSDKGIFS 516 + + + Y+ + V + + W P G ++++ DA+ NS+K + Sbjct: 934 QSVVAKAEAVMEAYKRVQPSADVSHGKQQKVAQLGWNPPQEGFVKINTDAATNSEKNLAG 993 Query: 515 VGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHFISSDSLLSVQ 336 +G +IR+ +G + S+ E A+ GL +++ A++ + SDS V Sbjct: 994 LGAVIRDENGQVTATAIKVSKFHGSVAYAEAEAMEWGLQVAKDAHVKDVIMESDSQEVVS 1053 Query: 335 AVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFA 189 V N + + V I+ L + +RS NA AH + A Sbjct: 1054 LVNNRQGSRSEIYWVVLEIQKLKESFDHVSCVYTHRSCNAIAHSLVKIA 1102 >ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis] Length = 589 Score = 229 bits (583), Expect = 3e-57 Identities = 145/470 (30%), Positives = 224/470 (47%), Gaps = 9/470 (1%) Frame = -3 Query: 1571 WRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKVGNDK 1392 WR+IQ+PDSLV KVLK +Y K DFL A +G+NPS+IWRS+ W + +L K + W++GN + Sbjct: 103 WRLIQNPDSLVAKVLKAKYYKQTDFLKAKIGSNPSYIWRSIVWGRHVLQKWIRWRIGNGE 162 Query: 1391 SIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELICNN-SWNESLILSVFPPCVANEILRI 1215 I+I NW+P P + S+VSEL+ N WNE +I F A I I Sbjct: 163 KIQIHSSNWIPKPSTFKPILVQSLPTESKVSELLDQNLQWNEIMINQNFAKEDAEIIRNI 222 Query: 1214 PLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRHIEKWWNFIWSLNIPSK 1035 PL ED W +N KGIYSV+ GY++A+ + S + W IW LN+P K Sbjct: 223 PLPRTPQEDMVIWHYNKKGIYSVKSGYQLALKIKFSESPAGSTGAPQGWQHIWRLNLPEK 282 Query: 1034 AHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMRSFWKHQLFY 855 F W+ + + LP NL V C LC G + + H++ C V R WK Sbjct: 283 IKIFVWKATKNLLPMAENLWRRKVLKEPTCHLCKAGCEDVFHALMECRVARKIWKCTHLE 342 Query: 854 HFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQKMIHSNEKPHALKMTVET 675 + +KS L + + N +K+E + A + W+ W R K++ +K + + Sbjct: 343 NEVKSVIREDMLSVMIGAMNNWAKSEVDYVATIWWVAWHARNKLLFQGKKLDPIGSVAKG 402 Query: 674 SNFIHKYQSARKLQMVKGHLEHGESPSK----WRCPPTGKLRLDVDASFNSDKGIFSVGG 507 + YQ+ Q VK H + W PP K++++VDA+ D+ +G Sbjct: 403 KTVMEVYQA----QQVKERESHRNTVKGKMQIWTPPPNNKVKVNVDAAVKEDRKSAGLGV 458 Query: 506 IIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHFISSD----SLLSV 339 +IRN G L + +I E A+ G+ +++ ++S I +D + L+ Sbjct: 459 VIRNHRGQVLAAAVKSMNFQGNIAIAEAHAVKWGMEVAKDLSLSSVIIETDCKNVADLAN 518 Query: 338 QAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFA 189 + V+N E+ M + + + S HV R N AH ++ A Sbjct: 519 KKVSNRTEILWTMSDIHKSTQDFQLIS----FQHVPRKCNDFAHFLAKRA 564 >ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis] Length = 2303 Score = 228 bits (580), Expect = 7e-57 Identities = 137/474 (28%), Positives = 224/474 (47%), Gaps = 1/474 (0%) Frame = -3 Query: 1607 ITHHRIHKAKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLL 1428 I+ ++ AKQ WR+IQ P+SLV KVL+ RY K FLDA G+NPS IWRS+ W + ++ Sbjct: 836 ISFNQAMVAKQGWRLIQFPNSLVSKVLRARYFKSCSFLDAKPGSNPSFIWRSILWGRQVI 895 Query: 1427 FKGLCWKVGNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELICN-NSWNESLILSV 1251 KG W++GN +I +++DNW+P P S + + V EL+ + N+WN + + Sbjct: 896 QKGARWRIGNGSNILVYKDNWIPRPDTFKPISPPTLPIDTTVGELMDDENNWNVAKLNQH 955 Query: 1250 FPPCVANEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRHIEKW 1071 F IL+IPL Q D W ++ G YSV+ GY++A+ +S K Sbjct: 956 FMQEDTEAILKIPLPRSQKVDEMMWHYDKHGEYSVKSGYQIALKLKAPDEPSNSGSNSKR 1015 Query: 1070 WNFIWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCP 891 W +WS+ +P K F WR + + LP NL +C+ CN +++ H++ C Sbjct: 1016 WKAVWSMELPEKMKIFMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCK 1075 Query: 890 VMRSFWKHQLFYHFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQKMIHSN 711 R W H + +A+ L+ + + KT+ E A W W R K I Sbjct: 1076 AARKIWYHATSSVQISNAQNQDILEFIYEVWSTWGKTKAEQTIAFCWAIWFARNKRIFEG 1135 Query: 710 EKPHALKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVDASFNSD 531 +K + + + Y ARK H KW PP L+++VDA+ N+ Sbjct: 1136 KKSDPRASAAKAESLLEAYHRARKPDASHIHNVKRIVQKKWEPPPGNFLKVNVDAAINNR 1195 Query: 530 KGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHFISSDS 351 + +G +I++ SG + ++ P + E A+ GL I++ ++S + +D Sbjct: 1196 DQVAGLGAVIKDPSGKIVAAGTKQVPLREGVSFAEAEAMEWGLQIARELSLSALIMETDC 1255 Query: 350 LLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFA 189 V + N + + +S I+ + K H+ R+ N CAH ++ A Sbjct: 1256 KEVVDLLNNTKGSRTGISWVISDIQEQRRDFKEVKFRHIPRTCNTCAHSLAKLA 1309 >gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica] Length = 1060 Score = 224 bits (572), Expect = 6e-56 Identities = 146/499 (29%), Positives = 237/499 (47%), Gaps = 6/499 (1%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ WRI+++P+SLV ++ + RY + FL+A +G NPS IWRSL W K+LL KGL W+V Sbjct: 570 AKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRV 629 Query: 1403 GNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELICNN-SWNESLILSVFPPCVANE 1227 G+ SI+++ D WLP+ S + L +RV +L ++ WN L+ +F + Sbjct: 630 GSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDA 689 Query: 1226 ILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRHIE---KWWNFIW 1056 IL+IPL SL D W + G+YSV+ GYR+A D + S ++ K+W IW Sbjct: 690 ILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVDLNSKFWKKIW 749 Query: 1055 SLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMRSF 876 +L IP+K FF WR + DFLP L + +C C+ +S+LH+V+ C + Sbjct: 750 ALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEV 809 Query: 875 WKHQLFYHFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQKMIHSNEKPHA 696 W++ + + + R +L ++ S E +FA + W W R I + A Sbjct: 810 WRNSAWGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETA 869 Query: 695 LKMTVETSNFIHKYQSARK-LQMVKGHLEHGESPSK-WRCPPTGKLRLDVDASFNSDKGI 522 +++ + ++ A L + G ++P + WR PP K S + Sbjct: 870 IQLLSRMTKLAQEFSDANNILHTIHGRQSSPQAPLQGWRPPPAVK----------SGDSV 919 Query: 521 FSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHFISSDSLLS 342 VG ++RN++G + RR + + EL A +EGL + + + D+ Sbjct: 920 RGVGVVVRNANGEFMAACVRRIHASYGARQTELMATIEGLRFAIDMGFTDAILEMDAQDC 979 Query: 341 VQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFASYSPTPFVC 162 + ++ + E G + + LL R N AH ++ FA + FV Sbjct: 980 LNSIFSTEEYNGIDGPLLEEVNYLLNNFRAVVCHWTPRCGNKVAHTLAQFA-FHCNEFVT 1038 Query: 161 EAGEFPQWLKELVLQDLPS 105 E P WL ++ D+ S Sbjct: 1039 WIEEAPSWLLPVLEADVLS 1057 >gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa] Length = 1747 Score = 213 bits (541), Expect = 2e-52 Identities = 145/512 (28%), Positives = 234/512 (45%), Gaps = 23/512 (4%) Frame = -3 Query: 1580 KQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKVG 1401 KQ WR++ PDSLV ++LK +Y DF++A LG++PS++WRS W ++LL KG+ W++G Sbjct: 1155 KQGWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYLWRSFLWGRELLRKGVRWRIG 1214 Query: 1400 NDKSIRIFQDNW---LPSWRDPIPQSICRGRLPSRVSELICNN-SWNESLILSVFPPCVA 1233 + K +R+F D W LPS+R + Q L RVS+L+ NN WN + F Sbjct: 1215 DGKEVRVFIDPWVPGLPSFRPILRQG---APLFLRVSDLLHNNGGWNMEALNYWFTDDEC 1271 Query: 1232 NEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRH--------IE 1077 I I + + + D W + G Y+V+ GY +A C+ +R Sbjct: 1272 EAISSITVGATRRPDVYMWNYCKNGRYTVKSGYWLA--------CEENREEAINIVLAPR 1323 Query: 1076 KWWNFIWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFF 897 +W +W L +P K + F WR S F+P L ++ C C G +S +H+ + Sbjct: 1324 NFWKHLWKLKLPPKINHFLWRCSMGFIPCMEVLLWKHIAHSASCFRCQQGRESPVHATWG 1383 Query: 896 CPVMRSFWKHQLFYHFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQKMIH 717 C + ++ FY L S + + L + L K E ++FA + WL W ER H Sbjct: 1384 CSCCVAVFERAGFYSKLSSGQFPSFIHLLHHAFSTLDKEELQLFAVLLWLNWHERNNCYH 1443 Query: 716 SNEKPHALKMTVETSNFIHKYQSARKL----------QMVKGHLEHGESPSKWRCPPTGK 567 + + F+ ++ A ++V G L +W+ P +G+ Sbjct: 1444 KGAVVPSDIIYENGVKFLKCFKEALGCRAGVEVKAVEEVVPGSLR------RWQAPSSGQ 1497 Query: 566 LRLDVDASFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQR 387 L+++ D + N F G IIR+ G+ ++ G+ F H S L EL AI GL + Sbjct: 1498 LKVNCDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQHPVSSLVAELLAIKVGLDLVVE 1557 Query: 386 ANMSPHFISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAH 207 + + SD L ++ + + V I+ + S ++HV R N AH Sbjct: 1558 RRLRNIMVESDCLEAIHLLNSKERCLAPEGGLVEDIQNTMALVNISSIYHVRREGNTAAH 1617 Query: 206 KISSFASYSPTPFV-CEAGEFPQWLKELVLQD 114 I+ F + + +V E G P WL L+ D Sbjct: 1618 AIAKFVARNNGRYVWLEDG--PDWLMSLICHD 1647 >ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 1152 Score = 212 bits (540), Expect = 3e-52 Identities = 150/503 (29%), Positives = 243/503 (48%), Gaps = 12/503 (2%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ WR++ P SL+ +VLK +Y + A +G S+ WRSL K+LL +GL ++V Sbjct: 625 AKQGWRMLCRPQSLLAQVLKMKYFPTSSLIQAEVGKRISYSWRSLMRGKELLQQGLRFQV 684 Query: 1403 GNDKSIRIFQDNWLPSWRDPIPQSI-CRGRLPSRVSELICNNS--WNESLILSVFPPCVA 1233 GN ++I ++ D WLP P S+ G RV ELI + WNE L+ +F P + Sbjct: 685 GNGENIHLWDDPWLPLPYTFKPFSLPMHGSEGMRVCELIEEGTGGWNEWLLEELFTPMES 744 Query: 1232 NEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGY---RMAIGFF-DAPGCQSSRHIEKWWN 1065 IL+IPL ED W F++KG Y+V+ GY R+ G A G S + W Sbjct: 745 EIILKIPLSLNGGEDRLVWHFDNKGCYNVKSGYFVGRLLDGLNRKASGSDSDVQWSRLWC 804 Query: 1064 FIWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGV-CKLCNFGTDSLLHSVFFCPV 888 +W +P K WRL LP+ A L V + V C C+ + LH C Sbjct: 805 KLWRTQVPPKVRMHAWRLVKGTLPSRAALVKKQVQLPDVNCVFCSTNVEDSLHLFKNCEA 864 Query: 887 MRSFWKHQLFYHFLKSAREGCTLDLCLW-MRNCLSKTEFEIFAAMSWLCWKERQKMIHSN 711 ++ FW+ Q ++++ W M LS + E F W+ W ER M+ Sbjct: 865 LQPFWQ-QGMVQIHPRTHPSISVEVWFWDMVEMLSGEKLEGFLMALWVIWVERNNMVWRG 923 Query: 710 EKPHALKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVDASFNSD 531 + + M +S+ + +Y+ + + ++ SKW CPP+G+LR+++D SF + Sbjct: 924 QFYNITNMMDWSSSLLLEYKHCHQRSVGT----RKKNKSKWTCPPSGRLRVNIDGSFAHE 979 Query: 530 KGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHFISSDS 351 +G VG +IR+ G + R FP+A S + +E+ A+ GL++ + + SD Sbjct: 980 EGRGGVGVVIRDHKGACVASLARPFPNAASAIHMEVEALRAGLLVCVQQGWRDVEVESDC 1039 Query: 350 LLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFA---SYS 180 + VQA+ DGE + + + + ++ HV R AN+ A++++ FA SY Sbjct: 1040 MNLVQAMQTDGEDFSMVGRIIEDCQRYVSAFNFFQLQHVCREANSVANRLAHFARCNSYD 1099 Query: 179 PTPFVCEAGEFPQWLKELVLQDL 111 E P +++++ +DL Sbjct: 1100 D----FSLDETPAIIQDVLYEDL 1118 >ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis] Length = 1570 Score = 205 bits (521), Expect = 5e-50 Identities = 136/443 (30%), Positives = 222/443 (50%), Gaps = 8/443 (1%) Frame = -3 Query: 1520 RYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKVGNDKSIRIFQDNWLPSWRDPI 1341 RY +H DF++A LG+NPS IWRS+ W + ++ KG W++GN +SI + ++NWLP R Sbjct: 802 RYFQHKDFMNARLGSNPSFIWRSILWGRQVISKGSRWRIGNGQSIMLHKENWLP--RPLT 859 Query: 1340 PQSICRGRLPSR--VSELICN-NSWNESLILSVFPPCVANEILRIPLLSLQSEDSRFWRF 1170 + I + LP+ V+ELI ++WNE LI F A I+RI L +D W + Sbjct: 860 FKPISKPSLPADALVAELINEEHTWNEGLIHRHFAKIDAEAIVRILLPRRPMKDEVIWHY 919 Query: 1169 NSKGIYSVRDGYRMAIGFFDAPGCQSSRHIEKWWNFIWSLNIPSKAHFFWWRLSHDFLPA 990 + K YSV+ GY++A+ SS E WN IW L +P K F WR + + LP+ Sbjct: 920 DRKCQYSVKSGYQIALNLKFPAKPTSSATSENQWNAIWLLTLPEKIRIFAWRAAKNLLPS 979 Query: 989 EANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMRSFWKHQLFYHFLKSAREGCTLDLC 810 NL V +C+ CN +++ H++ C V++ WK F LK + E L L Sbjct: 980 AENLWKRKVIQEPLCQFCNKKLETIFHALVGCKVVKKIWKITRFEDDLKDSVEQDMLSLL 1039 Query: 809 LWMRNCLSKTEFEIFAAMSWLCWKERQKMIHSNEK--PHALKMTVETSNFIHKYQSARKL 636 + ++ SK + E+ + W+ W + I K PH +TV + + ++ R+ Sbjct: 1040 IELKLRRSKDDIELLVTILWMIWNAQNSWIFKGVKDSPH---VTVSKAEAV--LEAFRRT 1094 Query: 635 QMVKGHLEHGESPSK---WRCPPTGKLRLDVDASFNSDKGIFSVGGIIRNSSGNPLLVFG 465 Q+ +S SK W+ P G +++VDA+ NS+K I S+G +IR+ +GN + Sbjct: 1095 QLPAATHIDIQSSSKLKAWKPPQRGHFKVNVDAATNSEKQIASLGAVIRDEAGNVIAAAV 1154 Query: 464 RRFPHATSILELELRAIMEGLVISQRANMSPHFISSDSLLSVQAVTNDGEVKGYMESWVS 285 + + E AI GL ++ A + SD+ V+ V N + + +S Sbjct: 1155 KVSKFYGDVFIAEAEAIEWGLRLAGNACTESLIVESDAQEVVKLVNNSQGCRSEIFWIIS 1214 Query: 284 TIKGLLVQSPDSKVFHVYRSANA 216 ++ +L V + +RS++A Sbjct: 1215 EVQRVLKSFSSVCVQYTHRSSSA 1237 >ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis] Length = 1452 Score = 204 bits (519), Expect = 9e-50 Identities = 134/495 (27%), Positives = 226/495 (45%), Gaps = 15/495 (3%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ WR+++ P+SL+ +V+K RY K+ F +A +G+NPS IWRS+ W ++ KG+ W++ Sbjct: 961 AKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRI 1020 Query: 1403 GNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSR--VSELI-CNNSWNESLILSVFPPCVA 1233 G+ K + +++D W+P R Q I LP V++LI N W + F Sbjct: 1021 GDGKKVLVYKDKWIP--RPATFQPISPKTLPHETVVADLIDSENKWRVDRLEQHFMKEDI 1078 Query: 1232 NEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRHIEKWWNFIWS 1053 IL+I L S + ED W F+ KG YSV+ GY++A+ +SS + W W Sbjct: 1079 EAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRLWKIPWM 1138 Query: 1052 LNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMRSFW 873 L++P K F WR + LP NL +C+ C +++ H + C R W Sbjct: 1139 LDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIW 1198 Query: 872 ------------KHQLFYHFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQ 729 +Q F+ ++ +W R+ S E E+ W+ W R Sbjct: 1199 DLAPLIVQPSKDHNQDFFSAIQE----------MWSRS--STAEAELMIVYCWVIWSARN 1246 Query: 728 KMIHSNEKPHALKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVD 549 K I +K + + + + + YQ K V G + G KW+ P L+L+VD Sbjct: 1247 KFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVD 1306 Query: 548 ASFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPH 369 A+ ++ +G I+R++ G L V ++ + E AI GL ++ + + S Sbjct: 1307 AAVSTKDQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWGLQVANQISSSSL 1366 Query: 368 FISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFA 189 + SD V+ + N + + +S ++ + + + R+ N AH ++ FA Sbjct: 1367 IVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKEFKQVQFSFIPRTCNTYAHALAKFA 1426 Query: 188 SYSPTPFVCEAGEFP 144 + + V G FP Sbjct: 1427 LRNSSTDVW-VGTFP 1440 >ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis] Length = 765 Score = 203 bits (517), Expect = 1e-49 Identities = 134/495 (27%), Positives = 225/495 (45%), Gaps = 15/495 (3%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ WR+++ P+SL+ +V+K RY K+ F +A +G+NPS IWRS+ W ++ KG+ W++ Sbjct: 274 AKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRI 333 Query: 1403 GNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSR--VSELI-CNNSWNESLILSVFPPCVA 1233 G+ K + +++D W+P R Q I LP V++LI N W + F Sbjct: 334 GDGKKVLVYKDKWIP--RPATFQPISPKTLPHETVVADLIDSENKWRVDRLEQHFMKEDI 391 Query: 1232 NEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRHIEKWWNFIWS 1053 IL+I L S + ED W F+ KG YSV+ GY++A+ +SS + W W Sbjct: 392 EAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRLWKIPWM 451 Query: 1052 LNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMRSFW 873 L++P K F WR + LP NL +C+ C +++ H + C R W Sbjct: 452 LDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIW 511 Query: 872 ------------KHQLFYHFLKSAREGCTLDLCLWMRNCLSKTEFEIFAAMSWLCWKERQ 729 +Q F+ ++ +W R+ S E E+ W+ W R Sbjct: 512 DLAPLIVQPSKDHNQDFFSAIQE----------MWSRS--STAEAELMIVYCWVIWSARN 559 Query: 728 KMIHSNEKPHALKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVD 549 K I +K + + + + + YQ K V G + G KW+ P L+L+VD Sbjct: 560 KFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVD 619 Query: 548 ASFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPH 369 A+ ++ +G I+R++ G L V ++ + E AI GL ++ + + S Sbjct: 620 AAVSTKXQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWGLQVANQISSSSL 679 Query: 368 FISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFA 189 + SD V+ + N + + +S ++ + + R+ N AH ++ FA Sbjct: 680 IVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKDFKQVQFSFIPRTCNTYAHALAKFA 739 Query: 188 SYSPTPFVCEAGEFP 144 + + V G FP Sbjct: 740 LRNSSTDVW-VGTFP 753 >gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group] gi|31433076|gb|AAP54636.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 791 Score = 197 bits (501), Expect = 1e-47 Identities = 145/495 (29%), Positives = 224/495 (45%), Gaps = 30/495 (6%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 A+Q WR+I PDSL +VLK +Y H +D G+N S WRS+ + DLL KG+ W+V Sbjct: 277 ARQAWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRV 336 Query: 1403 GNDKSIRIFQDNWLP---SWRDPIPQSICRGRLPSRVSELIC-NNSWNESLILSVFPPCV 1236 GN SIRI++D WLP S R ++ CR + VS+LI + SW+ I F Sbjct: 337 GNGNSIRIWRDPWLPRDHSRRPITGKANCRLKW---VSDLITEDGSWDVPKIHQYFHNLD 393 Query: 1235 ANEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSS--RHIEKWWNF 1062 A IL I + S ED W + G++SVR YR+A + SS +I K W Sbjct: 394 AEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEM 453 Query: 1061 IWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMR 882 IW +P K F WR++ + L N + + +C++C+ + H++ C Sbjct: 454 IWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDRENEDDAHALCRCIQAS 513 Query: 881 SFWKHQLFYHFLKSAREGCTLDLCLWMRNCLSK-TEFE--IFAAMSWLCWKERQKMIHSN 711 W + + L W+ +CL K E+E +F W W R ++IH Sbjct: 514 QLWSCMHKSGSVSVDIKASVLGR-FWLFDCLEKIPEYEQAMFLMTLWRNWYVRNELIHGK 572 Query: 710 EKPHALKMTVETSNFIHKY-------QSARKLQMVKGHLEHGESPSK------------- 591 P T + FI Y + A + +VKG P K Sbjct: 573 SAP----PTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLNNHQP 628 Query: 590 -WRCPPTGKLRLDVDASFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAI 414 W P G ++L+VD SF++ G +G I+RNS+G+ + + + LE ELRA Sbjct: 629 CWERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRAC 688 Query: 413 MEGLVISQRANMSPHFISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHV 234 +EGL ++ + P + +D VQ + G + + + + LLV + + Sbjct: 689 VEGLKLAIHWTLLPIQVETDCASVVQLLQGTGRDFSVLANIIHEARHLLVGERVISIKKI 748 Query: 233 YRSANACAHKISSFA 189 RS N +H +++ A Sbjct: 749 CRSQNCISHHLANTA 763 >gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa Japonica Group] Length = 1382 Score = 196 bits (498), Expect = 2e-47 Identities = 132/511 (25%), Positives = 229/511 (44%), Gaps = 13/511 (2%) Frame = -3 Query: 1604 THHRIHKAKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLF 1425 T ++ +Q WR++ PDSL +VLKGRY + F +A +PS WRSL + ++LL Sbjct: 875 TFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLA 934 Query: 1424 KGLCWKVGNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELICNNS--WNESLILSV 1251 KG+ W VG+ K+I+IF DNW+P +R + ++ + VS L+ ++ W+ LI S+ Sbjct: 935 KGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSL 994 Query: 1250 FPPCVANEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIG-FFDAPGCQSSRHI-- 1080 FP +A EIL+IP+ D W + G+YSVR Y +A F A S R + Sbjct: 995 FPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMAS 1054 Query: 1079 -----EKWWNFIWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSL 915 +K W +W +N P K WR +H+ L LR ++P C CN D++ Sbjct: 1055 RLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCN-RDDTV 1113 Query: 914 LHSVFFCPVMRSFWKHQLFYHFLKSAREGCTLDLCLWMRNCLSKTEFE---IFAAMSWLC 744 H FCP W+ +K R G + + W+ + L + + A W Sbjct: 1114 EHVFLFCPFAAQIWEEIKGKCAVKLGRNGFS-TMRQWIFDFLKRGSSHANTLLAVTFWHI 1172 Query: 743 WKERQKMIHSNEKPHALKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKL 564 W+ R ++N H ++ ++ +++ + + ++ +W+ PP Sbjct: 1173 WEARNNTKNNNGTVHPQRVVIKILSYVDMILKHNTKTVDGQRGGNTQAIPRWQPPPASVW 1232 Query: 563 RLDVDASFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRA 384 ++ DA+ S VG +IR+++G L+ E AI L +++ Sbjct: 1233 MINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEE 1292 Query: 383 NMSPHFISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHK 204 + ++SD L ++ + G + + + IK L HV R +N AH Sbjct: 1293 GLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHS 1352 Query: 203 ISSFASYSPTPFVCEAGEFPQWLKELVLQDL 111 ++ A S P ++++++ D+ Sbjct: 1353 LARNAELSTC--TVYRSVIPDYIRDILCDDV 1381 >gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical protein OsJ_32156 [Oryza sativa Japonica Group] Length = 1339 Score = 196 bits (498), Expect = 2e-47 Identities = 132/511 (25%), Positives = 229/511 (44%), Gaps = 13/511 (2%) Frame = -3 Query: 1604 THHRIHKAKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLF 1425 T ++ +Q WR++ PDSL +VLKGRY + F +A +PS WRSL + ++LL Sbjct: 832 TFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLA 891 Query: 1424 KGLCWKVGNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELICNNS--WNESLILSV 1251 KG+ W VG+ K+I+IF DNW+P +R + ++ + VS L+ ++ W+ LI S+ Sbjct: 892 KGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSL 951 Query: 1250 FPPCVANEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIG-FFDAPGCQSSRHI-- 1080 FP +A EIL+IP+ D W + G+YSVR Y +A F A S R + Sbjct: 952 FPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMAS 1011 Query: 1079 -----EKWWNFIWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSL 915 +K W +W +N P K WR +H+ L LR ++P C CN D++ Sbjct: 1012 RLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCN-RDDTV 1070 Query: 914 LHSVFFCPVMRSFWKHQLFYHFLKSAREGCTLDLCLWMRNCLSKTEFE---IFAAMSWLC 744 H FCP W+ +K R G + + W+ + L + + A W Sbjct: 1071 EHVFLFCPFAAQIWEEIKGKCAVKLGRNGFS-TMRQWIFDFLKRGSSHANTLLAVTFWHI 1129 Query: 743 WKERQKMIHSNEKPHALKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKL 564 W+ R ++N H ++ ++ +++ + + ++ +W+ PP Sbjct: 1130 WEARNNTKNNNGTVHPQRVVIKILSYVDMILKHNTKTVDGQRGGNTQAIPRWQPPPASVW 1189 Query: 563 RLDVDASFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRA 384 ++ DA+ S VG +IR+++G L+ E AI L +++ Sbjct: 1190 MINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEE 1249 Query: 383 NMSPHFISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHK 204 + ++SD L ++ + G + + + IK L HV R +N AH Sbjct: 1250 GLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHS 1309 Query: 203 ISSFASYSPTPFVCEAGEFPQWLKELVLQDL 111 ++ A S P ++++++ D+ Sbjct: 1310 LARNAELSTC--TVYRSVIPDYIRDILCDDV 1338 >gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica] Length = 992 Score = 192 bits (489), Expect = 3e-46 Identities = 130/478 (27%), Positives = 221/478 (46%), Gaps = 13/478 (2%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ WR++Q+PDSLV KVLK +Y FL+ + S +W+SL ++ ++ +G W+V Sbjct: 512 AKQGWRLLQNPDSLVTKVLKAKYFPTRSFLETTVSPYASVVWKSLCDARTVIIQGSRWQV 571 Query: 1403 GNDKSIRIFQDNWLPSWR-----DPIPQSICRGRLPSRVSELICNNS--WNESLILSVFP 1245 G+ +I I++D WLP P P+ ++VS+LI +S WN L+ +VF Sbjct: 572 GSGDTIGIWEDRWLPQPNSFQIFSPRPEH----SAITKVSDLIHGDSREWNAPLLQNVFF 627 Query: 1244 PCVANEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSSRH---IEK 1074 P I IPL + D W ++ KG+++V+ Y +A + G SS + + + Sbjct: 628 PEEVMLIRSIPLSLRLTPDMLVWHYDKKGMFTVKSAYHVARSLHSSTGRASSSNSDAVAR 687 Query: 1073 WWNFIWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFC 894 W+ +W +P++ FWWR+ LP +ANL V + C LC SL+H + C Sbjct: 688 NWSLLWKAIVPARVKTFWWRVISGILPTKANLARKKVSLDEECMLCEGPVKSLIHILRDC 747 Query: 893 PVMRSFWKHQLFYHFLKSAREGCTLDLCLWMRNC---LSKTEFEIFAAMSWLCWKERQKM 723 P W + H K W+ C LS +F F + W W+ R + Sbjct: 748 P-----WNNGA--HSPKD-----------WVCRCAEQLSSQDFATFLMVGWAIWEARNGL 789 Query: 722 IHSNEKPHALKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVDAS 543 + +N+K ++++ S +H + R + G+ W+ P L+++VD + Sbjct: 790 LWNNKKSRHEQVSLHASLRLHDF--LRVSNCLGSQSRQGQIKQMWQPPHENSLKINVDGA 847 Query: 542 FNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHFI 363 + VG ++R+S+G + + + S ++E A +++ Sbjct: 848 WKPGTTEGGVGVVVRDSTGKFVAGCATKLTNVFSAPQVEALAARTNTILAMERGYQNVVF 907 Query: 362 SSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKISSFA 189 SD+L V A+ N + + V K LL Q H+ R+AN AH+++ FA Sbjct: 908 ESDALQIVTALRNHSIDRSVIGPVVEDTKSLLTQITGEGFTHIRRTANGVAHRLARFA 965 >gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] Length = 1378 Score = 190 bits (482), Expect = 2e-45 Identities = 131/486 (26%), Positives = 214/486 (44%), Gaps = 15/486 (3%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ+WR++ PDSL +VL+ RY + L+A + + S+ W+S+ +G W+V Sbjct: 331 AKQVWRLLSDPDSLCARVLRARYYRDGKLLNARMKSGSSYTWQSILAGLQCFKQGYIWRV 390 Query: 1403 GNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELI--CNNSWNESLILSVFPPCVAN 1230 G+ I+I++DNW+P + Q+ L + V ELI N +W L+ ++F P Sbjct: 391 GDGTQIKIWEDNWIPGSHNMKIQTNRGNNLVATVDELIDPINFTWGGDLLKTIFWPIDVC 450 Query: 1229 EILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYR----MAIGFFDAPGCQSSRHIEKWWNF 1062 I++IP+ + +D W++N G +SV+ Y G A S+ + W Sbjct: 451 RIMQIPIRA-GRDDLVAWQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTASRSRLWKR 509 Query: 1061 IWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMR 882 +W+L +P+K F WR +P A L +V G C +C G + + H +F C + Sbjct: 510 LWNLKVPAKIKIFGWRALKGLVPCRAILANRHVGDSGGCPVCQNGPEDIKHMIFTCARAK 569 Query: 881 SFWK----HQLFYHFLKSAREGCTLDLCLWMR----NCLSKTEFEIFAAMSWLCWKERQK 726 W + R G + + +R L E+ +W W ER++ Sbjct: 570 QVWNSLGVEDRIQRLCMTERSGSVILEEILIREDQVQDLQVGFAELVITAAWYIWWERRQ 629 Query: 725 MIHSNEKPHALKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVDA 546 ++H + + + Y+ A K V L G W+ PP GK+ ++VDA Sbjct: 630 LVHGEAVQRPARSGMAIAALTKNYKLATKKDSV---LRQG-----WKKPPEGKVMVNVDA 681 Query: 545 SFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHF 366 F+ G +VG +IR+ SG L PH E A+ EGL+++Q+ + Sbjct: 682 GFDEMGGCGTVGSVIRDCSGGVLAAAHSFVPHLVDAPMAEAFALKEGLMLAQQIGCNRLI 741 Query: 365 ISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACA-HKISSFA 189 I SD + VQ +T+ G + L D + H R AN C H + S Sbjct: 742 IQSDCMEVVQIMTDGGFTANSAAAIYEDCNILWSGFADITIEHCSREANQCTDHILVSSQ 801 Query: 188 SYSPTP 171 +Y P Sbjct: 802 TYKHNP 807 >ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] gi|108862221|gb|ABA96496.2| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza sativa Japonica Group] Length = 1764 Score = 190 bits (482), Expect = 2e-45 Identities = 149/506 (29%), Positives = 230/506 (45%), Gaps = 35/506 (6%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 A+Q WR+I PDSL +VLK +Y H +D G+N S WRS+ + DLL KG+ W+V Sbjct: 998 ARQAWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRV 1057 Query: 1403 GNDKSIRIFQDNWLP---SWRDPIPQSICRGRLPSRVSELIC-NNSWNESLILSVFPPCV 1236 GN SIRI++D+WLP S R ++ CR + VS+LI + SW+ I F Sbjct: 1058 GNGNSIRIWRDSWLPRDHSRRPITGKANCRLKW---VSDLITEDGSWDVPKIHQYFHNLD 1114 Query: 1235 ANEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSS--RHIEKWWNF 1062 A IL I + S ED W + G++SVR YR+A + SS +I K W Sbjct: 1115 AEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEM 1174 Query: 1061 IWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMR 882 IW +P K F WR++ + L N + + +C++C+ + H++ C Sbjct: 1175 IWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDRENEDDAHALCRCIQAS 1234 Query: 881 SFWKHQLFYHFLKSAREGCTLDLCLWMRNCLSK-TEFE--IFAAMSWLCWKERQKMIHSN 711 W + + L W+ +CL K E+E +F W W R ++IH Sbjct: 1235 QLWSCMHKSGSVSVDIKASVLGR-FWLFDCLEKIPEYEQAMFLMTLWRNWYVRNELIHGK 1293 Query: 710 EKPHALKMTVETSNFIHKY-------QSARKLQMVKGHLEHGESPSK------------- 591 P T + FI Y + A + +VKG P K Sbjct: 1294 SAP----PTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLNNHQP 1349 Query: 590 -WRCPPTGKLRLDVDASFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAI 414 W P G ++L+VD SF++ G +G I+RNS+G+ + + + LE ELRA Sbjct: 1350 CWERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRAC 1409 Query: 413 MEGLVISQRANMSPHFISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSP---DSKV 243 +EGL ++ + P + +D VQ + G + + + + LL Q+P ++KV Sbjct: 1410 VEGLKLAIHWTLLPIQVETDCASVVQLLQGIGRDFSVLANIIHEARHLL-QTPSRTNTKV 1468 Query: 242 FHVYRS--ANACAHKISSFASYSPTP 171 ++ NA AH + + P P Sbjct: 1469 TTQKQTLRPNATAHCMPTDRPTEPGP 1494 >gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group] Length = 2367 Score = 190 bits (482), Expect = 2e-45 Identities = 149/506 (29%), Positives = 230/506 (45%), Gaps = 35/506 (6%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 A+Q WR+I PDSL +VLK +Y H +D G+N S WRS+ + DLL KG+ W+V Sbjct: 1601 ARQAWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRV 1660 Query: 1403 GNDKSIRIFQDNWLP---SWRDPIPQSICRGRLPSRVSELIC-NNSWNESLILSVFPPCV 1236 GN SIRI++D+WLP S R ++ CR + VS+LI + SW+ I F Sbjct: 1661 GNGNSIRIWRDSWLPRDHSRRPITGKANCRLKW---VSDLITEDGSWDVPKIHQYFHNLD 1717 Query: 1235 ANEILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYRMAIGFFDAPGCQSS--RHIEKWWNF 1062 A IL I + S ED W + G++SVR YR+A + SS +I K W Sbjct: 1718 AEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEM 1777 Query: 1061 IWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMR 882 IW +P K F WR++ + L N + + +C++C+ + H++ C Sbjct: 1778 IWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDRENEDDAHALCRCIQAS 1837 Query: 881 SFWKHQLFYHFLKSAREGCTLDLCLWMRNCLSK-TEFE--IFAAMSWLCWKERQKMIHSN 711 W + + L W+ +CL K E+E +F W W R ++IH Sbjct: 1838 QLWSCMHKSGSVSVDIKASVLGR-FWLFDCLEKIPEYEQAMFLMTLWRNWYVRNELIHGK 1896 Query: 710 EKPHALKMTVETSNFIHKY-------QSARKLQMVKGHLEHGESPSK------------- 591 P T + FI Y + A + +VKG P K Sbjct: 1897 SAP----PTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLNNHQP 1952 Query: 590 -WRCPPTGKLRLDVDASFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAI 414 W P G ++L+VD SF++ G +G I+RNS+G+ + + + LE ELRA Sbjct: 1953 CWERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRAC 2012 Query: 413 MEGLVISQRANMSPHFISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSP---DSKV 243 +EGL ++ + P + +D VQ + G + + + + LL Q+P ++KV Sbjct: 2013 VEGLKLAIHWTLLPIQVETDCASVVQLLQGIGRDFSVLANIIHEARHLL-QTPSRTNTKV 2071 Query: 242 FHVYRS--ANACAHKISSFASYSPTP 171 ++ NA AH + + P P Sbjct: 2072 TTQKQTLRPNATAHCMPTDRPTEPGP 2097 >gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group] Length = 1395 Score = 189 bits (480), Expect = 3e-45 Identities = 128/476 (26%), Positives = 211/476 (44%), Gaps = 14/476 (2%) Frame = -3 Query: 1583 AKQLWRIIQSPDSLVVKVLKGRYAKHLDFLDAPLGNNPSHIWRSLFWSKDLLFKGLCWKV 1404 AKQ+WR++ PDSL +VL+ RY + L+A + + S+ W+S+ +G W+V Sbjct: 361 AKQVWRLLSDPDSLCARVLRARYYRDGKLLNARMKSGSSYTWQSILAGLQCFKQGYIWRV 420 Query: 1403 GNDKSIRIFQDNWLPSWRDPIPQSICRGRLPSRVSELI--CNNSWNESLILSVFPPCVAN 1230 G+ I+I++DNW+P + Q+ L + V ELI N +W L+ ++F P Sbjct: 421 GDGTQIKIWEDNWIPGSHNMKIQTNRGNNLVATVDELIDPINFTWGGDLLKTIFWPIDVC 480 Query: 1229 EILRIPLLSLQSEDSRFWRFNSKGIYSVRDGYR----MAIGFFDAPGCQSSRHIEKWWNF 1062 I++IP+ + +D W++N G +SV+ Y G A S+ + W Sbjct: 481 RIMQIPIRA-GRDDLVAWQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTASRSRLWKR 539 Query: 1061 IWSLNIPSKAHFFWWRLSHDFLPAEANLRAHYVPVLGVCKLCNFGTDSLLHSVFFCPVMR 882 +W+L +P+K F WR +P A L +V G C +C G + + H +F C + Sbjct: 540 LWNLKVPAKIKIFGWRALKGLVPCRAILANRHVGDSGGCPVCQNGPEDIKHMIFTCARAK 599 Query: 881 SFWK----HQLFYHFLKSAREGCTLDLCLWMR----NCLSKTEFEIFAAMSWLCWKERQK 726 W + R G + + +R L E+ +W W ER++ Sbjct: 600 QVWNSLGVEDRIQRLCMTERSGSVILEEILIREDQVQDLQVGFAELVITAAWYIWWERRQ 659 Query: 725 MIHSNEKPHALKMTVETSNFIHKYQSARKLQMVKGHLEHGESPSKWRCPPTGKLRLDVDA 546 ++H + + + Y+ A K V L G W+ PP GK+ ++VDA Sbjct: 660 LVHGEAVQRPARSGMAIAALTKNYKLATKKDSV---LRQG-----WKKPPEGKVMVNVDA 711 Query: 545 SFNSDKGIFSVGGIIRNSSGNPLLVFGRRFPHATSILELELRAIMEGLVISQRANMSPHF 366 F+ G +VG +IR+ SG L PH E A+ EGL+++Q+ + Sbjct: 712 GFDEMGGCGTVGSVIRDCSGGVLAAAHSFVPHLVDAPMAEAFALKEGLMLAQQIGCNRLI 771 Query: 365 ISSDSLLSVQAVTNDGEVKGYMESWVSTIKGLLVQSPDSKVFHVYRSANACAHKIS 198 I SD + VQ +T+ G + L D + H R AN AH ++ Sbjct: 772 IQSDCMEVVQIMTDGGFTANSAAAIYEDCNILWSGFADITIEHCSREANQVAHNLA 827