BLASTX nr result

ID: Rehmannia26_contig00005589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00005589
         (683 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                55   1e-11
ref|XP_003593327.1| hypothetical protein MTR_2g010270 [Medicago ...    49   1e-09
ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding sub...    45   1e-08
ref|XP_003599922.1| hypothetical protein MTR_3g048980 [Medicago ...    44   5e-08
ref|XP_006414915.1| hypothetical protein EUTSA_v10027242mg, part...    41   7e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 54.7 bits (130), Expect(2) = 1e-11
 Identities = 35/135 (25%), Positives = 60/135 (44%)
 Frame = -1

Query: 683 PAFNDKSQIQSMKCVFHDAEVYNIFP*FNFTLKLKLMMKYNFLLM*GDRIHGTIRKSHIE 504
           P     + I+  +C+FHD E                          G  +H  I K  +E
Sbjct: 31  PERRGAASIKCQECIFHDKE--------------------------GTVLHVNIPKEFVE 64

Query: 503 QFKKLFQEGRVYEIREFIVTNFTDKYKIAAGKYKILCHGKTNVFEMFDKAFPKFMYVLKD 324
           ++  + + G+VY IR F+V +    YK +  KY +  + KT V E+ D  FP  M+ L+ 
Sbjct: 65  KYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKTVVRELKDIVFPSHMFRLQP 124

Query: 323 FKELARVENVDETKL 279
             +L +  +++E +L
Sbjct: 125 LSQLKQKIDINEKEL 139



 Score = 41.6 bits (96), Expect(2) = 1e-11
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = -2

Query: 166 RITCTLWEDYVDTILPYLEDHGFQPIIVILQMCRAKI 56
           +I CT+W+D+V  + P+ +     P+I++LQ CR K+
Sbjct: 176 QIKCTVWDDHVSKLEPFYQSTKQDPVIILLQFCRVKV 212


>ref|XP_003593327.1| hypothetical protein MTR_2g010270 [Medicago truncatula]
           gi|355482375|gb|AES63578.1| hypothetical protein
           MTR_2g010270 [Medicago truncatula]
          Length = 315

 Score = 49.3 bits (116), Expect(2) = 1e-09
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
 Frame = -1

Query: 545 GDRIHGTIRKSHIEQFKKLFQEGRVYEIREFIVTNFTDKYKIAAGKYKILCHGKTNVFEM 366
           G RIH T RK  + +F+ + QEG  Y++   +V      YK+ + K+K+     +N  ++
Sbjct: 32  GGRIHATSRKDLVAKFRSMVQEGGTYQLENAMVGFNESPYKVTSHKHKLSMMHNSNFTKV 91

Query: 365 FDKAFPKFMYVLKDFKEL--ARVENVDETK 282
              A P  ++  K F E+  + VE V   K
Sbjct: 92  HSPAIPMNVFEFKPFNEILSSTVEEVSTDK 121



 Score = 39.7 bits (91), Expect(2) = 1e-09
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -2

Query: 172 NNRITCTLWEDYVDTILPYLEDH-GFQPIIVILQMCRAKIFRG 47
           NNR+ C+LW ++ D I+ +  +H    P I+ILQ C+ +++ G
Sbjct: 162 NNRLHCSLWGEHADKIVTFYGNHDNDTPTILILQFCKTRMYLG 204


>ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355480294|gb|AES61497.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 524

 Score = 45.4 bits (106), Expect(2) = 1e-08
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = -1

Query: 545 GDRIHGTIRKSHIEQFKKLFQEGRVYEIREFIVTNFTDKYKIAAGKYKILCHGKTNVFEM 366
           G RIH T+RK  + +F+ + +EG  YE+   IV      YKI + K+K+   G  +    
Sbjct: 51  GGRIHATVRKDLVARFRSMVEEGATYELHNAIVAINEGPYKITSHKHKL---GMLHNSSF 107

Query: 365 FDKAFPKFMYVLKDFKELARV--ENVDET 285
             K  P     + DF     +   NV+ET
Sbjct: 108 TKKDLPTIPINVFDFMSFNEILSSNVEET 136



 Score = 40.4 bits (93), Expect(2) = 1e-08
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -2

Query: 172 NNRITCTLWEDYVDTILPYLEDH-GFQPIIVILQMCRAKIFRG 47
           NNR+ C+LW ++ D I+ +  +H    P+++ILQ C+ + + G
Sbjct: 172 NNRLHCSLWGEHADKIVSFFVNHDNSSPVVLILQFCKTRKYLG 214


>ref|XP_003599922.1| hypothetical protein MTR_3g048980 [Medicago truncatula]
           gi|355488970|gb|AES70173.1| hypothetical protein
           MTR_3g048980 [Medicago truncatula]
          Length = 486

 Score = 44.3 bits (103), Expect(2) = 5e-08
 Identities = 26/87 (29%), Positives = 43/87 (49%)
 Frame = -1

Query: 545 GDRIHGTIRKSHIEQFKKLFQEGRVYEIREFIVTNFTDKYKIAAGKYKILCHGKTNVFEM 366
           G RIH T+RK  + +F+ + +EG  YE+   IV      YKI + K+K+     ++  + 
Sbjct: 51  GGRIHATVRKDLVARFRSMVEEGATYELHNAIVGINEGPYKITSHKHKLGMLHNSSFTKK 110

Query: 365 FDKAFPKFMYVLKDFKELARVENVDET 285
                P  ++    F E+    NV+ET
Sbjct: 111 DLPTLPINVFEFMSFNEILS-SNVEET 136



 Score = 39.3 bits (90), Expect(2) = 5e-08
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -2

Query: 172 NNRITCTLWEDYVDTILPYLEDH-GFQPIIVILQMCRAKIFRG 47
           NNR+ C+LW ++ D I+ +  +H    P+++ILQ C+   + G
Sbjct: 172 NNRLHCSLWGEHADKIVSFFVNHDNSSPVVLILQFCKTHKYLG 214


>ref|XP_006414915.1| hypothetical protein EUTSA_v10027242mg, partial [Eutrema
           salsugineum] gi|557116085|gb|ESQ56368.1| hypothetical
           protein EUTSA_v10027242mg, partial [Eutrema salsugineum]
          Length = 489

 Score = 40.8 bits (94), Expect(2) = 7e-06
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
 Frame = -1

Query: 545 GDRIHGTIRKSHIEQFKKLFQEGRVYEIREFIVTNFTDKYKIAAGKYKILCHGKTNVF-- 372
           GDRI  T+ +   + F+K   EGR   I  F V  +  +Y+     +KI+ +  T V   
Sbjct: 48  GDRIQATVERFFAKSFRKDLIEGRSVLINTFKVVEYNSEYRTKRTPFKIVFYATTTVSVC 107

Query: 371 --------EMFDKAFPKFM-------YVLKDFKELARVENVDETKLFGK 270
                   E + K+FP  +       Y++    ++ RV +V++    GK
Sbjct: 108 LDFPQDVPEKYMKSFPDILSTNLDNGYLIDVVGQIVRVGHVEDVMAQGK 156



 Score = 35.4 bits (80), Expect(2) = 7e-06
 Identities = 13/51 (25%), Positives = 31/51 (60%)
 Frame = -2

Query: 193 LYIFFDRNNRITCTLWEDYVDTILPYLEDHGFQPIIVILQMCRAKIFRGKI 41
           +Y+  + + ++ CTLW DY   +  Y++ +    ++VI+++   K +RG++
Sbjct: 163 IYLRDESDLQLPCTLWADYAKEVADYVKRNCASVVVVIIRLACIKNYRGEM 213


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