BLASTX nr result

ID: Rehmannia26_contig00005216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00005216
         (663 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu...   157   4e-36
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu...   157   4e-36
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   156   5e-36
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]   156   5e-36
emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]                   155   1e-35
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]           153   5e-35
ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi...   153   5e-35
emb|CAG26902.1| ALY protein [Nicotiana benthamiana]                   153   5e-35
gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus...   152   1e-34
ref|XP_006363386.1| PREDICTED: THO complex subunit 4-like [Solan...   151   2e-34
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor...   151   2e-34
ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer...   150   3e-34
gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus pe...   150   3e-34
emb|CAG26903.1| ALY protein [Nicotiana benthamiana]                   150   3e-34
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor...   150   3e-34
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr...   149   6e-34
ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solan...   149   6e-34
ref|XP_006349515.1| PREDICTED: THO complex subunit 4-like [Solan...   149   7e-34
ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A...   149   7e-34
ref|XP_002531375.1| RNA and export factor binding protein, putat...   149   7e-34

>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
           gi|550321275|gb|ERP51752.1| hypothetical protein
           POPTR_0016s11470g [Populus trichocarpa]
          Length = 244

 Score =  157 bits (396), Expect = 4e-36
 Identities = 86/174 (49%), Positives = 106/174 (60%), Gaps = 4/174 (2%)
 Frame = +3

Query: 132 LDMTLDDIITR----SKTXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPESMLDHG 299
           LDM+LDDII      S +                         PYS    + PE+   H 
Sbjct: 6   LDMSLDDIIENNRKSSNSRGRPRSSGGPGPSRRFSNRAGNITTPYSKPQVQAPETSWQHD 65

Query: 300 VFAAGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIHYDRSG 479
           +F       +   AR SSIETGTKL ISNL +GV+ +DI+ELFS +G LK  S+HYDRSG
Sbjct: 66  MFTDNPVSASAYPARASSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRYSVHYDRSG 125

Query: 480 RSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPPAIHG 641
           RSEGTAE+VF+RR DA SA+KRYNNVQLDG PM+IEIVG N+   P +PP+ +G
Sbjct: 126 RSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTNIATRPAVPPSTNG 179


>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
           gi|550321276|gb|ERP51753.1| hypothetical protein
           POPTR_0016s11470g [Populus trichocarpa]
          Length = 245

 Score =  157 bits (396), Expect = 4e-36
 Identities = 86/174 (49%), Positives = 106/174 (60%), Gaps = 4/174 (2%)
 Frame = +3

Query: 132 LDMTLDDIITR----SKTXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPESMLDHG 299
           LDM+LDDII      S +                         PYS    + PE+   H 
Sbjct: 6   LDMSLDDIIENNRKSSNSRGRPRSSGGPGPSRRFSNRAGNITTPYSKPQVQAPETSWQHD 65

Query: 300 VFAAGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIHYDRSG 479
           +F       +   AR SSIETGTKL ISNL +GV+ +DI+ELFS +G LK  S+HYDRSG
Sbjct: 66  MFTDNPVSASAYPARASSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRYSVHYDRSG 125

Query: 480 RSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPPAIHG 641
           RSEGTAE+VF+RR DA SA+KRYNNVQLDG PM+IEIVG N+   P +PP+ +G
Sbjct: 126 RSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTNIATRPAVPPSTNG 179


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  156 bits (395), Expect = 5e-36
 Identities = 95/181 (52%), Positives = 113/181 (62%), Gaps = 8/181 (4%)
 Frame = +3

Query: 123 MSN-LDMTLDDIITRSK------TXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPE 281
           MSN LDM+LDD+I  +K                                PYS S A  PE
Sbjct: 1   MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKA--PE 58

Query: 282 SMLDHGVFA-AGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCS 458
           +   H +FA    A+P   G R S+IETGTKL ISNL YGV+++DI+ELFS VG LK  S
Sbjct: 59  TTWQHDMFADQAAAYPAQAG-RTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYS 117

Query: 459 IHYDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPPAIH 638
           IHYDRSGRS+GTAEVVFSRR DA +A+KRYNNVQLDG PM+IEIVG N+  P  +PP  +
Sbjct: 118 IHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTN 177

Query: 639 G 641
           G
Sbjct: 178 G 178


>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
          Length = 281

 Score =  156 bits (395), Expect = 5e-36
 Identities = 95/181 (52%), Positives = 113/181 (62%), Gaps = 8/181 (4%)
 Frame = +3

Query: 123 MSN-LDMTLDDIITRSK------TXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPE 281
           MSN LDM+LDD+I  +K                                PYS S A  PE
Sbjct: 1   MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKA--PE 58

Query: 282 SMLDHGVFA-AGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCS 458
           +   H +FA    A+P   G R S+IETGTKL ISNL YGV+++DI+ELFS VG LK  S
Sbjct: 59  TTWQHDMFADQAAAYPAQAG-RTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYS 117

Query: 459 IHYDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPPAIH 638
           IHYDRSGRS+GTAEVVFSRR DA +A+KRYNNVQLDG PM+IEIVG N+  P  +PP  +
Sbjct: 118 IHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTN 177

Query: 639 G 641
           G
Sbjct: 178 G 178


>emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
          Length = 246

 Score =  155 bits (391), Expect = 1e-35
 Identities = 89/179 (49%), Positives = 110/179 (61%), Gaps = 11/179 (6%)
 Frame = +3

Query: 123 MSNLDMTLDDIITRSKT---------XXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTART 275
           MSNLD++LDD+I R+K+                                  PYS      
Sbjct: 1   MSNLDVSLDDLIKRNKSSSSRNPRPRTSGSGSGSGGPGPRRRPNRAAKRSAPYSSGPVHA 60

Query: 276 PESMLDHGVFAA-GRAFPNLGGA-RVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLK 449
           PES  DH +FA    A+P   GA  +S IETG KLLISNL YGV+++DI+ELFS  G +K
Sbjct: 61  PESTWDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDIKELFSEAGDIK 120

Query: 450 SCSIHYDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIP 626
             SIHYD+SGRS+GTAEV+FSRRRDAE+AIK+YNNVQLDG PM+IE  G N+  P + P
Sbjct: 121 RYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIEFAGPNIGAPALPP 179


>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
          Length = 240

 Score =  153 bits (386), Expect = 5e-35
 Identities = 89/182 (48%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
 Frame = +3

Query: 132 LDMTLDDIITRSK----TXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPESMLDHG 299
           LDM+LDD+I  ++    T                         PYS    + P++   H 
Sbjct: 5   LDMSLDDLIKSNRKSGLTRTRPPLNSGNGPSRRFPNRAANRTAPYS-KPVQAPDTTWQHD 63

Query: 300 VFAA-GRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIHYDRS 476
           +F   G  FP+  G R SSIETGTKL ISNL YGV+++DI+ELFS VG +K  S+HYDRS
Sbjct: 64  MFVDDGAGFPSAAG-RASSIETGTKLYISNLDYGVSNEDIKELFSEVGDMKRYSVHYDRS 122

Query: 477 GRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPPAIHGRNVRV 656
           GRS+GTAEVVFSRR DA  A KRYN VQLDG PM+IEIVG N+  P  +PPA +G+    
Sbjct: 123 GRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVATPVALPPATNGKFANP 182

Query: 657 EG 662
            G
Sbjct: 183 NG 184


>ref|XP_003606654.1| THO complex subunit [Medicago truncatula]
           gi|355507709|gb|AES88851.1| THO complex subunit
           [Medicago truncatula]
          Length = 376

 Score =  153 bits (386), Expect = 5e-35
 Identities = 78/127 (61%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
 Frame = +3

Query: 258 FSTARTPESMLDHGVFA----AGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEEL 425
           +S A+ PE+   H ++A    A  A+P   G R  SIETGTKL ISNL YGV++DDI+EL
Sbjct: 167 YSAAKAPETTWQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSNDDIKEL 226

Query: 426 FSGVGHLKSCSIHYDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNM 605
           FS VG LK   +HYDRSGRS+GTAEVVFSRR+DA +A+KRYNNVQLDG PM+IEIVG N+
Sbjct: 227 FSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNI 286

Query: 606 DLPPVIP 626
             P   P
Sbjct: 287 STPGAAP 293


>emb|CAG26902.1| ALY protein [Nicotiana benthamiana]
          Length = 249

 Score =  153 bits (386), Expect = 5e-35
 Identities = 88/182 (48%), Positives = 110/182 (60%), Gaps = 14/182 (7%)
 Frame = +3

Query: 123 MSNLDMTLDDIITRSKTXXXXXXXXXXXXXXXXXXXXXXXXX------------PYSFST 266
           MSNLD++LDD+I R+K+                                     PYS   
Sbjct: 1   MSNLDVSLDDLIKRNKSSSSRNPRPRTSGSGSGTGSGGPSPRRRFPSRAANRSAPYSSGP 60

Query: 267 ARTPESMLDHGVFAA-GRAFPNLGGAR-VSSIETGTKLLISNLHYGVTDDDIEELFSGVG 440
              P+S  DH +FA    A+P   GA  +S IETG KLLISNL YGV+++DI+ELFS  G
Sbjct: 61  VHAPDSTWDHNMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDIKELFSEAG 120

Query: 441 HLKSCSIHYDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPV 620
            +K  SIHYD+SGRS+GTAEV+FSRRRDAE+AIK+YNNVQLDG PM+IE  G N+  P +
Sbjct: 121 DIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIEFAGPNIGAPTL 180

Query: 621 IP 626
            P
Sbjct: 181 PP 182


>gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
           gi|561023569|gb|ESW22299.1| hypothetical protein
           PHAVU_005G142200g [Phaseolus vulgaris]
          Length = 245

 Score =  152 bits (383), Expect = 1e-34
 Identities = 87/172 (50%), Positives = 107/172 (62%), Gaps = 6/172 (3%)
 Frame = +3

Query: 132 LDMTLDDIITRSK---TXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPESMLDHGV 302
           LDMTLDDII  +K   +                         P  ++ A+ PES   H +
Sbjct: 5   LDMTLDDIIKNNKKSASANTRGRGRASGPGPARRLPNRAGNRPAPYAAAKAPESAWQHDM 64

Query: 303 FA---AGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIHYDR 473
           +A      AF   GG R SSIETGTKL ISNL YGV++DDI+ELF  VG LK  ++HYDR
Sbjct: 65  YADQGVATAFAGQGG-RASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLKRHTVHYDR 123

Query: 474 SGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPP 629
           SGRS+GTAEVVFSRR DA +A+KRY+NVQLDG PM++EIVG N+     +PP
Sbjct: 124 SGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAVPP 175


>ref|XP_006363386.1| PREDICTED: THO complex subunit 4-like [Solanum tuberosum]
          Length = 254

 Score =  151 bits (381), Expect = 2e-34
 Identities = 84/169 (49%), Positives = 106/169 (62%), Gaps = 8/169 (4%)
 Frame = +3

Query: 132 LDMTLDDIITRSKTXXXXXXXXXXXXXXXXXXXXXXXXXPYS-------FSTARTPESML 290
           LDMTLDD+I ++KT                         P         +STA+ PE+  
Sbjct: 6   LDMTLDDLIKKNKTGTGGKPRGRGCGAASTSSAGPSRRFPNRSANRAAPYSTAKAPEASW 65

Query: 291 DHGVFAAGRAFP-NLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIHY 467
           +H +FAA +A      G R SSIETGTKL ISNL YGV+ +DI+ELFS +G LK  ++HY
Sbjct: 66  NHDMFAADQAVAFGQAGGRASSIETGTKLYISNLDYGVSKEDIKELFSEIGDLKRYAVHY 125

Query: 468 DRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLP 614
           DRSGRS+GT EVVFSRR+D  + +KR+NNVQLDG PM+IEIVG N+  P
Sbjct: 126 DRSGRSKGTTEVVFSRRQDTLAGVKRFNNVQLDGKPMKIEIVGTNIVTP 174


>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
           gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
           subunit 4-like isoform X2 [Glycine max]
          Length = 247

 Score =  151 bits (381), Expect = 2e-34
 Identities = 88/174 (50%), Positives = 109/174 (62%), Gaps = 9/174 (5%)
 Frame = +3

Query: 132 LDMTLDDIITRSK-----TXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPESMLDH 296
           +DM+LDDII  +K     +                         PY+  TA+ PE+   H
Sbjct: 5   MDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYA--TAKAPEATWQH 62

Query: 297 GVFA----AGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIH 464
            ++A    A   +P  GG R +SIETGTKL ISNL YGV+ DDI+ELF+ VG LK  ++H
Sbjct: 63  DLYADQQVAAAGYPAQGG-RAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAVH 121

Query: 465 YDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIP 626
           YDRSGRS+GTAEVVFSRR DA +A+KRYNNVQLDG PM+IEIVG N+  P V P
Sbjct: 122 YDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP 175


>ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer arietinum]
          Length = 257

 Score =  150 bits (380), Expect = 3e-34
 Identities = 89/176 (50%), Positives = 111/176 (63%), Gaps = 6/176 (3%)
 Frame = +3

Query: 132 LDMTLDDIITRSKTXXXXXXXXXXXXXXXXXXXXXXXXXPYS--FSTARTPESMLDHGVF 305
           LDMTL+DII  +K                           ++  +S A+ PE+   H ++
Sbjct: 5   LDMTLEDIIKNNKKSGSGNPRGRSRPGPGPARRLPNRVSNHAAPYSAAKAPETTWQHDLY 64

Query: 306 A----AGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIHYDR 473
           A    A  A+   GG R  SIETGTKL ISNL Y V++DDI+ELFS VG LK   +HYDR
Sbjct: 65  ADQPVAAAAYSAQGG-RAPSIETGTKLYISNLDYAVSNDDIKELFSEVGDLKRHGVHYDR 123

Query: 474 SGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPPAIHG 641
           SGRS+GTAEVVFSRR+DA +A+KRYNNVQLDG PM+IEIVG N+  P V  PA++G
Sbjct: 124 SGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGV-APAVNG 178


>gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus persica]
          Length = 252

 Score =  150 bits (380), Expect = 3e-34
 Identities = 79/133 (59%), Positives = 98/133 (73%), Gaps = 5/133 (3%)
 Frame = +3

Query: 258 FSTARTPESMLDHGVFA--AGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFS 431
           ++ A+ PE+   H ++      AFP   G R S+IETGTKL ISNL YGV+++DI+ELFS
Sbjct: 50  YAAAKAPETAWQHDLYTDQGAAAFPAQAG-RASAIETGTKLYISNLDYGVSNEDIKELFS 108

Query: 432 GVGHLKSCSIHYDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDL 611
            VG LK   +HYDRSGRS+GTAEVVFSRR DA +A+KRYNNVQLDG PM+IEIVG N+  
Sbjct: 109 EVGDLKRYGVHYDRSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNIST 168

Query: 612 ---PPVIPPAIHG 641
              PP +PPA +G
Sbjct: 169 PGGPPTLPPAANG 181


>emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
          Length = 252

 Score =  150 bits (380), Expect = 3e-34
 Identities = 91/179 (50%), Positives = 115/179 (64%), Gaps = 9/179 (5%)
 Frame = +3

Query: 132 LDMTLDDIITRSKTXXXXXXXXXXXXXXXXXXXXXXXXXPYS-----FSTARTPESMLDH 296
           LDM+LDD+I ++KT                           +     +STA+ PE+  +H
Sbjct: 6   LDMSLDDLIKKNKTDTGGKRRGRGRGGASGPGPARRFPNRSANRAAPYSTAKAPEAAWNH 65

Query: 297 GVFAAG-RAFP--NLGGARV-SSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIH 464
            +FAA  +AFP    GG +  SSI TGTKL ISNL YGV+++DI+ELFS  G LK  +IH
Sbjct: 66  DMFAAADQAFPFGQAGGDQAASSISTGTKLYISNLDYGVSNEDIKELFSEAGDLKRYAIH 125

Query: 465 YDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPPAIHG 641
           YDRSGRS+GTAEVVFSRR+DA +A+KRYNNVQLDG PM+IEIVG N+  P    PA +G
Sbjct: 126 YDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA--PAFNG 182


>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
           gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
           subunit 4-like isoform X2 [Glycine max]
          Length = 247

 Score =  150 bits (379), Expect = 3e-34
 Identities = 88/174 (50%), Positives = 109/174 (62%), Gaps = 9/174 (5%)
 Frame = +3

Query: 132 LDMTLDDIITRSK-----TXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPESMLDH 296
           +DM+LDDII  +K     +                         PY+   A+ PE+   H
Sbjct: 5   MDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYA--PAKAPEATWQH 62

Query: 297 GVFA----AGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIH 464
            ++A    A   +P  GG R +SIETGTKL ISNL YGV++DDI+ELF+ VG LK  ++H
Sbjct: 63  DLYADQHVAAAGYPAQGG-RAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAVH 121

Query: 465 YDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIP 626
           YDRSGRS+GTAEVVFSRR DA SA+KRYNNVQLDG PM+IEIVG N+  P V P
Sbjct: 122 YDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP 175


>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
           gi|567864256|ref|XP_006424777.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|567864258|ref|XP_006424778.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|567864260|ref|XP_006424779.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|557526710|gb|ESR38016.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|557526711|gb|ESR38017.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|557526712|gb|ESR38018.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|557526713|gb|ESR38019.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
          Length = 247

 Score =  149 bits (377), Expect = 6e-34
 Identities = 90/175 (51%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
 Frame = +3

Query: 126 SNLDMTLDDIITRSK-----TXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPESML 290
           S LDM+LDDII  +K                               PY+  TA+ PE+  
Sbjct: 3   SALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYT--TAKAPETTW 60

Query: 291 DHGVFAAG-RAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIHY 467
            H +FA    AFP     R S+IETGTKL ISNL YGV+++DI+ELFS VG LK  SIHY
Sbjct: 61  QHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 120

Query: 468 DRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPPA 632
           DRSGRS+GTAEVV+SRR DA +A+KRYNNVQLDG PM+IEIVG N+      P A
Sbjct: 121 DRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAAPAA 175


>ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solanum lycopersicum]
          Length = 251

 Score =  149 bits (377), Expect = 6e-34
 Identities = 83/169 (49%), Positives = 107/169 (63%), Gaps = 8/169 (4%)
 Frame = +3

Query: 132 LDMTLDDIITRSKTXXXXXXXXXXXXXXXXXXXXXXXXXP-------YSFSTARTPESML 290
           LDMTLDD+I ++KT                         P         +S A+ P++  
Sbjct: 6   LDMTLDDLIKKNKTGTGGKPRGRGRGAASTSSAGPSRRVPNRSANRAAPYSIAKAPQASW 65

Query: 291 DHGVFAAGRAFP-NLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSIHY 467
           +H +F A +A      G R SSIETGTKL ISNL YGV+++DI+ELFS +G LK  ++HY
Sbjct: 66  NHDMFEADQAVAFGQAGGRASSIETGTKLYISNLDYGVSNEDIKELFSEIGDLKRYAVHY 125

Query: 468 DRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLP 614
           DRSGRS+GTAEVVFSRR+DA + +KR+NNVQLDG PM+IEIVG N+  P
Sbjct: 126 DRSGRSKGTAEVVFSRRQDALAGVKRFNNVQLDGKPMKIEIVGTNIVTP 174


>ref|XP_006349515.1| PREDICTED: THO complex subunit 4-like [Solanum tuberosum]
          Length = 247

 Score =  149 bits (376), Expect = 7e-34
 Identities = 90/184 (48%), Positives = 109/184 (59%), Gaps = 15/184 (8%)
 Frame = +3

Query: 123 MSNLDMTLDDIITRSKTXXXXXXXXXXXXXXXXXXXXXXXXX---------------PYS 257
           MSNLD++LDD+I R+K+                                        PYS
Sbjct: 1   MSNLDVSLDDLIKRNKSSTSRNPRPRTAGSGSGSGPGFDSGPGPRRRFPNRASNRPAPYS 60

Query: 258 FSTARTPESMLDHGVFAAGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEELFSGV 437
                 PES  DH +FA   A  +  G  VS IET  KLLISNL YGV+++DI+ELFS  
Sbjct: 61  ---VHAPESTWDHDMFAE-HAPSSARGPGVSGIETRIKLLISNLDYGVSNEDIKELFSEA 116

Query: 438 GHLKSCSIHYDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPP 617
           G +K  SIHYD+SGRS+GTAEV+FSRRRDAE+AIKRYNNVQLDG PM+IE  G N+  PP
Sbjct: 117 GDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKRYNNVQLDGKPMKIEFAGTNI-APP 175

Query: 618 VIPP 629
            +PP
Sbjct: 176 ALPP 179


>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
           gi|548848813|gb|ERN07718.1| hypothetical protein
           AMTR_s00012p00035940 [Amborella trichopoda]
          Length = 253

 Score =  149 bits (376), Expect = 7e-34
 Identities = 81/133 (60%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
 Frame = +3

Query: 249 PYSFSTA--RTPESMLDHGVFAAGRAFPNLGGARVSSIETGTKLLISNLHYGVTDDDIEE 422
           PYS   A    PE+   H +FA       +  AR S+IETGTKL ISNL YGV+++DI+E
Sbjct: 53  PYSMGKAFQAAPETTWQHDLFADPVGPYGVQAARPSAIETGTKLYISNLDYGVSNEDIKE 112

Query: 423 LFSGVGHLKSCSIHYDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMN 602
           LFS VG LK  SIHYDRSGRS+GTAEVVFSRR DA +A+KRYNNVQLDG PM+IEIVG N
Sbjct: 113 LFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTN 172

Query: 603 MDLPPVIPPAIHG 641
           +  P  IP   +G
Sbjct: 173 LVTPAPIPQVANG 185


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score =  149 bits (376), Expect = 7e-34
 Identities = 88/177 (49%), Positives = 105/177 (59%), Gaps = 8/177 (4%)
 Frame = +3

Query: 126 SNLDMTLDDIITRSK---TXXXXXXXXXXXXXXXXXXXXXXXXXPYSFSTARTPESMLDH 296
           S LDM+LDDII  +K   +                            ++ A+ PES   H
Sbjct: 3   SALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAAKAPESTWQH 62

Query: 297 GVFAAGRAFPNL-----GGARVSSIETGTKLLISNLHYGVTDDDIEELFSGVGHLKSCSI 461
            +F              GG+R S IETGTKL ISNL YGV+++DI+ELFS VG LK  SI
Sbjct: 63  DMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSI 122

Query: 462 HYDRSGRSEGTAEVVFSRRRDAESAIKRYNNVQLDGMPMRIEIVGMNMDLPPVIPPA 632
           HYDRSGRS+GTAEVVFSRR DA +A+KRYNNVQLDG PM+IEIVG N+  P   P A
Sbjct: 123 HYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATPAA 179


Top