BLASTX nr result

ID: Rehmannia26_contig00005030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00005030
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS59907.1| hypothetical protein M569_14900, partial [Genlise...    73   7e-11
ref|XP_006343910.1| PREDICTED: GDT1-like protein 1, chloroplasti...    67   4e-09
ref|XP_004245555.1| PREDICTED: GDT1-like protein 1, chloroplasti...    63   7e-08
ref|XP_002304531.2| hypothetical protein POPTR_0003s13410g [Popu...    62   9e-08
ref|XP_004173588.1| PREDICTED: GDT1-like protein 1, chloroplasti...    59   1e-06
ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplasti...    59   1e-06

>gb|EPS59907.1| hypothetical protein M569_14900, partial [Genlisea aurea]
          Length = 87

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 40/66 (60%), Positives = 49/66 (74%)
 Frame = +3

Query: 399 LNESMKKCATLLDYRVQNAPSLSYLKLMLMCGFFTLQTTQQALAGSDVTSSLQSFSFLGD 578
           L+ S++K  T  D+  Q      +LKL+L+CGFFTLQTTQQA AG DV S+LQ+FSFLGD
Sbjct: 3   LSMSIRKNKT--DFCNQVCTKPHHLKLLLLCGFFTLQTTQQATAGVDVASNLQAFSFLGD 60

Query: 579 LDDIST 596
           L DIST
Sbjct: 61  LGDIST 66


>ref|XP_006343910.1| PREDICTED: GDT1-like protein 1, chloroplastic-like [Solanum
           tuberosum]
          Length = 361

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 50/134 (37%), Positives = 69/134 (51%)
 Frame = +3

Query: 195 PCFSFYFPPQYHFSRKIFAGKPSYGSQIPSFTAVASKKELMTTKEKCYNCTPSPHTSKIC 374
           P FS   PP    SR  F+ + S   Q+  F  + SK       ++CY  T S +    C
Sbjct: 22  PNFSPANPPLIAISR--FSRRHSLCKQLGWFEDI-SKVVRTRNYKRCY-ITRSAYGVDEC 77

Query: 375 SSTGKLTLLNESMKKCATLLDYRVQNAPSLSYLKLMLMCGFFTLQTTQQALAGSDVTSSL 554
           SST +  LL    +  +     +V + P  +YLK +++ G FTL  TQQA A S+V + L
Sbjct: 78  SSTNRTALLKRKNQSTSV----QVLDMPENNYLKAVVLSGLFTLLFTQQASAASEVATGL 133

Query: 555 QSFSFLGDLDDIST 596
           QSF F GDL D+ST
Sbjct: 134 QSFPFFGDLGDLST 147


>ref|XP_004245555.1| PREDICTED: GDT1-like protein 1, chloroplastic-like [Solanum
           lycopersicum]
          Length = 362

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 38/97 (39%), Positives = 53/97 (54%)
 Frame = +3

Query: 306 KELMTTKEKCYNCTPSPHTSKICSSTGKLTLLNESMKKCATLLDYRVQNAPSLSYLKLML 485
           K + T   K  + T S +  + CS T K  L     +  + L   +V + P  +YLK ++
Sbjct: 55  KVVRTRNYKRCHMTRSAYCDEECSITNKTALSKRKNQSTSVL---QVLDMPENNYLKSIV 111

Query: 486 MCGFFTLQTTQQALAGSDVTSSLQSFSFLGDLDDIST 596
           + G FTL  TQQA A S+V + LQSF F GDL D+ST
Sbjct: 112 LSGLFTLLFTQQASAASEVATGLQSFPFFGDLGDLST 148


>ref|XP_002304531.2| hypothetical protein POPTR_0003s13410g [Populus trichocarpa]
           gi|550343097|gb|EEE79510.2| hypothetical protein
           POPTR_0003s13410g [Populus trichocarpa]
          Length = 457

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 13/141 (9%)
 Frame = +3

Query: 213 FPPQYHFSRKIFAGKPSYGSQIPSFTAVASKKELMTTKEKCYNCTPSPHTS--------- 365
           F P   FS+K  + K SYG+      +  S++  + + E+ +    S H+          
Sbjct: 30  FLPLNSFSKKHNSSKLSYGNHPSFIFSRFSRQCCVNSFEETFGLVLSKHSKNRDGLGLRD 89

Query: 366 ---KICSSTGKLTLLNESMKKCATLLDYRVQNAPSLS-YLKLMLMCGFFTLQTTQQALAG 533
              K   +T     +   +KK ++  ++ V +APS   +LK++L+ G+ TLQ ++ A+AG
Sbjct: 90  LGCKNYQNTTGTVSVKSLVKKKSSRENHTVASAPSNGGFLKILLIFGYLTLQGSRPAVAG 149

Query: 534 SDVTSSLQSFSFLGDLDDIST 596
           +D++++LQS  +LGDL DIST
Sbjct: 150 TDISTALQSIPYLGDLGDIST 170


>ref|XP_004173588.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 234

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = +3

Query: 459 SLSYLKLMLMCGFFTLQTTQQALAGSDVTSSLQSFSFLGDLDDIST 596
           S S+LK ML+ GFF LQ +Q ALAGSDV + LQS   LGDL DIST
Sbjct: 81  SSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDIST 126


>ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 342

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = +3

Query: 459 SLSYLKLMLMCGFFTLQTTQQALAGSDVTSSLQSFSFLGDLDDIST 596
           S S+LK ML+ GFF LQ +Q ALAGSDV + LQS   LGDL DIST
Sbjct: 83  SSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDIST 128


Top