BLASTX nr result

ID: Rehmannia26_contig00004879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00004879
         (312 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304442.2| DNA-binding family protein [Populus trichoca...    67   2e-09
ref|XP_006368725.1| DNA-binding family protein, partial [Populus...    60   2e-07
ref|XP_002329847.1| predicted protein [Populus trichocarpa]            60   2e-07
ref|XP_002509630.1| DNA binding protein, putative [Ricinus commu...    60   3e-07
ref|XP_006477307.1| PREDICTED: uncharacterized protein LOC102613...    60   4e-07
gb|EOY24515.1| AT-hook motif nuclear-localized protein 1 isoform...    60   4e-07
gb|EOY24514.1| AT-hook motif nuclear-localized protein 1 isoform...    60   4e-07
gb|EOY24513.1| AT-hook motif nuclear-localized protein 1 isoform...    60   4e-07
ref|XP_006440435.1| hypothetical protein CICLE_v10021222mg [Citr...    59   9e-07
ref|XP_004147567.1| PREDICTED: uncharacterized protein LOC101210...    55   1e-05

>ref|XP_002304442.2| DNA-binding family protein [Populus trichocarpa]
           gi|550342987|gb|EEE79421.2| DNA-binding family protein
           [Populus trichocarpa]
          Length = 332

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -3

Query: 304 IMPTAAIPISSAGFDDAYHTSPSFRGDSWSSMAPESRNKPTDINVTLP 161
           +MPTAAIPIS A     + +SPSFRGDSWS + PESRNKP DIN+TLP
Sbjct: 284 VMPTAAIPISIADPKSNF-SSPSFRGDSWSPLPPESRNKPADINLTLP 330


>ref|XP_006368725.1| DNA-binding family protein, partial [Populus trichocarpa]
           gi|550346812|gb|ERP65294.1| DNA-binding family protein,
           partial [Populus trichocarpa]
          Length = 287

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = -3

Query: 304 IMPTAAIPISSAGFDDAYHTSPSFRGDSWSSMAPESRNKPTDINVTLP 161
           ++ TAAIPISSA     + +S SFRGDSWS + P+SRNKP DINVTLP
Sbjct: 238 VVLTAAIPISSADPKTNFSSS-SFRGDSWSPLPPDSRNKPADINVTLP 284


>ref|XP_002329847.1| predicted protein [Populus trichocarpa]
          Length = 297

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = -3

Query: 304 IMPTAAIPISSAGFDDAYHTSPSFRGDSWSSMAPESRNKPTDINVTLP 161
           ++ TAAIPISSA     + +S SFRGDSWS + P+SRNKP DINVTLP
Sbjct: 248 VVLTAAIPISSADPKTNFSSS-SFRGDSWSPLPPDSRNKPADINVTLP 294


>ref|XP_002509630.1| DNA binding protein, putative [Ricinus communis]
           gi|223549529|gb|EEF51017.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 322

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/51 (62%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
 Frame = -3

Query: 310 MTIMPTAAIPISSAGFDDAYHTSPS-FRGDSWSSMAPESRNKPTDINVTLP 161
           +TI  TAAIPISS+  D   + SPS FRGDSWSS+  ++RNKPTDIN++LP
Sbjct: 272 ITITTTAAIPISSS--DPKLNLSPSSFRGDSWSSLPTDARNKPTDINMSLP 320


>ref|XP_006477307.1| PREDICTED: uncharacterized protein LOC102613375 [Citrus sinensis]
          Length = 318

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -3

Query: 298 PTAAIPISSAGFDDAYHTSPSFRGDSWSSMAPESRNKPTDINVTLP 161
           PTAAIPISSA    +  TS SFRGD WSS+  +SRNKPTDIN +LP
Sbjct: 272 PTAAIPISSADPKGSLTTS-SFRGDGWSSLPSDSRNKPTDINASLP 316


>gb|EOY24515.1| AT-hook motif nuclear-localized protein 1 isoform 3 [Theobroma
           cacao]
          Length = 332

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -3

Query: 298 PTAAIPISSAGFDDAYHTSPSFRGDSWSSMAPESRNKPTDINVTLP 161
           P AAIP+SSA       TS SFRGDSWSS+  +SRNKPTDINV+LP
Sbjct: 286 PMAAIPVSSADPKSNLSTS-SFRGDSWSSLPSDSRNKPTDINVSLP 330


>gb|EOY24514.1| AT-hook motif nuclear-localized protein 1 isoform 2 [Theobroma
           cacao]
          Length = 331

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -3

Query: 298 PTAAIPISSAGFDDAYHTSPSFRGDSWSSMAPESRNKPTDINVTLP 161
           P AAIP+SSA       TS SFRGDSWSS+  +SRNKPTDINV+LP
Sbjct: 285 PMAAIPVSSADPKSNLSTS-SFRGDSWSSLPSDSRNKPTDINVSLP 329


>gb|EOY24513.1| AT-hook motif nuclear-localized protein 1 isoform 1 [Theobroma
           cacao]
          Length = 398

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -3

Query: 298 PTAAIPISSAGFDDAYHTSPSFRGDSWSSMAPESRNKPTDINVTLP 161
           P AAIP+SSA       TS SFRGDSWSS+  +SRNKPTDINV+LP
Sbjct: 352 PMAAIPVSSADPKSNLSTS-SFRGDSWSSLPSDSRNKPTDINVSLP 396


>ref|XP_006440435.1| hypothetical protein CICLE_v10021222mg [Citrus clementina]
           gi|557542697|gb|ESR53675.1| hypothetical protein
           CICLE_v10021222mg [Citrus clementina]
          Length = 318

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -3

Query: 298 PTAAIPISSAGFDDAYHTSPSFRGDSWSSMAPESRNKPTDINVTLP 161
           PTAAIPISSA    +  TS +FRGD WSS+  +SRNKPTDIN +LP
Sbjct: 272 PTAAIPISSADPKGSLTTS-TFRGDGWSSLPSDSRNKPTDINASLP 316


>ref|XP_004147567.1| PREDICTED: uncharacterized protein LOC101210208 [Cucumis sativus]
           gi|449523579|ref|XP_004168801.1| PREDICTED:
           uncharacterized LOC101210208 [Cucumis sativus]
          Length = 330

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/48 (56%), Positives = 32/48 (66%)
 Frame = -3

Query: 298 PTAAIPISSAGFDDAYHTSPSFRGDSWSSMAPESRNKPTDINVTLPGS 155
           PTAAIPIS          S SFRGD+WS +  +SRNK TDINV+LP +
Sbjct: 283 PTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 330


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