BLASTX nr result
ID: Rehmannia26_contig00004876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00004876
(974 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006362977.1| PREDICTED: U1 small nuclear ribonucleoprotei... 138 4e-30
ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [S... 138 4e-30
ref|XP_006444209.1| hypothetical protein CICLE_v10022350mg [Citr... 126 1e-26
emb|CBI32274.3| unnamed protein product [Vitis vinifera] 126 1e-26
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263... 126 1e-26
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati... 126 1e-26
gb|EXB29124.1| U1 small nuclear ribonucleoprotein C [Morus notab... 125 2e-26
ref|XP_004954569.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuc... 124 4e-26
ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotei... 124 4e-26
gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays] 124 4e-26
gb|AFW65850.1| WW domain-binding protein 11 [Zea mays] 124 4e-26
gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays] 124 4e-26
gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein is... 123 9e-26
gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein is... 123 9e-26
ref|XP_006855383.1| hypothetical protein AMTR_s00057p00133180 [A... 123 1e-25
ref|XP_003572258.1| PREDICTED: uncharacterized protein LOC100822... 123 1e-25
ref|XP_002453652.1| hypothetical protein SORBIDRAFT_04g009880 [S... 123 1e-25
ref|XP_002452566.1| hypothetical protein SORBIDRAFT_04g028260 [S... 123 1e-25
gb|ACN25291.1| unknown [Zea mays] 123 1e-25
ref|XP_002304170.1| proline-rich family protein [Populus trichoc... 123 1e-25
>ref|XP_006362977.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Solanum tuberosum] gi|565394667|ref|XP_006362978.1|
PREDICTED: U1 small nuclear ribonucleoprotein C-like
isoform X2 [Solanum tuberosum]
Length = 197
Score = 138 bits (347), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLGA 628
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHK NVR+YYQQ+EAQLNQSLIDQKVKEHLGA
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLGA 60
Query: 627 FRPPVAPYNQ 598
FRP P+ Q
Sbjct: 61 FRPVGLPFPQ 70
>ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [Solanum lycopersicum]
gi|62751087|dbj|BAD95791.1| similar to u1 small nuclear
ribonucleoprotein C [Solanum lycopersicum]
Length = 197
Score = 138 bits (347), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLGA 628
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHK NVR+YYQQ+EAQLNQSLIDQKVKEHLGA
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLGA 60
Query: 627 FRPPVAPYNQ 598
FRP P+ Q
Sbjct: 61 FRPVGLPFPQ 70
>ref|XP_006444209.1| hypothetical protein CICLE_v10022350mg [Citrus clementina]
gi|568852371|ref|XP_006479851.1| PREDICTED: U1 small
nuclear ribonucleoprotein C-like [Citrus sinensis]
gi|557546471|gb|ESR57449.1| hypothetical protein
CICLE_v10022350mg [Citrus clementina]
Length = 197
Score = 126 bits (316), Expect = 1e-26
Identities = 59/73 (80%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ A YNQ
Sbjct: 61 TAAFQQVGAAYNQ 73
>emb|CBI32274.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 126 bits (316), Expect = 1e-26
Identities = 59/73 (80%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ A YNQ
Sbjct: 61 TAAFQQVGAAYNQ 73
>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
small nuclear ribonucleoprotein C; Short=U1 snRNP C;
Short=U1-C; Short=U1C
Length = 213
Score = 126 bits (316), Expect = 1e-26
Identities = 59/73 (80%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ A YNQ
Sbjct: 61 TAAFQQVGAAYNQ 73
>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
gi|223540083|gb|EEF41660.1| U1 small nuclear
ribonucleoprotein C, putative [Ricinus communis]
Length = 206
Score = 126 bits (316), Expect = 1e-26
Identities = 59/73 (80%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ A YNQ
Sbjct: 61 AAAFQQVGAAYNQ 73
>gb|EXB29124.1| U1 small nuclear ribonucleoprotein C [Morus notabilis]
Length = 250
Score = 125 bits (315), Expect = 2e-26
Identities = 59/78 (75%), Positives = 64/78 (82%), Gaps = 4/78 (5%)
Frame = -3
Query: 819 QNCAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKE 640
Q AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KE
Sbjct: 43 QRTAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKE 102
Query: 639 HLG----AFRPPVAPYNQ 598
HLG A+ A YNQ
Sbjct: 103 HLGQAAAAYHHVGAAYNQ 120
>ref|XP_004954569.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
C-1-like [Setaria italica]
Length = 265
Score = 124 bits (312), Expect = 4e-26
Identities = 60/78 (76%), Positives = 66/78 (84%), Gaps = 3/78 (3%)
Frame = -3
Query: 822 AQNCAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVK 643
A AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++K
Sbjct: 34 AAAAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIK 93
Query: 642 EHLG---AFRPPVAPYNQ 598
EHLG AF+ AP+NQ
Sbjct: 94 EHLGQAAAFQVG-APFNQ 110
>ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
sativus] gi|449491514|ref|XP_004158922.1| PREDICTED: U1
small nuclear ribonucleoprotein C-like [Cucumis sativus]
Length = 197
Score = 124 bits (312), Expect = 4e-26
Identities = 58/73 (79%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ A +NQ
Sbjct: 61 AAAFQQVGAAFNQ 73
>gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 322
Score = 124 bits (312), Expect = 4e-26
Identities = 59/74 (79%), Positives = 65/74 (87%), Gaps = 3/74 (4%)
Frame = -3
Query: 810 AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG 631
AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG
Sbjct: 193 AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLG 252
Query: 630 ---AFRPPVAPYNQ 598
AF+ AP+NQ
Sbjct: 253 QAAAFQAG-APFNQ 265
>gb|AFW65850.1| WW domain-binding protein 11 [Zea mays]
Length = 421
Score = 124 bits (312), Expect = 4e-26
Identities = 59/74 (79%), Positives = 65/74 (87%), Gaps = 3/74 (4%)
Frame = -3
Query: 810 AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG 631
AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG
Sbjct: 193 AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLG 252
Query: 630 ---AFRPPVAPYNQ 598
AF+ AP+NQ
Sbjct: 253 QAAAFQAG-APFNQ 265
>gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 345
Score = 124 bits (312), Expect = 4e-26
Identities = 59/74 (79%), Positives = 65/74 (87%), Gaps = 3/74 (4%)
Frame = -3
Query: 810 AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG 631
AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG
Sbjct: 193 AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLG 252
Query: 630 ---AFRPPVAPYNQ 598
AF+ AP+NQ
Sbjct: 253 QAAAFQAG-APFNQ 265
>gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein isoform 2 [Theobroma
cacao]
Length = 195
Score = 123 bits (309), Expect = 9e-26
Identities = 57/73 (78%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ A +NQ
Sbjct: 61 AAAFQQVGAAFNQ 73
>gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma
cacao]
Length = 208
Score = 123 bits (309), Expect = 9e-26
Identities = 57/73 (78%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ A +NQ
Sbjct: 61 AAAFQQVGAAFNQ 73
>ref|XP_006855383.1| hypothetical protein AMTR_s00057p00133180 [Amborella trichopoda]
gi|548859149|gb|ERN16850.1| hypothetical protein
AMTR_s00057p00133180 [Amborella trichopoda]
Length = 224
Score = 123 bits (308), Expect = 1e-25
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ+E Q QSLIDQKVKEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQKVKEHLG 59
>ref|XP_003572258.1| PREDICTED: uncharacterized protein LOC100822246 [Brachypodium
distachyon]
Length = 211
Score = 123 bits (308), Expect = 1e-25
Identities = 58/73 (79%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQ+E Q QSL+DQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLLDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ AP+NQ
Sbjct: 61 AAAFQVG-APFNQ 72
>ref|XP_002453652.1| hypothetical protein SORBIDRAFT_04g009880 [Sorghum bicolor]
gi|363805507|sp|C5XZK6.1|RU1C1_SORBI RecName: Full=U1
small nuclear ribonucleoprotein C-1; Short=U1 snRNP C-1;
Short=U1-C-1; Short=U1C-1 gi|241933483|gb|EES06628.1|
hypothetical protein SORBIDRAFT_04g009880 [Sorghum
bicolor]
Length = 231
Score = 123 bits (308), Expect = 1e-25
Identities = 58/73 (79%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ AP+NQ
Sbjct: 61 AAAFQAG-APFNQ 72
>ref|XP_002452566.1| hypothetical protein SORBIDRAFT_04g028260 [Sorghum bicolor]
gi|363805509|sp|C5XYW4.1|RU1C2_SORBI RecName: Full=U1
small nuclear ribonucleoprotein C-2; Short=U1 snRNP C-2;
Short=U1-C-2; Short=U1C-2 gi|241932397|gb|EES05542.1|
hypothetical protein SORBIDRAFT_04g028260 [Sorghum
bicolor]
Length = 228
Score = 123 bits (308), Expect = 1e-25
Identities = 58/73 (79%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ AP+NQ
Sbjct: 61 AAAFQAG-APFNQ 72
>gb|ACN25291.1| unknown [Zea mays]
Length = 129
Score = 123 bits (308), Expect = 1e-25
Identities = 58/73 (79%), Positives = 64/73 (87%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ AP+NQ
Sbjct: 61 AAAFQAG-APFNQ 72
>ref|XP_002304170.1| proline-rich family protein [Populus trichocarpa]
gi|222841602|gb|EEE79149.1| proline-rich family protein
[Populus trichocarpa]
Length = 202
Score = 123 bits (308), Expect = 1e-25
Identities = 57/73 (78%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = -3
Query: 807 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQYEAQLNQSLIDQKVKEHLG- 631
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQ+E Q QS+IDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60
Query: 630 --AFRPPVAPYNQ 598
AF+ A YNQ
Sbjct: 61 TAAFQQVGAAYNQ 73