BLASTX nr result

ID: Rehmannia26_contig00004647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00004647
         (397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350337.1| PREDICTED: transcription factor TCP8-like [S...    68   1e-09

>ref|XP_006350337.1| PREDICTED: transcription factor TCP8-like [Solanum tuberosum]
          Length = 389

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 50/134 (37%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
 Frame = +1

Query: 7   MEFMEPHTKKQGANSNNNSDHR----DAAAASSLQLVSXXXXXNRXXXXXXXXXXXXXXX 174
           MEFMEPH KKQG +++  + H+    +  A SSLQL+S                      
Sbjct: 1   MEFMEPHRKKQGGSTSATNHHQHHQHNQEAPSSLQLISP-----HQSQPDPSTPGSNHPH 55

Query: 175 XXFMGSISMQQSRNLLPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVKKPSKD 354
             FMGSISMQ +  + P                                  K VKKPSKD
Sbjct: 56  GPFMGSISMQSTTLISP------------------PSTNSPTPNNNALSTPKVVKKPSKD 97

Query: 355 RHTKVDGRGRRIRM 396
           RHTKVDGRGRRIRM
Sbjct: 98  RHTKVDGRGRRIRM 111


Top