BLASTX nr result

ID: Rehmannia26_contig00004534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00004534
         (394 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW04477.1| hypothetical protein PHAVU_011G097800g [Phaseolus...    71   1e-10
gb|ESW04476.1| hypothetical protein PHAVU_011G097800g [Phaseolus...    71   1e-10
ref|XP_006593035.1| PREDICTED: 5'-3' exoribonuclease 3-like, par...    64   2e-08
ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula] ...    57   3e-06
ref|XP_004308764.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fra...    56   4e-06

>gb|ESW04477.1| hypothetical protein PHAVU_011G097800g [Phaseolus vulgaris]
          Length = 898

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
 Frame = +3

Query: 6    GTIHLMPE--DLIEADDNNNGEDARKNLCMFYEINHGFQFVPRLLECVNIPVKTVDEEDI 179
            GTI L  E  D   +D  ++ ED  + LC++YE+  G   +PRLL  V++P KT+ E DI
Sbjct: 685  GTISLCHEFVDKPCSDICDSKED--RVLCVYYELPTGSNHIPRLLSGVSLPEKTIFEGDI 742

Query: 180  VETVLWHEASNNSN---RFQNRRPIKPERKSEPSS-QDRAPAF--ISKGAGCGFSLGRGK 341
            +ET LWHE   + +   R QN+   + E +S  S     AP+F  I  G G G+ LGRG+
Sbjct: 743  METELWHERQKHFSIYGRVQNQDKSRSEDRSNTSRFSSNAPSFIHIKGGGGVGWGLGRGR 802

Query: 342  TPATLRTQ 365
               T++ +
Sbjct: 803  KVNTVKNE 810


>gb|ESW04476.1| hypothetical protein PHAVU_011G097800g [Phaseolus vulgaris]
          Length = 841

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
 Frame = +3

Query: 6    GTIHLMPE--DLIEADDNNNGEDARKNLCMFYEINHGFQFVPRLLECVNIPVKTVDEEDI 179
            GTI L  E  D   +D  ++ ED  + LC++YE+  G   +PRLL  V++P KT+ E DI
Sbjct: 628  GTISLCHEFVDKPCSDICDSKED--RVLCVYYELPTGSNHIPRLLSGVSLPEKTIFEGDI 685

Query: 180  VETVLWHEASNNSN---RFQNRRPIKPERKSEPSS-QDRAPAF--ISKGAGCGFSLGRGK 341
            +ET LWHE   + +   R QN+   + E +S  S     AP+F  I  G G G+ LGRG+
Sbjct: 686  METELWHERQKHFSIYGRVQNQDKSRSEDRSNTSRFSSNAPSFIHIKGGGGVGWGLGRGR 745

Query: 342  TPATLRTQ 365
               T++ +
Sbjct: 746  KVNTVKNE 753


>ref|XP_006593035.1| PREDICTED: 5'-3' exoribonuclease 3-like, partial [Glycine max]
          Length = 684

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
 Frame = +3

Query: 51  NNNGEDARKNLCMFYEINHGFQFVPRLLECVNIPVKTVDEEDIVETVLWHEASNNSNRF- 227
           +N  ED+   LC++YE+  G   +P LL  V +P KT+ E DI+ET LWHE     +RF 
Sbjct: 431 DNKKEDSV--LCVYYELPAGSNHIPGLLSDVKLPEKTIFESDIMETELWHERQKYYSRFE 488

Query: 228 --QNRRPIKPERKSEPSS-------------QDRAPAFISKGAGCGFSLGRGK 341
             QN+   + E  S  S                  P F  +GAG G+  GRGK
Sbjct: 489 RVQNQDNWRSENTSNTSRFASNAISQHTRIFSSNTPLFTFQGAGVGWGSGRGK 541


>ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 866

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/121 (36%), Positives = 57/121 (47%), Gaps = 19/121 (15%)
 Frame = +3

Query: 39   EADDNNNGEDARKNLCMFYEIN-HGFQFVPRLLECVNIPVKTVDEEDIVETVLWHEAS-- 209
            E  +NN  ED     C+ YE    G   V  LL  VN+P KT+ E DI ETVLWH+ S  
Sbjct: 683  ECVENNKHEDIV--FCVKYEHPVGGTSHVQHLLCGVNLPEKTIFENDINETVLWHDQSQQ 740

Query: 210  -------NNSNRFQNRRPIKPERKSEPS---------SQDRAPAFISKGAGCGFSLGRGK 341
                   NN + ++N        K  P+         S++  P  I KGAG G+  GRGK
Sbjct: 741  YSCFGRANNQDNWRNSNKEGNVSKFHPNSTSFGGRSFSRNAPPESIHKGAGVGWGSGRGK 800

Query: 342  T 344
            +
Sbjct: 801  S 801


>ref|XP_004308764.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fragaria vesca subsp. vesca]
          Length = 968

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 17/118 (14%)
 Frame = +3

Query: 39   EADDNN---NGEDARKN---LCMFYEINHGFQFVPRLLECVNIPVKTVDEEDIVETVLWH 200
            + DDN+    G+D+ +    LC  YE+ +    +PRLL+ + +P KT++E +++ETVLWH
Sbjct: 692  QLDDNDAKVKGDDSSEEDPVLCALYELPNTSLHMPRLLDGLQLPPKTINECELLETVLWH 751

Query: 201  EASNNSNRFQ----NRRPIKPERKSEPSSQDR------APA-FISKGAGCGFSLGRGK 341
            E   N+          R  KP      S Q+       +PA  I K AG G+  GRG+
Sbjct: 752  ECQGNATTHSLQQGQARFKKPNDFGNISFQNNTRLTSGSPANSIHKFAGSGWGCGRGR 809


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