BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00004351
         (2949 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   812   0.0  
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   803   0.0  
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        802   0.0  
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   800   0.0  
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   793   0.0  
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   791   0.0  
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     790   0.0  
gb|ABF94845.1| retrotransposon protein, putative, unclassified [...   788   0.0  
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   786   0.0  
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   785   0.0  
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        776   0.0  
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...   775   0.0  
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...   771   0.0  
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                769   0.0  
emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                759   0.0  
emb|CAJ00277.1| hypothetical protein [Lotus japonicus]                759   0.0  
emb|CAJ00274.1| hypothetical protein [Lotus japonicus]                759   0.0  
gb|ABA97104.1| retrotransposon protein, putative, unclassified [...   758   0.0  
gb|ABF93966.1| retrotransposon protein, putative, unclassified, ...   758   0.0  
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja...   758   0.0  

>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  812 bits (2098), Expect = 0.0
 Identities = 422/844 (50%), Positives = 542/844 (64%), Gaps = 4/844 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN  TIK  F          EL  + +FSK+DLR+GYHQIR+H  DI KT F T  G YE
Sbjct: 623  LNKETIKVKFPIPIVDELLDELHGSTIFSKLDLRSGYHQIRVHPEDIPKTAFRTHEGHYE 682

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            F V+PFGLTNAPTTFQ+LMN I KP+LR F+LVFF DIL+Y  S+ DH HHLQ V DIL 
Sbjct: 683  FLVIPFGLTNAPTTFQSLMNDIFKPYLRKFILVFFYDILVYSKSLADHVHHLQTVLDILK 742

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            ++Q FAK SKC FG  +I+YLG++IS  G+  DP KI+AM++WP P S+K+LRGFLGLTG
Sbjct: 743  QHQLFAKKSKCCFGCSEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTG 802

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYRKF+  YGLIA PLT L KK  FKW E A   F  LK+ +TS PVL L DF+  F ++
Sbjct: 803  YYRKFIKGYGLIAAPLTALLKKNSFKWTESAKRAFQDLKHDVTSPPVLALPDFSIPFTIQ 862

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
             DA   G+GAVLMQ   PLAY S+ +  K L LS YEKE +A++LA++KWR YL+   F 
Sbjct: 863  CDASGIGVGAVLMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFK 922

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRM--DVDEGS 1075
            I++DQ SLKYLLEQK+ TPL  K++TKL+G++F +EYK+G +N+VADALSR   D  EG 
Sbjct: 923  IQTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGK 982

Query: 1076 CLNITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQG 1255
               IT     W+E+L++ Y  D      I               R+GLL YKG+LY+   
Sbjct: 983  LYAITAPANTWLEQLRTXYAIDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPAS 1042

Query: 1256 TELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENR 1435
             ELR +I+  + SS  GGHSG + T+ R  + F W G+R  V   +  CD CQ  K EN 
Sbjct: 1043 KELREQILYLLHSSPQGGHSGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENI 1102

Query: 1436 XXXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASH 1615
                           W  +++DFIE LP S   + I VVVDR +KYAHF  + HPYTAS 
Sbjct: 1103 HPAGLLQPLPIPTKVWTDISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASK 1162

Query: 1616 LAHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERV 1795
            +A  FL   +KLHGLP+SIV+DRD  FTS FW++LFKL G     S+AYHPQTDGQTE V
Sbjct: 1163 IAQVFLANIFKLHGLPNSIVTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIV 1222

Query: 1796 NQCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYL 1975
            N+ +E YLRC     PK W  WL +AE+WYNTN H +  ++PFE++YGY    L   PY 
Sbjct: 1223 NKMVEQYLRCFSGDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVYGYPPPKLI--PYT 1280

Query: 1976 QAT--VVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPY 2149
              T  +  VE+ L+ R  I   L+T+LQ AQ +MK+  D   + R FN+GD V L+L+PY
Sbjct: 1281 PGTTQLQEVENTLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPY 1340

Query: 2150 RQXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDS 2329
            +Q              F GP++VLEK+G+VAY+L+LPP+AKIHPVFHVS LK+K+G    
Sbjct: 1341 KQQSVVQRRNLKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSCLKEKLGERHQ 1400

Query: 2330 ISPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQ 2509
            +   LPP D DG +   P  IL RRL K+ N AV +VL++W  L + EA+W ++  +  +
Sbjct: 1401 LVVTLPPXDKDGVIRXEPEEILHRRLKKKKNHAVTEVLVKWKGLGEDEASWVEYSTLVNE 1460

Query: 2510 FPHL 2521
            FP L
Sbjct: 1461 FPDL 1464


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  803 bits (2075), Expect = 0.0
 Identities = 406/842 (48%), Positives = 545/842 (64%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN+ TIK+ +          EL  A++FSKIDLR+GYHQIR+H +D+ KT F T  G +E
Sbjct: 27   LNASTIKNKYPIPVIEDLLDELQGAQIFSKIDLRSGYHQIRMHAADVHKTAFSTHLGHFE 86

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            + VMPFGLTNAP TFQALMN I  P+LR FVLVFFDDILIY  S  +H  HL +V  +L 
Sbjct: 87   YLVMPFGLTNAPATFQALMNKILAPYLRKFVLVFFDDILIYSKSATEHAQHLSLVLQLLR 146

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
             +Q FAK SKC FGQ Q++YLGYIIS  G+ATDP K+QA+ +WP P S+  LRGFLGL G
Sbjct: 147  HHQLFAKPSKCVFGQDQVEYLGYIISSSGVATDPVKVQAVQNWPTPTSITELRGFLGLAG 206

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+F+ ++G+I +P+ D  KK  F W E     F+ +K  +  APVL + DF+  F++E
Sbjct: 207  YYRRFIKNFGIICRPMFDALKKNNFHWQEVQQQAFDAIKLQLAQAPVLAMPDFSLPFILE 266

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DA   G+GAVLMQ+  PLAY SK +G K   LS Y+KE LAIL A++KW+ Y +    I
Sbjct: 267  ADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALSTYDKEALAILEALKKWKHYFLGTSLI 326

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL 1081
            I++DQ SLKY+ EQ+++  + HK L KL+ +D++IEYKKG +N+ ADALSRM   + + L
Sbjct: 327  IRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQENKAADALSRM--QQLNAL 384

Query: 1082 NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGTE 1261
              TV+ P W+ E+ +SY  D       +     P +    + + G+LRYK  + VG G  
Sbjct: 385  TTTVIVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNT 444

Query: 1262 LRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXX 1441
            LR +++     S++GGHSGE AT QR+   F WPG++  V   V  C  CQ  K E+   
Sbjct: 445  LREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMP 504

Query: 1442 XXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLA 1621
                        AW H+TMDF+E LP S GK+ IWV+VDRFTKYAHF  L HP+TA  + 
Sbjct: 505  AGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQIL 564

Query: 1622 HTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVNQ 1801
              FL+  YKLHGLP+ IVSDRD+IFTS  W+++F+  GV+ H S+AYHPQTDGQ+ERVNQ
Sbjct: 565  TQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQ 624

Query: 1802 CLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYLQA 1981
            CLE+YLRCM ++ P+ W + L  AE+WYNT FHT++ M+P++AL+G K   LA      +
Sbjct: 625  CLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGS 684

Query: 1982 TVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYRQXX 2161
             + G  +  + +  +   +K+HL +AQ++MK   D+H  +R   VGD V LK++PYR   
Sbjct: 685  LLEGERNKQEAKAALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNS 744

Query: 2162 XXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSISPH 2341
                        + GPF+VLE++GSVAYKL LP  ++IH VFHVS LKK +GS       
Sbjct: 745  LGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQLKKHLGSRAVPEQG 804

Query: 2342 LPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQFPHL 2521
            LP  D +G+++  PL +L RRLI R+N  V Q  I WA+L +S ATWED   IT+ FP  
Sbjct: 805  LPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKVFPSF 864

Query: 2522 QP 2527
             P
Sbjct: 865  TP 866


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  802 bits (2072), Expect = 0.0
 Identities = 413/844 (48%), Positives = 540/844 (63%), Gaps = 2/844 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN+ T+K+ F          EL  AKVFSK+DLR+GYHQIR+   DI KT F T  G YE
Sbjct: 746  LNAQTVKNKFPMPIIEDLLDELNGAKVFSKLDLRSGYHQIRMATQDIPKTAFRTHLGHYE 805

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            ++VMPFGLTNAPTTFQ+LMN +  P LR +VLVFFDDILIY     +H  H++ V  +L 
Sbjct: 806  YQVMPFGLTNAPTTFQSLMNQVLAPFLRKYVLVFFDDILIYSKDWAEHKEHIRQVMKVLE 865

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            +N+   K  KCAFG   + YLG+IIS  G+ATDP K++ +  +P P+SV  LR FLG+TG
Sbjct: 866  ENKLVVKLKKCAFGLPSVTYLGHIISQDGVATDPKKVEKIATYPTPKSVTDLRKFLGMTG 925

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+F+ +YG++ +PL D+ KK  F+W    T  F TLK  M ++PVL L DF K FV+E
Sbjct: 926  YYRRFIKNYGIVCRPLHDMLKKEGFQWEREQTEAFETLKTHMCTSPVLSLPDFTKEFVIE 985

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DAC +G+GAVLMQ   PLAYFSK LG K    SIYEKE +AIL A++KWR Y++  + I
Sbjct: 986  ADACGNGIGAVLMQSGRPLAYFSKTLGPKAAAQSIYEKEAMAILEALKKWRHYVLGSRLI 1045

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL 1081
            IK+DQ SLK+++ Q++   + HK L KLM +D+ IEYK G +N VADALSR+   E  C 
Sbjct: 1046 IKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLVADALSRIPPAE-QCQ 1104

Query: 1082 NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGTE 1261
             IT + P W+ ++Q SYE D  A   ++            S   GLLRYKG++YVG+ TE
Sbjct: 1105 AITTVIPEWVRDIQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTE 1164

Query: 1262 LRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXX 1441
            +R  +I+   SS+ GGHSG  AT  R+ + F WPGL+  V   +  C  CQ+ K E+   
Sbjct: 1165 IREELIRSYHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEHIHI 1224

Query: 1442 XXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLA 1621
                        AW H+TMDF+E LP SNGK+ I VVVDR TKYAHF A+ HPYT   + 
Sbjct: 1225 PGLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVV 1284

Query: 1622 HTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVNQ 1801
              F++  ++LHG+P +I++DRD+IFTS  +Q++FK + V+   ST+YHPQTDGQTERVNQ
Sbjct: 1285 ELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQ 1344

Query: 1802 CLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYLQA 1981
            CLESYLR M    P  W SWLA+AE+WYNT +HT+I MTPF+ALYGY    +    +   
Sbjct: 1345 CLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQI--NEFSVP 1402

Query: 1982 TVVGVES--LLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYRQ 2155
              V  E+   ++++  I   LK  L +AQ ++K   DR+ S+R   VGD V LKL+PYRQ
Sbjct: 1403 CNVSEEARVTIEQKDAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQ 1462

Query: 2156 XXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSIS 2335
                          F GPF+++EKVG VAYKLQLP  + IHPVFHVS LKK +GS     
Sbjct: 1463 TAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVPM 1522

Query: 2336 PHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQFP 2515
             +LP    DG++   P+ +L RR+I R  VAV Q L+ W +L  SEATWED   I   FP
Sbjct: 1523 ANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFP 1582

Query: 2516 HLQP 2527
               P
Sbjct: 1583 SFNP 1586


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  800 bits (2067), Expect = 0.0
 Identities = 412/846 (48%), Positives = 557/846 (65%), Gaps = 5/846 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN +T+KDSF          ELG A +FSKIDLRAGYHQ+R+   DI KT F T SG +E
Sbjct: 660  LNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKTAFKTHSGHFE 719

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            + VMPFGLTNAP TFQ LMN I KP LR FVLVFFDDIL+Y SS+ +H  HL+ VF+++ 
Sbjct: 720  YLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQHLKQVFEVMR 779

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
             N+ FAK SKCAF   +++YLG+ IS +GI TDPAKI+A+ +WPQP ++K LRGFLGL G
Sbjct: 780  ANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQPTTLKQLRGFLGLAG 839

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+FV  +G+IA PL  LTK   F+W   A   F  LK A+  APVL L  F+K FVVE
Sbjct: 840  YYRRFVRSFGVIAGPLHALTKTDAFEWTAVAQQAFEDLKAALCQAPVLSLPLFDKQFVVE 899

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DAC  G+GAVLMQ+ HPLAY S+ L  K L LSIYEKE LA++ A+ KWR YL+Q  FI
Sbjct: 900  TDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFI 959

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL 1081
            IK+DQ SLKYLLEQ+++TP+  ++L KL+ FD+ I+Y++G +N VADALSR++  E   +
Sbjct: 960  IKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADALSRVEGSEVLHM 1019

Query: 1082 NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGTE 1261
             +TV++   ++++Q+ Y ND+     IT     P +    S+   +LR K ++ V     
Sbjct: 1020 AMTVVECDLLKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPANDN 1079

Query: 1262 LRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXX 1441
            ++  I+ ++  S +GGHSG + T QRV   F W G+   +   + +C TCQ CK +    
Sbjct: 1080 IKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAAS 1139

Query: 1442 XXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLA 1621
                         W  ++MDFIE LP S GK  I VVVDR +K AHF AL HPY+A  +A
Sbjct: 1140 PGLLQPLPIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVA 1199

Query: 1622 HTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVNQ 1801
            H +LD  +KLHG P+SIVSDRD +FTS FW++ F L GV   L++AYHPQ+DGQTE VN+
Sbjct: 1200 HAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNR 1259

Query: 1802 CLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYG-YKANHLAFGPYL- 1975
            CLE+YLRCMC+  P+ WS WLA+AE+WYNTN+H++  MTPFE +YG     HL   PYL 
Sbjct: 1260 CLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHL---PYLP 1316

Query: 1976 -QATVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYR 2152
             ++ V  V   LQER+ +  +LK HL +AQ +MK+  D+H ++R F +GD+V +KL+PYR
Sbjct: 1317 GESKVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYR 1376

Query: 2153 QXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSI 2332
            Q              + GP++++++ G VAYKL LP  +++HPVFHVS LK  VG+  S 
Sbjct: 1377 QQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLKVLVGNV-ST 1435

Query: 2333 SPHLPPFDDD--GKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITR 2506
            + HLP    D   KV   P  ++ R+++ R   AV +VL++W++    EATWE   D+ +
Sbjct: 1436 TVHLPSVMQDVFEKV---PEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWEFLFDLQK 1492

Query: 2507 QFPHLQ 2524
             FP  +
Sbjct: 1493 TFPEFE 1498


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  793 bits (2047), Expect = 0.0
 Identities = 407/842 (48%), Positives = 543/842 (64%), Gaps = 4/842 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN+ TIK+ +          EL  AKVFSK+DLR+GYHQIR++  DI KT F T  G YE
Sbjct: 498  LNAQTIKNKYPIPVIEDLLDELFGAKVFSKLDLRSGYHQIRMNREDICKTAFNTYLGHYE 557

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            + VMPFGLTNAP TFQ LMN I   +LR F+LVFFDDILIY  +  +H  HL IV  +L 
Sbjct: 558  YLVMPFGLTNAPATFQCLMNSIFAQYLRRFILVFFDDILIYSKNDEEHQEHLTIVLGLLR 617

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            ++Q FAK +KC F   Q+ YLG++IS  G+ATDP KI  +V+WP+PQ +  LR FLG+TG
Sbjct: 618  QHQLFAKLNKCVFAVSQVTYLGHVISGDGVATDPDKISTIVEWPKPQDLTQLRSFLGMTG 677

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+F+ HYG+I +PL D+ +KG F W +     F  LK AMT+APVL L DF++ F +E
Sbjct: 678  YYRRFIRHYGVICRPLYDMLRKGGFDWKDPQDEAFVKLKLAMTTAPVLALPDFSENFTLE 737

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DA  +G+G VLMQ   PLAYFS+ LG++   +S Y++E LAI+ ++++WR Y +  Q I
Sbjct: 738  TDASGTGIGGVLMQRGRPLAYFSRTLGVRAAAMSTYDREALAIIESLKRWRHYFLGTQLI 797

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL 1081
            I++DQ SLK++ +QKV+  + HK + +L+ FD+ IEYKKG +N+VADALSR      S +
Sbjct: 798  IRTDQQSLKFMTDQKVAEGIQHKLMLRLLEFDYTIEYKKGKENKVADALSRRG---NSVM 854

Query: 1082 NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGTE 1261
             I++  P W+E + +SY+NDA     + +    P   S  +   G+LRYKG++YVG+  E
Sbjct: 855  AISIAVPSWIEAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPE 914

Query: 1262 LRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXX 1441
            LR  II  +  S++GGHSG  AT QRV   F WPG++  +H +V  C  CQ  K E+   
Sbjct: 915  LRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHY 974

Query: 1442 XXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLA 1621
                        AW H++MDFIE LP+S GK  I+VVVDRFTKYAH   L HPY+   +A
Sbjct: 975  PGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVA 1034

Query: 1622 HTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVNQ 1801
              F+D  +KLHG P +IVSDRD+IFTS  WQ+LFK + VQ   STAYHPQTDGQTERVNQ
Sbjct: 1035 QAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQ 1094

Query: 1802 CLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYK---ANHLAF-GP 1969
            C+ESYLRCM    PK W SWL +AE+WYNT FHTA+ ++PF+ALYG+     N +A  GP
Sbjct: 1095 CVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPPPLINEVAIPGP 1154

Query: 1970 YLQATVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPY 2149
                        L+E+Q +   LK +L QAQ++MK+  D + S+R   VGD V LK++PY
Sbjct: 1155 EDNE----ARDFLEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQLTVGDMVYLKMQPY 1210

Query: 2150 RQXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDS 2329
            R               F GPF+V+++VG VAY+LQLP    IHPVFH+S LK+  G+   
Sbjct: 1211 RTTAFGLKQALKLTSIFYGPFRVMQRVGKVAYRLQLPEGVGIHPVFHISQLKQHCGANSI 1270

Query: 2330 ISPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQ 2509
             SP LP    DGK+   P  +   R + R++  V Q L++WA+L   +A+WED   I   
Sbjct: 1271 PSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWANLPPEDASWEDASFIKST 1330

Query: 2510 FP 2515
            FP
Sbjct: 1331 FP 1332


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  791 bits (2044), Expect = 0.0
 Identities = 403/846 (47%), Positives = 546/846 (64%), Gaps = 4/846 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN+ T+K+ F          EL  A++FSK+DLR+GYHQIR+   DI KT F T  G YE
Sbjct: 110  LNAQTVKNKFPMPIIEDLLDELHGARIFSKLDLRSGYHQIRMAEEDIPKTAFKTHMGHYE 169

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            ++VMPFGLTNAP TFQ+LMN    P LR FVLVFF DILIY  +  +H  H++ V  +L 
Sbjct: 170  YQVMPFGLTNAPATFQSLMNQALAPFLRKFVLVFFYDILIYSKTREEHIKHIKAVLQVLE 229

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            KNQ   +  KCAFG   + YLG++IS  G+ATDP+KI  +++  +P++V  +R FLG+TG
Sbjct: 230  KNQLVVRLKKCAFGLSSVAYLGHVISSDGVATDPSKISDIMNRKEPKNVTEVREFLGMTG 289

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+F+  YGLI +PL D+ KKG F W    +  F  LK  + ++PVL L +F + FV+E
Sbjct: 290  YYRRFIKGYGLICRPLHDMLKKGGFNWGLAQSEAFTELKGKLCTSPVLALPNFEQPFVIE 349

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DAC  G+GAVLMQ   P+AY+SK LG K    SIYEKE +AIL A+++WR Y++ G+ +
Sbjct: 350  ADACEVGIGAVLMQAGRPIAYYSKALGPKAAAQSIYEKEAMAILEALKRWRHYVLGGELV 409

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGS-- 1075
            IK+DQ SLKY++ Q++   + HK L KLM +++ IEYK G +N VADALSR   ++    
Sbjct: 410  IKTDQQSLKYMMNQRLVEGIQHKLLLKLMEYNYTIEYKAGRENLVADALSRSPKNKEEVT 469

Query: 1076 --CLNITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVG 1249
              C  I V+ P W+ +++ SYE D  A   ++             +  G+++YKG++YVG
Sbjct: 470  ELCAAIAVVVPEWILDIKRSYEEDVQAHKLLSLIGTAGDPEGEYKFEAGIMKYKGRIYVG 529

Query: 1250 QGTELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHE 1429
            +  E+R ++I+   SS+ GGH G  AT QR+   F WPGL+  V + +  C  CQ+ K E
Sbjct: 530  ETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLFYWPGLKKGVENHIRNCPVCQVTKSE 589

Query: 1430 NRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTA 1609
            +               AW H++MDF+E LP S GK+ I VVVDR TKYAHF AL HPYT 
Sbjct: 590  HVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVDRLTKYAHFIALSHPYTV 649

Query: 1610 SHLAHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTE 1789
              +   F+D  +KLHG+P +IV+DRD++FTS F+Q++FK   VQ   STAYHPQTDGQTE
Sbjct: 650  EEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTE 709

Query: 1790 RVNQCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGP 1969
            RVNQCLESYLRCM    P++W SW+A+AE+WYNT +HTAI MTPF+ALYGY    ++   
Sbjct: 710  RVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFS 769

Query: 1970 YLQATVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPY 2149
                        L+E++ I   LK  ++ AQ +MK   DR+ ++R   VGD V LKL+PY
Sbjct: 770  VPCDVSQEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPY 829

Query: 2150 RQXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDS 2329
            RQ              + GPF+VLEKVG+VAY+LQLP +A IHPVFHVS LKK +G+   
Sbjct: 830  RQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAV 889

Query: 2330 ISPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQ 2509
              P+LP    DG++   P+ +L RR+I R+NVAV Q LI W++L  +EATWED   I + 
Sbjct: 890  PMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKV 949

Query: 2510 FPHLQP 2527
            FP+ QP
Sbjct: 950  FPNFQP 955


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  790 bits (2039), Expect = 0.0
 Identities = 406/847 (47%), Positives = 536/847 (63%), Gaps = 5/847 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN+ T+K+ F          EL  A++FSK+DLR+GYHQIR+   D+ KT F T  G YE
Sbjct: 631  LNAQTVKNKFPMPIIEDLLDELNGARIFSKLDLRSGYHQIRMAEKDVHKTAFRTHLGHYE 690

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            ++VMPFGLTN P TFQ+LMNH+  P LR FVLVFFDDILIY  +  +H  H+++V   L 
Sbjct: 691  YQVMPFGLTNDPATFQSLMNHVLAPFLRRFVLVFFDDILIYSKTRAEHLEHVKLVMQALQ 750

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
             N    K  KCAFG   + YLG++IS  G+ATDP K+  + +WP P+ V  +R FLG+TG
Sbjct: 751  DNHLVIKLKKCAFGLASVSYLGHVISQDGVATDPKKVGKIKNWPTPKDVTDVRKFLGMTG 810

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+F+  YG I +P+ D+ KK  F+W    TT F TLK+ + ++PVL L DF++ F +E
Sbjct: 811  YYRRFIQGYGTICRPIHDMLKKNGFQWGADQTTAFETLKHKLRTSPVLALPDFDQAFTIE 870

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DAC  G+GAVLMQ   P+A+FSK LG K  G SIYEKE +AIL A++KWR Y++  + I
Sbjct: 871  ADACGVGIGAVLMQGGRPIAFFSKALGPKAAGQSIYEKEAMAILEALKKWRHYVLGSKLI 930

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEG--- 1072
            IK+DQ SLK+++ Q++   + HK L KLM +D+ IEYK G +N VADALSR+   E    
Sbjct: 931  IKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYTIEYKSGKENLVADALSRLPQKEAVAD 990

Query: 1073 SCLNITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQ 1252
             C  +TV+ P W+ ++Q SYEND  A   ++                GLL+YKG++YVG+
Sbjct: 991  RCHPMTVVIPEWIVDIQRSYENDVQAHKILSLIGTAADPDREYKLEAGLLKYKGRIYVGE 1050

Query: 1253 GTELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHEN 1432
             T++RR++I    SSS GGHSG  AT  R+   F W G+R  V   +  C TCQ+ K E+
Sbjct: 1051 ATDIRRQLITTYHSSSFGGHSGMRATHHRIKMLFYWHGMRGEVERFIRECPTCQITKSEH 1110

Query: 1433 RXXXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTAS 1612
                           AW H+TMDFIE LP S GK+ I VVVDR TKYAHF AL HPY   
Sbjct: 1111 VHIPGLLNPLEIPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFIALAHPYDVE 1170

Query: 1613 HLAHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTER 1792
             +   F++  +KLHG+P  I++DRD+IFTS  +Q++FK + V+   STAYHPQ DGQTER
Sbjct: 1171 QVVEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTER 1230

Query: 1793 VNQCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPY 1972
            VNQCLESYLR M    P  W SWLA+AE+WYNT FHTAI MTPF+A+YGY    +    +
Sbjct: 1231 VNQCLESYLRNMTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQI--NEF 1288

Query: 1973 LQATVVGVES--LLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKP 2146
                 +  E+   ++E++ I + LK  L  AQ +MK   D++ ++R+  VGD V LKLKP
Sbjct: 1289 SVPCNISEEARVTIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKP 1348

Query: 2147 YRQXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTD 2326
            YRQ              F GPF+VL+K+G +AYKLQLP  A+IHPVFHVS LKK +G   
Sbjct: 1349 YRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKKHLGKHA 1408

Query: 2327 SISPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITR 2506
                +LP    DG++   PL +L RR++ R  VAV Q LI W +L  +EATWED   I  
Sbjct: 1409 IPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQA 1468

Query: 2507 QFPHLQP 2527
             FP   P
Sbjct: 1469 MFPSFNP 1475


>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 937

 Score =  788 bits (2035), Expect = 0.0
 Identities = 412/851 (48%), Positives = 533/851 (62%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN+LTIK  F          EL   K FSK+DL+AGYHQIR+  +D +KT F T  G ++
Sbjct: 74   LNALTIKSKFPMPVVDELLDELSGTKFFSKLDLKAGYHQIRMVETDEAKTAFKTHHGQFQ 133

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            F+VMPFGLTNAP+TFQ LMN +  P +R FVLVF DDIL+Y   +  H HHLQ VF IL 
Sbjct: 134  FRVMPFGLTNAPSTFQCLMNSVLAPFIRKFVLVFMDDILVYSPDLDSHLHHLQQVFVILR 193

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            ++Q FA+ SKC+F   Q++YLG+IISDKG++TDP K  AM+ WP P SV  LRGFLGLTG
Sbjct: 194  QHQLFARRSKCSFACTQLEYLGHIISDKGVSTDPEKTAAMLAWPVPTSVTELRGFLGLTG 253

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYRKFV  Y +IA+PLT L KK  F W + A   F+ LK AM++ P+L L +F   F +E
Sbjct: 254  YYRKFVQGYSIIARPLTLLLKKKAFLWTDAAQLAFDQLKTAMSNTPMLALPNFQLPFTLE 313

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DAC  GLGAVL Q  HP+AY+SK LG  N  LSIYEKEFLAI++A++KWR YL +G FI
Sbjct: 314  TDACAYGLGAVLSQQGHPIAYYSKTLGPVNQKLSIYEKEFLAIMMAVDKWRCYLQRGPFI 373

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL 1081
            IK+    L +L +Q + T L  K +TKLMG  +  +YK+GV+N VADALSRM      C 
Sbjct: 374  IKTYHKILCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVNNIVADALSRMPSSSQFCA 433

Query: 1082 NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGTE 1261
              +V+QP+W++E+ +SY  D  A   + E      N    S   G++R++ ++++G    
Sbjct: 434  -FSVVQPIWIQEMINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSNAG 492

Query: 1262 LRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXX 1441
            L  ++I+   +S++GGHSG  AT  R+   F WPGL+  V + V  C  CQ  KHE+   
Sbjct: 493  LHTKLIQAFHASALGGHSGIAATYHRIKKLFAWPGLKLDVENFVKQCQVCQQAKHEHCRL 552

Query: 1442 XXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLA 1621
                        AW  ++MDFIE LP S+G NAI VVVDRFTKYA+F  L HP+TAS +A
Sbjct: 553  PGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFTKYANFIPLRHPFTASQVA 612

Query: 1622 HTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVNQ 1801
            H    T +K HG+P SIVSDRD++FTS FW  LF     Q  +STAYHPQTDGQ ERVNQ
Sbjct: 613  HLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAYHPQTDGQIERVNQ 672

Query: 1802 CLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYLQA 1981
            CLE YLRCM    PK WS W+ +AEFWYNTN+HT +  +P +AL+G   ++        A
Sbjct: 673  CLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTYLGCSPHKALFGVDPHYSQVPDLTLA 732

Query: 1982 TVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYRQXX 2161
            T+  V  +  ERQH+  +L+  L +AQ +MK   D+  SDR F VGD V LKL+PY Q  
Sbjct: 733  TLPDVVDVQTERQHLSEFLQQQLTRAQLRMKNKVDKGRSDRVFAVGDAVFLKLQPYAQSS 792

Query: 2162 XXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSISPH 2341
                        F GPF VLE++G  AY+L LP  + +HPVFHVS LK +V     +   
Sbjct: 793  VVNRPYPKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVFHVSQLKAQVPDHTPVYTS 852

Query: 2342 LPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQFPHL 2521
            LP         + P  IL RRL+KR N A  QVL++W+ L    ATWED+H +  +FP  
Sbjct: 853  LPSQVVLDAADVVPEAILERRLVKRSNAAHVQVLLKWSSLPADHATWEDYHVVKTRFPDA 912

Query: 2522 QP*GQGRSLGG 2554
               GQ  +  G
Sbjct: 913  PAWGQAETPAG 923


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  786 bits (2031), Expect = 0.0
 Identities = 409/843 (48%), Positives = 535/843 (63%), Gaps = 1/843 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN+ TIK+ F          EL  AKVFSK+DLR+GYHQIR+   DI KT F T  G YE
Sbjct: 769  LNAQTIKNKFPMPIIEDLLDELHGAKVFSKLDLRSGYHQIRMAEGDIPKTAFRTHLGHYE 828

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            + VMPFGLTNAP TFQALMN +  P LR FVLVFF DILIY  +  +H  H+++V   L 
Sbjct: 829  YNVMPFGLTNAPATFQALMNQVLAPFLRKFVLVFFADILIYSKTQSEHLEHIKLVMQALS 888

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
             NQ   +  KC FG  ++ YLG+IIS +G++TDP KI  + +   P++V  +R FLG+ G
Sbjct: 889  ANQLVVRLKKCEFGLDRVSYLGHIISSEGVSTDPKKISDIKNRKPPKNVTEVREFLGMAG 948

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+F+  YG+I +PL DL KK  FKW +     F  LK  M ++PVL L DF++ FV+E
Sbjct: 949  YYRRFIKGYGVICRPLHDLLKKDGFKWGDTQQEAFELLKEKMCNSPVLALPDFSQPFVIE 1008

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DAC  G+GAVLMQ   PLAYFSK LG K    S+YEKE +AIL A++KWR Y++ G  I
Sbjct: 1009 TDACGIGIGAVLMQKGRPLAYFSKALGPKAAAQSVYEKEAIAILEALKKWRHYILGGSLI 1068

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRM-DVDEGSC 1078
            IK+DQ SLK+++ Q++   + HK L KLM FD+ IEYK G +N VADALSR  ++ E  C
Sbjct: 1069 IKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYVIEYKSGKENLVADALSRSPNLKEEQC 1128

Query: 1079 LNITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGT 1258
            L ITV+ P W+++++ SYE D  A   ++               +GLL+YKG++YVG+ T
Sbjct: 1129 LPITVVVPEWVQDIKRSYEEDIFAHKILSLIETDGDPERHYKLESGLLKYKGRIYVGETT 1188

Query: 1259 ELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRX 1438
            E+R  +++   +S  GGHSG  AT  R+   F WPGL+  V   +  C TCQ+ K E+  
Sbjct: 1189 EIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQVEHYIRECPTCQITKAEHIH 1248

Query: 1439 XXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHL 1618
                         AW H+TMDFIE LP S GK+ I VVVDR TKYAHF AL HPYT   +
Sbjct: 1249 IPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQV 1308

Query: 1619 AHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVN 1798
               F+D  +KLHG+P  IV+DRD++FTS+F+Q++FK   V+   STA+HPQTDGQTERVN
Sbjct: 1309 VQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVN 1368

Query: 1799 QCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYLQ 1978
            QCLESYLR M    P+ W SWLA+AE+WYNT +HT+I MTPF+ALYGY    +       
Sbjct: 1369 QCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPC 1428

Query: 1979 ATVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYRQX 2158
                     L+++  I   LK+ + +AQ ++K   D+  S+R   +GD V LKL+PYRQ 
Sbjct: 1429 NMSEEARVTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQV 1488

Query: 2159 XXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSISP 2338
                         + GPF+V+EK+G+VAYKLQLP  A IHPVFHVS LKK +G+     P
Sbjct: 1489 AMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQLKKHLGARAIPMP 1548

Query: 2339 HLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQFPH 2518
            +LP    DG++   P  +L RR+I RHN  V Q LI W +L  +EATWED   I   FP+
Sbjct: 1549 NLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWEDASYIQAAFPN 1608

Query: 2519 LQP 2527
             QP
Sbjct: 1609 FQP 1611


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  785 bits (2026), Expect = 0.0
 Identities = 400/846 (47%), Positives = 524/846 (61%), Gaps = 1/846 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN +T+K  +          EL  +K FSK+DLRAGYHQIR+   D  KT F T SG YE
Sbjct: 698  LNDVTVKSKYPVPVIDELLDELAGSKWFSKLDLRAGYHQIRMAEGDEYKTAFQTHSGHYE 757

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            +KVM FGLT AP TF + MN    P LR F LVFFDDILIY  ++  H  H++ V  +L 
Sbjct: 758  YKVMSFGLTGAPATFLSAMNETLSPVLRKFALVFFDDILIYSPTLELHLQHVRTVLQLLS 817

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
             +Q   K SKC+F Q +I YLG++I   G+ATDPAKIQ +V WPQP ++K LRGFLGL G
Sbjct: 818  AHQWKVKLSKCSFAQQEISYLGHVIGAAGVATDPAKIQDVVSWPQPTTIKKLRGFLGLAG 877

Query: 542  YYRKFVLHYGLIAKPLTDLTKKG-QFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVV 718
            YYRKFV H+GLI+KPLT L KKG  FKW     + F  LK A+ +APVL L DF+K F +
Sbjct: 878  YYRKFVRHFGLISKPLTQLLKKGIPFKWTPEIESAFQQLKQALVAAPVLALPDFSKHFTI 937

Query: 719  ESDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQF 898
            E+DA   G+GAVL Q+ HP+AY S+ LG K  GLS YEKE++AI+LA+E WRPYL QG+F
Sbjct: 938  ETDASDVGIGAVLSQEKHPIAYLSRALGPKTRGLSTYEKEYMAIILAVEHWRPYLQQGEF 997

Query: 899  IIKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSC 1078
            II +D HSL +L EQ++ TP   K  TKL+G  ++I Y+KGV N  ADALSR +      
Sbjct: 998  IILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQYKICYRKGVSNAAADALSRRESPISEV 1057

Query: 1079 LNITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGT 1258
              I+   P WM+EL   Y+ D  +   + E    P +        G+L+YKG+++VG  T
Sbjct: 1058 AAISECIPSWMQELMQGYQLDGQSKQLLAELAISPNSRKDYQLCQGILKYKGKIWVGNNT 1117

Query: 1259 ELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRX 1438
             L+ +++  + ++ +GGHSG   T ++V + F WPG++ L+ + + +C  C   K +   
Sbjct: 1118 ALQHKLVNELHATPLGGHSGFPVTYRKVKSLFAWPGMKKLIKEQLQSCQVCLQAKPDRAR 1177

Query: 1439 XXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHL 1618
                         AW  +++DFIE LP S+  N I VVVD+F+KY+HF  L HP+ A  +
Sbjct: 1178 YPGLLQPLPVPAGAWQTISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGV 1237

Query: 1619 AHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVN 1798
            A  F+   YKLHGLP +I+SDRDKIFTS FW QLF   G   H+S+AYHPQ+DGQTERVN
Sbjct: 1238 AQEFMKNIYKLHGLPRAIISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVN 1297

Query: 1799 QCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYLQ 1978
            QCLE YLRC  +  P  WSSWL +AEFWYNT+FH+ +  TPFE LYGY  +H   G    
Sbjct: 1298 QCLEIYLRCFVHAAPHKWSSWLYLAEFWYNTSFHSTLNKTPFEVLYGYTPSHFGIG-LDD 1356

Query: 1979 ATVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYRQX 2158
              +  +     ER+ +Q  L+ HL +AQ +MK   D+  S R F VGDWV LKL+PY Q 
Sbjct: 1357 CQIADLHEWHTERKFMQQLLQQHLNRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQT 1416

Query: 2159 XXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSISP 2338
                         + GPFQV+ +VG+VAY +QLP  + IHPVFHVS LK  VG +  +  
Sbjct: 1417 FVAQRACHKLAFRYYGPFQVMSRVGTVAYHIQLPATSSIHPVFHVSQLKAAVGFSKKVQD 1476

Query: 2339 HLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQFPH 2518
             LP      +V   P   L +RL+K+ N +V Q+L  W H   SE+TWED  D+  +FP 
Sbjct: 1477 ELPTSLGALQV---PFQFLDKRLVKKGNRSVLQLLTHWYHSSPSESTWEDMEDLFARFPR 1533

Query: 2519 LQP*GQ 2536
                GQ
Sbjct: 1534 ALAWGQ 1539


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  776 bits (2004), Expect = 0.0
 Identities = 392/807 (48%), Positives = 524/807 (64%)
 Frame = +2

Query: 107  GYHQIRLHLSDISKTTFVTMSGLYEFKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFF 286
            GYHQIR+H +DI KT F T  G +E+ VMPFGLTNAP TFQALMN I  P+LR FVLVFF
Sbjct: 506  GYHQIRMHPADIYKTAFSTHMGHFEYLVMPFGLTNAPATFQALMNSILAPYLRKFVLVFF 565

Query: 287  DDILIYISSMIDHYHHLQIVFDILLKNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPA 466
            DDILIY  S+ DH  H+++V  +L ++   AK SKC FGQ Q++YLGYIIS+ G+A DP 
Sbjct: 566  DDILIYSPSLSDHVTHVELVLQLLRQHHLSAKPSKCVFGQSQVEYLGYIISNAGVAIDPT 625

Query: 467  KIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTF 646
            K+QA+ +WP P+SV  L GFLGL GYYRKF+  +GLI KPL    KK  F W +     F
Sbjct: 626  KVQAVKNWPVPKSVTDLSGFLGLAGYYRKFIKDFGLICKPLFTALKKTGFTWQDEQQQAF 685

Query: 647  NTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSI 826
             T+K+ +  APVL + +F + F++E+DA  +GLGAVLMQ+N PLAYFSK +G K  GLS 
Sbjct: 686  ATIKDKLAHAPVLAMPNFTQPFILEADASGTGLGAVLMQNNRPLAYFSKAIGPKAAGLST 745

Query: 827  YEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRI 1006
            Y+KE LAIL A++KW+ Y +    II++DQ SLKY+ EQ+++  + HK L KL+ +D++I
Sbjct: 746  YDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRLTEGIQHKLLIKLLSYDYKI 805

Query: 1007 EYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVA*GAITESIAFPF 1186
            EYKKG +N+ ADALSR+        + T++ P W+ E+ +SY  D       ++    P 
Sbjct: 806  EYKKGKENKAADALSRIP-SVAQLFSTTIIVPTWITEILASYATDPKCTALESQLRITPQ 864

Query: 1187 NLSLISYRNGLLRYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPG 1366
                 +  +G+LRYK +LYVG GT+LR ++ +    S++GGHSGE AT QR    F WPG
Sbjct: 865  GHPPYTLTSGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPG 924

Query: 1367 LRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIW 1546
            ++  +   V  C  CQ  K E+               AW H++MDFIE LP S+ K+ IW
Sbjct: 925  MKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIW 984

Query: 1547 VVVDRFTKYAHFFALHHPYTASHLAHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFK 1726
            V+VDRFTKYAHF AL HP+TA  +   F++  YK HGLP+ IVSDRD+IFTS  W+ +F+
Sbjct: 985  VIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQTWKDVFE 1044

Query: 1727 LLGVQQHLSTAYHPQTDGQTERVNQCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTA 1906
              GV+ H S+AYHPQTDGQTERVNQCLE+YLRCM  T PK W S LA A++WYNT+FHT 
Sbjct: 1045 KAGVKLHFSSAYHPQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYAKWWYNTSFHTT 1104

Query: 1907 IAMTPFEALYGYKANHLAFGPYLQATVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATD 2086
            + MTP++AL+G     LA      +      +  + +  I   +K+ L +AQ++MK   D
Sbjct: 1105 LGMTPYQALHGVPPPLLAESFLSPSLFTDARNKAEAKSVITAAIKSSLLKAQARMKHFAD 1164

Query: 2087 RHCSDRHFNVGDWVCLKLKPYRQXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQ 2266
             + ++R   VGD V LK++PYR               + GPF+VLE++GSVAYKL LP  
Sbjct: 1165 MNRTERVLTVGDMVYLKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIGSVAYKLLLPAS 1224

Query: 2267 AKIHPVFHVSILKKKVGSTDSISPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLI 2446
            ++IHPVFHVS LKK +G      P LP  DD+G ++  P  +L RRLI ++N  V Q  +
Sbjct: 1225 SQIHPVFHVSQLKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKV 1284

Query: 2447 RWAHLLDSEATWEDFHDITRQFPHLQP 2527
            +WA+L  S ATWED   I++ FP   P
Sbjct: 1285 QWANLPLSAATWEDAAFISKVFPAFNP 1311


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1548

 Score =  775 bits (2002), Expect = 0.0
 Identities = 410/862 (47%), Positives = 543/862 (62%), Gaps = 11/862 (1%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN LTIK+ F          EL   + FSK+DLR+GYHQIR+  SD  KT F T  G ++
Sbjct: 681  LNDLTIKNKFPLPIVDELLDELAGTQFFSKLDLRSGYHQIRMQESDEFKTAFKTHHGHFQ 740

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            F+VMPFGLTNAP TFQ LMN I  P+LR FVLVF DDIL+Y  S  DH  HL+ V  +L 
Sbjct: 741  FRVMPFGLTNAPATFQCLMNSIFAPYLRKFVLVFMDDILVYSKSWTDHLKHLRCVLQLLQ 800

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            ++Q  AK SKC+F   Q++YLG+IIS  G+ATD  K + M+ WP P ++  LRGFLGLTG
Sbjct: 801  QHQLCAKLSKCSFAAPQLEYLGHIISAAGVATDAEKTKVMLQWPVPTNLTELRGFLGLTG 860

Query: 542  YYRKFVLHYGLIAKPLTDLTKKG-QFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVV 718
            YYRKFV +YG++AKPLT L KK  +F W E     F++LK AM+S PVL L +F K F +
Sbjct: 861  YYRKFVKNYGILAKPLTVLLKKNVKFVWTEHTQKAFDSLKLAMSSTPVLVLPNFAKPFTI 920

Query: 719  ESDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQF 898
            E+DAC +G+GAVL Q+ HP+A++SK LG+ N  LSIYEKEFLAI++AI+KWRPYL++G F
Sbjct: 921  ETDACSTGIGAVLSQEGHPVAFYSKALGINNQKLSIYEKEFLAIMMAIDKWRPYLLRGPF 980

Query: 899  IIKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSC 1078
            +I++D  SL +L +Q + + L  K +TKL+G  ++ +YK+G +N+ ADALSR+     S 
Sbjct: 981  VIRTDHQSLCHLDDQLLGSELQRKAMTKLIGLQYKFQYKRGAENKSADALSRVG-HFFSL 1039

Query: 1079 LNITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGT 1258
              I++ QPVW++E+ +SY  D  A   +TE      N S  S  +GL++ KG++++G  +
Sbjct: 1040 QAISIAQPVWVQEVVNSYVVDNQAQSLLTELAIMSPNASGFSLVHGLIKKKGRIWLGANS 1099

Query: 1259 ELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRX 1438
             L  +II     S++GGHSG  AT  RV   F+W GL+  V + +  C  CQ  KHE+  
Sbjct: 1100 ALHTKIISSFHDSAIGGHSGVMATYHRVKKLFVWKGLKHSVEEFIQQCVVCQKAKHEHCS 1159

Query: 1439 XXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHL 1618
                         AW  ++MDFIE LP S G + I VVVDRFTKYAHF  L HP+TA  +
Sbjct: 1160 SPGLLQPLPIPTGAWQDISMDFIEGLPLSKGSDVILVVVDRFTKYAHFLPLKHPFTAVQV 1219

Query: 1619 AHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVN 1798
            A  +L     L+G+P SIVSDRDKIFTSHFWQ LFK   +  +L+TAYHPQ+DGQTERVN
Sbjct: 1220 ADNYLSKVASLYGMPKSIVSDRDKIFTSHFWQHLFKRFAIPLNLTTAYHPQSDGQTERVN 1279

Query: 1799 QCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANH-LAFGPYL 1975
            QCLE YLRC   + P  WSSWL +A++WYNT+FH+A+  +P +ALYG    + L   P  
Sbjct: 1280 QCLEMYLRCAVASAPTKWSSWLPLAQYWYNTSFHSALKCSPHKALYGTDPTYGLLPAPLT 1339

Query: 1976 QAT---------VVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWV 2128
                          GV +LL+ER+     L+ HL + Q++MK+  D   + R F VGD V
Sbjct: 1340 DDAEQTSDDIDDSSGVSALLKERELFSTMLQHHLARDQNRMKQFADAKRTARSFQVGDLV 1399

Query: 2129 CLKLKPYRQXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKK 2308
             LKL+PY Q              + GPF++L  VGSVAY+L+LP  + IHPVFHVS LK 
Sbjct: 1400 LLKLQPYAQRSVIARPFPKLAFKYFGPFEILAVVGSVAYRLKLPADSLIHPVFHVSQLKS 1459

Query: 2309 KVGSTDSISPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWED 2488
             V  T  +   LP         L P  +L RRL+K+ N A+ QVL++W  L  + ATWED
Sbjct: 1460 FVPDTKPVFAQLPTAAQLDIADLIPSAVLERRLVKKGNAAIVQVLVQWGSLPPALATWED 1519

Query: 2489 FHDITRQFPHLQP*GQGRSLGG 2554
            +  +  +FP     GQ    GG
Sbjct: 1520 YDVVRTRFPDAVAWGQAPIGGG 1541


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  771 bits (1990), Expect = 0.0
 Identities = 392/855 (45%), Positives = 541/855 (63%), Gaps = 4/855 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN++T+K+ +          EL  A+ FSK+DLR+GYHQIR+H  D  KT F T  G +E
Sbjct: 738  LNAITVKNKYPLPVIDELLDELAGAQWFSKLDLRSGYHQIRMHPDDEHKTAFQTHHGHFE 797

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            F+V+PFGLT+AP TFQ +MN +    LR  VLVF DDILIY  S+ +H  HL+ VF ILL
Sbjct: 798  FRVLPFGLTSAPATFQGVMNSVLATLLRRCVLVFVDDILIYSKSLEEHVQHLKTVFQILL 857

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            K+Q   K +KC+F Q ++ YLG+II   G++TDP KIQ +  WP P SVK LR FLGL+G
Sbjct: 858  KHQLKVKRTKCSFAQQELAYLGHIIQPNGVSTDPEKIQVIQHWPAPTSVKELRSFLGLSG 917

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQ-FKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVV 718
            YYRKFV +YG+++KPLT+L +KGQ + W       F  LK A+ +A VL + DF   FVV
Sbjct: 918  YYRKFVRNYGILSKPLTNLLRKGQLYIWTAETEDAFQALKQALITALVLAMPDFQTPFVV 977

Query: 719  ESDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQF 898
            E+DA   G+GAVLMQ+NHPLA+ S+ LGL++ GLS YEKE LAI+LA++ WRPYL   +F
Sbjct: 978  ETDASDKGIGAVLMQNNHPLAFLSRALGLRHPGLSTYEKESLAIMLAVDHWRPYLQHDEF 1037

Query: 899  IIKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRM---DVDE 1069
             I++D  SL +L EQ+++TP  HK LTKL+G  ++I +KKG+DN  ADALSR    D  E
Sbjct: 1038 FIRTDHRSLAFLTEQRLTTPWQHKALTKLLGLRYKIIFKKGIDNSAADALSRYPGSDRVE 1097

Query: 1070 GSCLNITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVG 1249
             S L++ V  P W+ ++ + Y +D  A   +         +   S RNG+L ++ +L+VG
Sbjct: 1098 LSALSVAV--PEWINDIVAGYSSDPDACSKVQTLCINSGAVPNFSLRNGVLYFQNRLWVG 1155

Query: 1250 QGTELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHE 1429
               ++++RI+  + ++++GGHSG   T QRV   F WP LR+ V   V  C  CQ  K E
Sbjct: 1156 HNVDVQQRILANLHTAAVGGHSGIQVTYQRVKQLFAWPRLRATVVQYVQACSVCQQAKSE 1215

Query: 1430 NRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTA 1609
            +               AW  +++DF+E LP S   N I VVVD+F+KY+HF  L HP++A
Sbjct: 1216 HVKYPGMLQPLPVPDHAWQIVSLDFVEGLPKSASFNCILVVVDKFSKYSHFVPLTHPFSA 1275

Query: 1610 SHLAHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTE 1789
              +A  ++   ++LHGLP S++SDRD+IFTS  W  LF+L G Q  +S++YHPQTDGQTE
Sbjct: 1276 LDVAEAYMQHIHRLHGLPQSLISDRDRIFTSTLWTTLFRLAGTQLRMSSSYHPQTDGQTE 1335

Query: 1790 RVNQCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGP 1969
            RVNQCLE++LRC  +  P  WS WLA+AE+WYNT+FH+A+  TPFE LYG+K  +     
Sbjct: 1336 RVNQCLETFLRCFVHACPSQWSRWLALAEYWYNTSFHSALGTTPFEVLYGHKPRYFGLSA 1395

Query: 1970 YLQATVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPY 2149
                    +   L ER+ +Q  ++ HL +AQ++MK+  D+H S+R F VGDWV LKL+P+
Sbjct: 1396 SAACRSDDLVEWLHEREKMQALIRDHLLRAQTRMKQQADQHRSERSFAVGDWVYLKLQPF 1455

Query: 2150 RQXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDS 2329
             Q              F GPFQVL+KVG+VAY+L LP  + IHPV HVS LKK +  T+ 
Sbjct: 1456 VQQSVVTRANRKLSFRFYGPFQVLDKVGTVAYRLDLPSSSLIHPVVHVSQLKKALAPTEQ 1515

Query: 2330 ISPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQ 2509
            +   LP  D      + P  IL RR I++ +  V Q+ +RW     +  TWE+  ++ R+
Sbjct: 1516 VHSPLPVLDPTNATHVCPAQILDRRFIRKGSKLVEQIQVRWTGDAPAATTWENPQELRRR 1575

Query: 2510 FPHLQP*GQGRSLGG 2554
            FP     GQ  + GG
Sbjct: 1576 FPTAPAWGQAGTQGG 1590


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score =  770 bits (1987), Expect = 0.0
 Identities = 397/852 (46%), Positives = 527/852 (61%), Gaps = 2/852 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN++T+K  +          EL  AK F+K+DLR+GYHQIR+   +  KT F T SG YE
Sbjct: 681  LNNITVKTKYPVPVIEELLDELTGAKWFTKLDLRSGYHQIRMAEGEEPKTAFQTHSGHYE 740

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            +KVM FGLT AP TF   MN   K  LR F LVFFDDILIY  ++  H  HL+ V  +L 
Sbjct: 741  YKVMSFGLTGAPATFLKAMNDTLKSVLRKFALVFFDDILIYSPTLSSHLEHLKQVLQLLR 800

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
             +    K SKC+FGQ Q+ YLG+II   G+ATDP+K+Q ++DW  P S K LRGFLGL G
Sbjct: 801  NHHWKVKLSKCSFGQQQLSYLGHIIGVNGVATDPSKVQDVLDWAVPVSTKKLRGFLGLAG 860

Query: 542  YYRKFVLHYGLIAKPLTDLTKKG-QFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVV 718
            YYRKFV ++G+I+KPLT L +KG  + W       F+TLK A+ SAPVL L DF KTF V
Sbjct: 861  YYRKFVKNFGIISKPLTQLLRKGVPYVWTTETDNAFHTLKQALASAPVLSLPDFQKTFTV 920

Query: 719  ESDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQF 898
            E+DA   G+GAVL QD HP+AY SK LG +  GLS YEKE +AILLA++ WR YL  G+F
Sbjct: 921  ETDASDCGIGAVLSQDKHPIAYVSKALGPRTRGLSTYEKECMAILLAVDHWRSYLQHGEF 980

Query: 899  IIKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGS- 1075
            II +D HSL +L +Q++ TP  HK  TKL+G  ++I Y+KG  N  ADALSR   D  S 
Sbjct: 981  IILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSSNAAADALSRKFQDSNSE 1040

Query: 1076 CLNITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQG 1255
               I+   P W+ E+   YE DA A   ++     P         NG++RYK +++VG  
Sbjct: 1041 IFAISSSVPQWLMEVTQGYEKDAQAAKLLSTLAIHPEKHIHYFLDNGIIRYKNRIWVGNN 1100

Query: 1256 TELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENR 1435
             EL+ ++I+ + +S +GGHSG   T +++   F WP ++ ++ + V  C  C   K +  
Sbjct: 1101 PELQLKLIRELHASPVGGHSGFPVTYRKIKQLFAWPNMKKMIKESVQRCQVCLQAKPDRL 1160

Query: 1436 XXXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASH 1615
                          +W  +++DFIE LP S G N I VVVDRF+KYAHF AL HP+TA  
Sbjct: 1161 KYPGLLQPLPVPEGSWQAVSLDFIEGLPKSAGYNCILVVVDRFSKYAHFVALKHPFTAID 1220

Query: 1616 LAHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERV 1795
            +A  ++   YKLHGLP +IVSDRDKIFTS  W+QLF   G + H S+AYHPQ+DGQTERV
Sbjct: 1221 VAQAYMFHIYKLHGLPQTIVSDRDKIFTSQLWEQLFLRAGTKLHYSSAYHPQSDGQTERV 1280

Query: 1796 NQCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYL 1975
            NQCLE YLRC  ++TP  W SWL +AE+WYN+ +H+++  TPFE LYGY  NH       
Sbjct: 1281 NQCLEIYLRCFVHSTPSKWYSWLHLAEYWYNSTYHSSLGTTPFEVLYGYPPNHFGISS-R 1339

Query: 1976 QATVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYRQ 2155
               +  +   L++R+ +Q  ++ HL +AQ +MK   D+  S R F +GDWV LKL+PY Q
Sbjct: 1340 DCAIPELSVWLRDRKFMQQLVQQHLHRAQQQMKHFADKKRSFRQFTIGDWVYLKLQPYVQ 1399

Query: 2156 XXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSIS 2335
                          + GPFQV++K+G+VAYKLQLP  + +HPVFHVS+LK   G T    
Sbjct: 1400 SSVAPRANHKLAFKYYGPFQVIDKLGTVAYKLQLPETSSVHPVFHVSLLKPAKGFTQPAF 1459

Query: 2336 PHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQFP 2515
              LP      ++   PL IL +RL K+ N  + QVLI W+H +  +ATWED  D+  +FP
Sbjct: 1460 LQLPSEVVSWQL---PLAILDQRLAKKGNSVITQVLIHWSHTVPEQATWEDLEDLKTRFP 1516

Query: 2516 HLQP*GQGRSLG 2551
            +    GQ +  G
Sbjct: 1517 NALAWGQAKIQG 1528


>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  759 bits (1960), Expect = 0.0
 Identities = 394/845 (46%), Positives = 538/845 (63%), Gaps = 7/845 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN +T+K  F          ELG AK+FSK+DLRAGYHQ+R+   D+ KT F T SG YE
Sbjct: 656  LNDMTVKAKFPIPLVEDLLDELGGAKIFSKLDLRAGYHQLRMRPEDVEKTAFQTHSGQYE 715

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            + VMPFGLTNAP+TFQ  MN I  P LR  VL+FFDDIL+Y +++  H  HL+ VF +L 
Sbjct: 716  YVVMPFGLTNAPSTFQGAMNAIFAPFLRKSVLIFFDDILVYSATVEAHLQHLREVFAVLR 775

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            K+  + K SKCAF    I+YLG+ IS  G++TD  KI+A+ DWP+P ++K LRGFLGLTG
Sbjct: 776  KHSFYVKRSKCAFFTPVIEYLGHFISASGVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTG 835

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+F+  Y ++A PLTDL +K  F W   A+  F  LKNA+  APVL + D  K F VE
Sbjct: 836  YYRRFIKGYSILASPLTDLLRKDGFHWSAAASAAFLQLKNALVQAPVLAIPDLQKPFTVE 895

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DA  +G+GAVL+QD HP+A+ SK L  +N  LS+Y++E LA++ A+ KW  YL   QF 
Sbjct: 896  TDASSTGIGAVLLQDKHPVAFISKVLSPRNRLLSVYDRELLALVHAVTKWHQYLAIQQFT 955

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL 1081
            I +DQ SLK+LLEQ++STP  ++++TKLMG  + I+YK+G +N VADALSR    E   L
Sbjct: 956  ILTDQQSLKFLLEQRLSTPAQYRWVTKLMGLSYVIQYKRGKENVVADALSRASHGELFQL 1015

Query: 1082 NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGTE 1261
            +++ +       L  +Y  D      I++ +A P   +  S  +G L  K +L +   ++
Sbjct: 1016 SVSSVSSELWGLLTQAYAADEALQQLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQ 1075

Query: 1262 LRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXX 1441
            +R  I++++ SS  GGHSG  ATV R+ + F W GL   V D +  C+TC  CK+E    
Sbjct: 1076 VRTLILEWLHSSHQGGHSGIRATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVAS 1135

Query: 1442 XXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLA 1621
                         W  + MDFI++LP S+GK+AIWVV+DR +KYAHF  L HPYTAS LA
Sbjct: 1136 PGLLQPLPIPAGVWQSIAMDFIDKLPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLA 1195

Query: 1622 HTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVNQ 1801
              F+   Y+LHG PS+IVSDRD +FTS FW    + LG+ Q L+TAYHPQ+DGQ+E +N+
Sbjct: 1196 EIFIKEVYRLHGAPSNIVSDRDPLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNR 1255

Query: 1802 CLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGY-KANHLAFGPYLQ 1978
            CLE YLR M    PK W +WL +AE+WYNT +H+AI  TP+E +YG   A HL + P  Q
Sbjct: 1256 CLEHYLRAMTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQPPAIHLPYCP--Q 1313

Query: 1979 ATVV-GVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYRQ 2155
            +T+V  V+     R+ +   L  +L +AQ++MK   D+H +DR F+VGDWV LKL+PYRQ
Sbjct: 1314 STIVDAVDRSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQ 1373

Query: 2156 XXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSIS 2335
                          F GP+QVL +VG VAY L LPP++KIHP FHVS+LK          
Sbjct: 1374 SSTQHRASEKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLLKP---CPSPAM 1430

Query: 2336 PHLP-PFD----DDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDI 2500
            PH+P P +    D  K    P  IL RR+++R + AV +VL++W   ++ EATWE  +++
Sbjct: 1431 PHVPLPLEWGNLDQPKA---PFKILKRRMVQRRHKAVTEVLVQWLGEMEEEATWEVLYNL 1487

Query: 2501 TRQFP 2515
              ++P
Sbjct: 1488 KLKYP 1492


>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  759 bits (1959), Expect = 0.0
 Identities = 394/845 (46%), Positives = 538/845 (63%), Gaps = 7/845 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN +T+K  F          ELG AK+FSK+DLRAGYHQ+R+   D+ KT F T SG YE
Sbjct: 656  LNDMTVKAKFPIPLVEYLLDELGGAKIFSKLDLRAGYHQLRMRPEDVEKTAFQTHSGQYE 715

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            + VMPFGLTNAP+TFQ  MN I  P LR  VL+FFDDIL+Y +++  H  HL+ VF +L 
Sbjct: 716  YVVMPFGLTNAPSTFQGAMNAIFAPFLRKSVLIFFDDILVYSATVEAHLQHLREVFAVLR 775

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            K+  + K SKCAF    I+YLG+ IS  G++TD  KI+A+ DWP+P ++K LRGFLGLTG
Sbjct: 776  KHSFYVKRSKCAFFTPVIEYLGHFISASGVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTG 835

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+F+  Y ++A PLTDL +K  F W   A+  F  LKNA+  APVL + D  K F VE
Sbjct: 836  YYRRFIKGYSILASPLTDLLRKDGFHWSAAASAAFLQLKNALVQAPVLAIPDLQKPFTVE 895

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DA  +G+GAVL+QD HP+A+ SK L  +N  LS+Y++E LA++ A+ KW  YL   QF 
Sbjct: 896  TDASSTGIGAVLLQDKHPVAFISKVLSPRNRLLSVYDRELLALVHAVTKWHQYLAIQQFT 955

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL 1081
            I +DQ SLK+LLEQ++STP  ++++TKLMG  + I+YK+G +N VADALSR    E   L
Sbjct: 956  ILTDQQSLKFLLEQRLSTPAQYRWVTKLMGLSYVIQYKRGKENVVADALSRASHGELFQL 1015

Query: 1082 NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGTE 1261
            +++ +       L  +Y  D      I++ +A P   +  S  +G L  K +L +   ++
Sbjct: 1016 SVSSISSELGGLLTQAYAADEALQQLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQ 1075

Query: 1262 LRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXX 1441
            +R  I++++ SS  GGHSG  ATV R+ + F W GL   V D +  C+TC  CK+E    
Sbjct: 1076 VRTLILEWLHSSHQGGHSGIRATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVAS 1135

Query: 1442 XXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLA 1621
                         W  + MDFI++LP S+GK+AIWVV+DR +KYAHF  L HPYTAS LA
Sbjct: 1136 PGLLQPLPIPAGVWQSIAMDFIDKLPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLA 1195

Query: 1622 HTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVNQ 1801
              F+   Y+LHG PS+IVSDRD +FTS FW    + LG+ Q L+TAYHPQ+DGQ+E +N+
Sbjct: 1196 EIFIKEVYRLHGAPSNIVSDRDPLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNR 1255

Query: 1802 CLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGY-KANHLAFGPYLQ 1978
            CLE YLR M    PK W +WL +AE+WYNT +H+AI  TP+E +YG   A HL + P  Q
Sbjct: 1256 CLEHYLRAMTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQPPAIHLPYCP--Q 1313

Query: 1979 ATVV-GVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYRQ 2155
            +T+V  V+     R+ +   L  +L +AQ++MK   D+H +DR F+VGDWV LKL+PYRQ
Sbjct: 1314 STIVEAVDRSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQ 1373

Query: 2156 XXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSIS 2335
                          F GP+QVL +VG VAY L LPP++KIHP FHVS+LK          
Sbjct: 1374 SSTQHRASEKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLLKP---CPSPAM 1430

Query: 2336 PHLP-PFD----DDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDI 2500
            PH+P P +    D  K    P  IL RR+++R + AV +VL++W   ++ EATWE  +++
Sbjct: 1431 PHVPLPLEWGNLDQPKA---PFKILKRRMVQRRHKAVTEVLVQWLGEMEEEATWEVLYNL 1487

Query: 2501 TRQFP 2515
              ++P
Sbjct: 1488 KLKYP 1492


>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  759 bits (1959), Expect = 0.0
 Identities = 392/842 (46%), Positives = 537/842 (63%), Gaps = 4/842 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN +T+K  F          ELG AK+FSK+DLRAGYHQ+R+   D+ KT F T SG YE
Sbjct: 656  LNDMTVKAKFPIPLVEDLLDELGGAKIFSKLDLRAGYHQLRMRPEDVEKTAFQTHSGQYE 715

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            + VMPFGLTNAP+TFQ  MN I  P LR  VL+FFDDIL+Y +++  H  HL+ VF +L 
Sbjct: 716  YVVMPFGLTNAPSTFQGAMNAIFAPFLRKSVLIFFDDILVYSATVEAHLQHLREVFAVLR 775

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            K+  + K SKCAF    I+YLG+ IS  G++TD  KI+A+ DWP+P ++K LRGFLGLTG
Sbjct: 776  KHSFYVKRSKCAFFTPVIEYLGHFISASGVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTG 835

Query: 542  YYRKFVLHYGLIAKPLTDLTKKGQFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVE 721
            YYR+F+  Y ++A PLTDL +K  F W   A+  F  LKNA+  APVL + D  K F VE
Sbjct: 836  YYRRFIKGYSILASPLTDLLRKDGFHWSAAASAAFLQLKNALVQAPVLAIPDLQKPFTVE 895

Query: 722  SDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFI 901
            +DA  +G+GAVL+QD HP+A+ SK L  +N  LS+Y++E LA++ A+ KW  YL   QF 
Sbjct: 896  TDASSTGIGAVLLQDKHPVAFISKVLSPRNRLLSVYDRELLALVHAVTKWHQYLAIQQFT 955

Query: 902  IKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL 1081
            I +DQ SLK+LLEQ++STP  ++++TKLMG  + I+YK+G +N VADALSR    E   L
Sbjct: 956  ILTDQQSLKFLLEQRLSTPAQYRWVTKLMGLSYVIQYKRGKENVVADALSRASHGELFQL 1015

Query: 1082 NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQGTE 1261
            +++ +       L  +Y  D      I++ +A P   +  S  +G L  K +L +   ++
Sbjct: 1016 SVSSISSELWGLLTQAYAADEALQQLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQ 1075

Query: 1262 LRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXX 1441
            +R  I++++ SS  GGHSG  ATV R+ + F W GL   V D +  C+TC  CK+E    
Sbjct: 1076 VRTLILEWLHSSHQGGHSGIRATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVAS 1135

Query: 1442 XXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLA 1621
                         W  + MDFI++LP S+GK+AIWVV+DR +KYAHF  L HPYTAS LA
Sbjct: 1136 PGLLQPLPIPAGVWQSIAMDFIDKLPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLA 1195

Query: 1622 HTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERVNQ 1801
              F+   Y+LHG PS+IVSDRD +FTS FW    + LG+ Q L+TAYHPQ+DGQ+E +N+
Sbjct: 1196 EIFIKEVYRLHGAPSNIVSDRDPLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNR 1255

Query: 1802 CLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGY-KANHLAFGPYLQ 1978
            CLE YLR M    PK W +WL +AE+WYNT +H+AI  TP+E +YG   A HL + P  Q
Sbjct: 1256 CLEHYLRAMTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQPPAIHLPYCP--Q 1313

Query: 1979 ATVV-GVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYRQ 2155
            +T+V  V+     R+ +   L  +L +AQ++MK   D+H +DR F+VGDWV LKL+PYRQ
Sbjct: 1314 STIVEAVDRSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQ 1373

Query: 2156 XXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSIS 2335
                          F GP+QVL +VG VAY L LPP++KIHP FHVS+LK          
Sbjct: 1374 SSTQHRASEKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLLKP---CPSPAM 1430

Query: 2336 PHLPPFDDDGKV--ILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQ 2509
            PH+P   + G +     P  IL RR+++R + AV +VL++W   ++ EATWE  +++  +
Sbjct: 1431 PHVPLPLEWGNLDQPTAPFKILKRRMVQRRHKAVTEVLVQWLGEMEEEATWEVLYNLKLK 1490

Query: 2510 FP 2515
            +P
Sbjct: 1491 YP 1492


>gb|ABA97104.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1412

 Score =  758 bits (1956), Expect = 0.0
 Identities = 400/821 (48%), Positives = 517/821 (62%), Gaps = 3/821 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LNS+T+K  F          EL  +KVFSK+DLRAGYHQIRL   +  KTTF T SG YE
Sbjct: 590  LNSITMKGKFPMPVIDELLDELSGSKVFSKLDLRAGYHQIRLVEGEEHKTTFQTHSGHYE 649

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            ++VM FGLT AP TFQ  MN    P LR F LVFFDDIL+Y   ++ H HHL+ V  +L 
Sbjct: 650  YRVMSFGLTGAPATFQGAMNDTLAPVLRKFALVFFDDILVYSPDLVSHVHHLRQVLQLLT 709

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
            ++Q   K SKC+F QHQ+ YLG+IISD+ + TDPAKI+ +V+W  P+ VK LRGFLGL G
Sbjct: 710  EHQWKVKLSKCSFAQHQLSYLGHIISDQRVTTDPAKIEEVVNWAVPKFVKKLRGFLGLAG 769

Query: 542  YYRKFVLHYGLIAKPLTDLTKKG-QFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVV 718
            YYRKFV  +G++ +PLT+L KK   F W   A   F  LK A+ SAPVL L DF+  F +
Sbjct: 770  YYRKFVKQFGILCRPLTNLLKKDVPFVWSVEADQAFKALKQALVSAPVLSLPDFSLPFTI 829

Query: 719  ESDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQF 898
            E+DA   G+GAVL Q  HP+A+ SK LG+K  GLS YEKE+LAILLA++ WR YL Q +F
Sbjct: 830  ETDASDEGIGAVLSQCGHPIAFLSKALGVKTKGLSTYEKEYLAILLAVDHWRSYLQQQEF 889

Query: 899  IIKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSC 1078
            +I +D HSL +L EQ++ TP  HK  TKL+G  F+I Y+KG  N  A+ALSR   +E S 
Sbjct: 890  VILTDHHSLMHLNEQRLHTPWQHKAFTKLLGLQFKICYRKGSSNAAANALSRKYPEELSE 949

Query: 1079 LNI-TVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQG 1255
            L++ +   PVW++E+   Y  D  +   +T+      +    S  NG+LR+KG++++   
Sbjct: 950  LHVVSSCSPVWLQEVSDGYLQDVFSAQLLTDLTLNAESRPNFSLCNGVLRFKGRVWIDNN 1009

Query: 1256 TELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENR 1435
              ++ +II  + SS +GGHSG   T  ++ + F WP ++  +H  V TC  C   K ++ 
Sbjct: 1010 PSVQDKIISALHSSPLGGHSGFPVTYSKIKSLFAWPKMKKQIHTAVKTCGICMQAKPDHS 1069

Query: 1436 XXXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASH 1615
                          AW  +TMDFIE LP S   N I VVVD+F+KY+HFF L HP++A  
Sbjct: 1070 KYPGLLQPLPVPDGAWQIITMDFIEGLPKSGQFNCILVVVDKFSKYSHFFPLSHPFSAID 1129

Query: 1616 LAHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERV 1795
            +A +F+   YKLHGLP  I+SDRDKI TSHFW+QLF   G Q  LSTAYH QTD QTERV
Sbjct: 1130 VAQSFMVNVYKLHGLPKFIISDRDKILTSHFWEQLFLRTGTQLQLSTAYHLQTDEQTERV 1189

Query: 1796 NQCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYL 1975
            NQCLE YLRC  +  P  WSSWL +AEFW+NT++H+AI  +PFEALYGY   H  FG   
Sbjct: 1190 NQCLEIYLRCFVHAVPHKWSSWLYLAEFWFNTSYHSAILQSPFEALYGYPPGH--FGIRD 1247

Query: 1976 QA-TVVGVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYR 2152
             A +V  +   L ER+ +   LK HL +AQ +MK   D+ CS R F+  DWV LKL+PY 
Sbjct: 1248 DACSVPDLHEWLNERKVMTQLLKQHLNRAQQQMKLYADKKCSFREFSNVDWVYLKLQPYI 1307

Query: 2153 QXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSI 2332
            Q              + GPFQVL +VG VAYKL L  ++ IHPVFHVS LK  VG   S+
Sbjct: 1308 QSSVAKRANHKLSFRYFGPFQVLYRVGKVAYKLSLSAESSIHPVFHVSQLKHAVGFRHSV 1367

Query: 2333 SPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWA 2455
             P LP   D    +  P+ +LA R I++ N    QVLIRW+
Sbjct: 1368 QPCLPACSD----LKVPVAVLASRQIRKGNSVKAQVLIRWS 1404


>gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1920

 Score =  758 bits (1956), Expect = 0.0
 Identities = 399/853 (46%), Positives = 522/853 (61%), Gaps = 3/853 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN++TIK  +          EL  AK FSK+DLRAGYHQIRL   +  KT F T SG YE
Sbjct: 134  LNAITIKGKYPLPVIDELLDELSGAKYFSKLDLRAGYHQIRLQPGEEHKTAFQTHSGHYE 193

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            ++VM FGLT AP TFQ  MN      LR F LVFFDDILIY   +  H  HL+ V  +L 
Sbjct: 194  YRVMSFGLTGAPATFQKAMNDTLATVLRKFTLVFFDDILIYSPDLPSHIQHLEQVLQLLQ 253

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
              Q   K SKC+F Q Q+ YLG+II   G+ TDP+KI  ++ W  PQSVK LRGFLGL G
Sbjct: 254  AQQWKVKLSKCSFAQQQLAYLGHIIGKDGVTTDPSKIADVLHWKIPQSVKQLRGFLGLAG 313

Query: 542  YYRKFVLHYGLIAKPLTDLTKKG-QFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVV 718
            YYRKFV ++G I KPLT L KKG  FKW       FN LK A+ SAPVL L DF+KTF V
Sbjct: 314  YYRKFVRNFGTINKPLTQLLKKGVPFKWTAQMDEAFNALKQALVSAPVLALPDFSKTFTV 373

Query: 719  ESDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQF 898
            E+DAC  G+GAVL QD HP+A+ SK LG K  GLS YEKE+LAILLA+++WR YL   +F
Sbjct: 374  ETDACDMGIGAVLSQDRHPIAFVSKALGPKTRGLSTYEKEYLAILLAVDQWRSYLQHDEF 433

Query: 899  IIKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSC 1078
            +I +D H+L ++ +Q++ TPL HK  TKLMG  +++ Y++G  N  ADALSR D +    
Sbjct: 434  VILTDHHNLMHITDQRLHTPLQHKAFTKLMGLQYKVCYRRGTSNAAADALSRRDEETNDQ 493

Query: 1079 L-NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQG 1255
            L  ++  QP+W+  +   YE D  A   +TE    P          G+LRYKG++++G  
Sbjct: 494  LWAVSECQPLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQGVLRYKGKIWIGHN 553

Query: 1256 TELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENR 1435
              L+++++  + +S +GGHSG   T QRV   F WP ++ ++   V  C  CQ  K +  
Sbjct: 554  LSLQQQLVTALHASPIGGHSGFPVTYQRVKALFAWPQMKKMIQQWVKNCTICQQAKPDLA 613

Query: 1436 XXXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASH 1615
                          AW  +++DFIE LP S   N I VVVD+F++YAHF  L HP++A  
Sbjct: 614  KYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFSRYAHFVPLSHPFSALD 673

Query: 1616 LAHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERV 1795
            +A +++   YKLHG+P  ++SDRDKIFTS  W+ LF   G+  HLS+AYHPQ+DGQT+RV
Sbjct: 674  VAVSYMKNIYKLHGMPKVLISDRDKIFTSKLWEFLFLKSGIALHLSSAYHPQSDGQTKRV 733

Query: 1796 NQCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYL 1975
            NQCLE +LRC  N  P  W +WL +A +WYNT FH+A+  TPFE LYG+  N L  G  +
Sbjct: 734  NQCLEMFLRCFTNAAPFKWVTWLHLAGYWYNTCFHSALNKTPFEVLYGH--NPLQLGVTM 791

Query: 1976 QATVV-GVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYR 2152
            +   +  +   L ER+ +   L+ HL + Q KMK   D++ S R F VGDWV LKL+PY 
Sbjct: 792  ETCAIPDLAVWLHERKLMAELLQQHLHRVQQKMKFHADKNRSFREFAVGDWVFLKLQPYV 851

Query: 2153 QXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSI 2332
            Q              F GPFQ+L +VG+VAYKLQLP  + IHPVFHVS LK   G    +
Sbjct: 852  QKSVASRACHKLAFKFYGPFQILARVGTVAYKLQLPDDSTIHPVFHVSQLKVAHGFKHQV 911

Query: 2333 SPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQF 2512
               LP F    K  ++PL IL +RLI++ N  V QVL+ W+  +  +ATWED  D+ ++F
Sbjct: 912  QSRLPKF---LKSTVYPLQILDQRLIRKGNRTVSQVLVYWSDSVAEDATWEDREDLQQRF 968

Query: 2513 PHLQP*GQGRSLG 2551
            P     GQ    G
Sbjct: 969  PMALAWGQATFQG 981


>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1923

 Score =  758 bits (1956), Expect = 0.0
 Identities = 399/853 (46%), Positives = 522/853 (61%), Gaps = 3/853 (0%)
 Frame = +2

Query: 2    LNSLTIKDSFXXXXXXXXXXELGQAKVFSKIDLRAGYHQIRLHLSDISKTTFVTMSGLYE 181
            LN++TIK  +          EL  AK FSK+DLRAGYHQIRL   +  KT F T SG YE
Sbjct: 134  LNAITIKGKYPLPVIDELLDELSGAKYFSKLDLRAGYHQIRLQPGEEHKTAFQTHSGHYE 193

Query: 182  FKVMPFGLTNAPTTFQALMNHISKPHLRHFVLVFFDDILIYISSMIDHYHHLQIVFDILL 361
            ++VM FGLT AP TFQ  MN      LR F LVFFDDILIY   +  H  HL+ V  +L 
Sbjct: 194  YRVMSFGLTGAPATFQKAMNDTLATVLRKFTLVFFDDILIYSPDLPSHIQHLEQVLQLLQ 253

Query: 362  KNQPFAKASKCAFGQHQIDYLGYIISDKGIATDPAKIQAMVDWPQPQSVKALRGFLGLTG 541
              Q   K SKC+F Q Q+ YLG+II   G+ TDP+KI  ++ W  PQSVK LRGFLGL G
Sbjct: 254  AQQWKVKLSKCSFAQQQLAYLGHIIGKDGVTTDPSKIADVLHWKIPQSVKQLRGFLGLAG 313

Query: 542  YYRKFVLHYGLIAKPLTDLTKKG-QFKWHEGATTTFNTLKNAMTSAPVLQLQDFNKTFVV 718
            YYRKFV ++G I KPLT L KKG  FKW       FN LK A+ SAPVL L DF+KTF V
Sbjct: 314  YYRKFVRNFGTINKPLTQLLKKGVPFKWTAQMDEAFNALKQALVSAPVLALPDFSKTFTV 373

Query: 719  ESDACYSGLGAVLMQDNHPLAYFSKPLGLKNLGLSIYEKEFLAILLAIEKWRPYLIQGQF 898
            E+DAC  G+GAVL QD HP+A+ SK LG K  GLS YEKE+LAILLA+++WR YL   +F
Sbjct: 374  ETDACDMGIGAVLSQDRHPIAFVSKALGPKTRGLSTYEKEYLAILLAVDQWRSYLQHDEF 433

Query: 899  IIKSDQHSLKYLLEQKVSTPLHHKYLTKLMGFDFRIEYKKGVDNRVADALSRMDVDEGSC 1078
            +I +D H+L ++ +Q++ TPL HK  TKLMG  +++ Y++G  N  ADALSR D +    
Sbjct: 434  VILTDHHNLMHITDQRLHTPLQHKAFTKLMGLQYKVCYRRGTSNAAADALSRRDEETNDQ 493

Query: 1079 L-NITVLQPVWMEELQSSYENDAVA*GAITESIAFPFNLSLISYRNGLLRYKGQLYVGQG 1255
            L  ++  QP+W+  +   YE D  A   +TE    P          G+LRYKG++++G  
Sbjct: 494  LWAVSECQPLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQGVLRYKGKIWIGHN 553

Query: 1256 TELRRRIIKYMLSSSMGGHSGENATVQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENR 1435
              L+++++  + +S +GGHSG   T QRV   F WP ++ ++   V  C  CQ  K +  
Sbjct: 554  LSLQQQLVTALHASPIGGHSGFPVTYQRVKALFAWPQMKKMIQQWVKNCTICQQAKPDLA 613

Query: 1436 XXXXXXXXXXXXXXAWLHLTMDFIEQLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASH 1615
                          AW  +++DFIE LP S   N I VVVD+F++YAHF  L HP++A  
Sbjct: 614  KYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFSRYAHFVPLSHPFSALD 673

Query: 1616 LAHTFLDTDYKLHGLPSSIVSDRDKIFTSHFWQQLFKLLGVQQHLSTAYHPQTDGQTERV 1795
            +A +++   YKLHG+P  ++SDRDKIFTS  W+ LF   G+  HLS+AYHPQ+DGQT+RV
Sbjct: 674  VAVSYMKNIYKLHGMPKVLISDRDKIFTSKLWEFLFLKSGIALHLSSAYHPQSDGQTKRV 733

Query: 1796 NQCLESYLRCMCNTTPKHWSSWLAMAEFWYNTNFHTAIAMTPFEALYGYKANHLAFGPYL 1975
            NQCLE +LRC  N  P  W +WL +A +WYNT FH+A+  TPFE LYG+  N L  G  +
Sbjct: 734  NQCLEMFLRCFTNAAPFKWVTWLHLAGYWYNTCFHSALNKTPFEVLYGH--NPLQLGVTM 791

Query: 1976 QATVV-GVESLLQERQHIQHYLKTHLQQAQSKMKRATDRHCSDRHFNVGDWVCLKLKPYR 2152
            +   +  +   L ER+ +   L+ HL + Q KMK   D++ S R F VGDWV LKL+PY 
Sbjct: 792  ETCAIPDLAVWLHERKLMAELLQQHLHRVQQKMKFHADKNRSFREFAVGDWVFLKLQPYV 851

Query: 2153 QXXXXXXXXXXXXXXFAGPFQVLEKVGSVAYKLQLPPQAKIHPVFHVSILKKKVGSTDSI 2332
            Q              F GPFQ+L +VG+VAYKLQLP  + IHPVFHVS LK   G    +
Sbjct: 852  QKSVASRACHKLAFKFYGPFQILARVGTVAYKLQLPDDSTIHPVFHVSQLKVAHGFKHQV 911

Query: 2333 SPHLPPFDDDGKVILHPLNILARRLIKRHNVAVPQVLIRWAHLLDSEATWEDFHDITRQF 2512
               LP F    K  ++PL IL +RLI++ N  V QVL+ W+  +  +ATWED  D+ ++F
Sbjct: 912  QSRLPKF---LKSTVYPLQILDQRLIRKGNRTVSQVLVYWSDSVAEDATWEDREDLQQRF 968

Query: 2513 PHLQP*GQGRSLG 2551
            P     GQ    G
Sbjct: 969  PMALAWGQATFQG 981