BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00003436
         (1151 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   315   3e-83
emb|CBI33876.3| unnamed protein product [Vitis vinifera]              304   5e-80
ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   293   1e-76
ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   285   2e-74
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   283   9e-74
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   282   2e-73
gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma c...   277   5e-72
gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus pe...   276   1e-71
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   270   1e-69
ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citr...   268   2e-69
ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|5...   267   5e-69
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]      267   5e-69
gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]             259   1e-66
ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   257   5e-66
ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Caps...   251   3e-64
gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma c...   251   5e-64
ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arab...   251   5e-64
gb|AFK48727.1| unknown [Lotus japonicus]                              249   2e-63
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein...   247   6e-63
ref|XP_006410699.1| hypothetical protein EUTSA_v10016986mg [Eutr...   246   1e-62

>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  315 bits (806), Expect = 3e-83
 Identities = 167/273 (61%), Positives = 197/273 (72%), Gaps = 3/273 (1%)
 Frame = +3

Query: 33  LGAKEAISSIFPSYPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQ 212
           + A EA  SIF  Y S + K    ++   S+  H S   P++ LK+ LY LPLL      
Sbjct: 1   MAALEASLSIFSLYRSSSSKLLFSHRPPPSMSLHSSAFIPSICLKYPLYPLPLL---YTN 57

Query: 213 PTKKPGFQLLSAXXXXXXXXXXXKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVED 392
           PT K  F+L S+           ++++ + +RKLFVLNLPWS SV DIK +FGECG V D
Sbjct: 58  PTTKFSFELCSSVQEIEVEAKPEQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTD 117

Query: 393 VEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVT-- 566
           VEIIK KDG++RG+AFVTM SGEEAQA +EK+DSYEL GRIIRV+FAKRFKKP       
Sbjct: 118 VEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPP 177

Query: 567 -VNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFA 743
              PP GETR+KLYVSNLAWKVRS +LREFFSSNFNPVSVRVVFD+PSGRS GYGF SFA
Sbjct: 178 PAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFA 237

Query: 744 TKEEAESAISELDGKELLGRPIRLKFSEKNTDD 842
           TKEEAE+AIS LDGKEL+GRP+ LKFS K  D+
Sbjct: 238 TKEEAEAAISALDGKELMGRPVHLKFSVKTIDE 270


>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  304 bits (778), Expect = 5e-80
 Identities = 157/240 (65%), Positives = 182/240 (75%), Gaps = 3/240 (1%)
 Frame = +3

Query: 132 HISLSAPAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXXXXXKSEKQDNRRK 311
           H S   P++ LK+ LY LPLL      PT K  F+L S+           ++++ + +RK
Sbjct: 4   HSSAFIPSICLKYPLYPLPLL---YTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQKRK 60

Query: 312 LFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYD 491
           LFVLNLPWS SV DIK +FGECG V DVEIIK KDG++RG+AFVTM SGEEAQA +EK+D
Sbjct: 61  LFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFD 120

Query: 492 SYELVGRIIRVQFAKRFKKPIRTVT---VNPPPGETRYKLYVSNLAWKVRSNNLREFFSS 662
           SYEL GRIIRV+FAKRFKKP          PP GETR+KLYVSNLAWKVRS +LREFFSS
Sbjct: 121 SYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSS 180

Query: 663 NFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEKNTDD 842
           NFNPVSVRVVFD+PSGRS GYGF SFATKEEAE+AIS LDGKEL+GRP+ LKFS K  D+
Sbjct: 181 NFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVKTIDE 240


>ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
           lycopersicum]
          Length = 285

 Score =  293 bits (749), Expect = 1e-76
 Identities = 164/267 (61%), Positives = 195/267 (73%), Gaps = 3/267 (1%)
 Frame = +3

Query: 48  AISSIFPSYPSPTP--KFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTK 221
           A SSIF S PS +   KF  F  S+    ++ SL+   +SLK  LY LPL  PS+ Q T+
Sbjct: 7   AASSIFSSPPSSSSYLKFPLFPNSIKLQNYNHSLN---LSLKSILYPLPL--PSRKQCTQ 61

Query: 222 KPGFQLLSAXXXXXXXXXXXKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEI 401
                +              K +K + RRKLFVLNLPWS +VADIK +F ECG V+DVEI
Sbjct: 62  LHCSAVEVTEPVTVQEEKTEKPQKNNQRRKLFVLNLPWSLTVADIKNIFAECGIVDDVEI 121

Query: 402 IKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVN-PP 578
           IK KDGK+RGFAFVTM+SGEEAQAAI+K DSYE+ GRIIRV+FAKRFKKP      + PP
Sbjct: 122 IKTKDGKSRGFAFVTMSSGEEAQAAIDKLDSYEVSGRIIRVEFAKRFKKPPGAPPPSTPP 181

Query: 579 PGETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEA 758
            GE R+KLYVSNLAWKVRS  LREFFS+N NP+S RVVFDN SGR+AGYGFV+F TKE+A
Sbjct: 182 QGEARHKLYVSNLAWKVRSTQLREFFSANNNPISARVVFDNASGRAAGYGFVTFDTKEQA 241

Query: 759 ESAISELDGKELLGRPIRLKFSEKNTD 839
           E+A+S LDGKEL+GRPIRLKFSE++ D
Sbjct: 242 EAALSALDGKELMGRPIRLKFSERDAD 268


>ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
           tuberosum]
          Length = 284

 Score =  285 bits (729), Expect = 2e-74
 Identities = 156/265 (58%), Positives = 190/265 (71%), Gaps = 1/265 (0%)
 Frame = +3

Query: 48  AISSIFPSYPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKP 227
           A SSIF S P  +  +  F    +SI+   S  +  +SLK  L   PLLS  Q       
Sbjct: 7   AASSIFSSPPPSSSSYLKFPLFPNSIKLQNSNHSLNLSLKSIL---PLLSRKQCSQLHCS 63

Query: 228 GFQLLSAXXXXXXXXXXXKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIK 407
             ++ +            K +K + RRKLFVLNLPWS +V DIK +F ECG V+DVEIIK
Sbjct: 64  AVEV-TEPVTVQEEEKTEKPQKNNLRRKLFVLNLPWSLTVPDIKNIFAECGIVDDVEIIK 122

Query: 408 HKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPP-G 584
            +DGK+RGFAFVTM+SGEEAQAAI+K DSYE++GRIIRV+FAKRFKKP      + PP G
Sbjct: 123 TEDGKSRGFAFVTMSSGEEAQAAIDKLDSYEVLGRIIRVEFAKRFKKPPGAPPPSTPPQG 182

Query: 585 ETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAES 764
           E R+KLYVSNLAWKVRS  LREFFS+N+NP+S RV+FDN SGR+AGYGFVSF TKE+AE+
Sbjct: 183 EARHKLYVSNLAWKVRSTQLREFFSANYNPISARVIFDNASGRAAGYGFVSFDTKEQAEA 242

Query: 765 AISELDGKELLGRPIRLKFSEKNTD 839
           A+S LDGKEL+GRPIRLKFSE++ D
Sbjct: 243 AVSALDGKELMGRPIRLKFSERDAD 267


>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  283 bits (724), Expect = 9e-74
 Identities = 147/266 (55%), Positives = 191/266 (71%), Gaps = 2/266 (0%)
 Frame = +3

Query: 51  ISSIFPSYPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPG 230
           IS    S  S +     FNK  S I+  IS S+P +SL         +SP+    ++  G
Sbjct: 11  ISPYISSSSSSSASKLCFNKLPSPIKLRISFSSPLLSLN----PTTPISPTSFNSSRNRG 66

Query: 231 --FQLLSAXXXXXXXXXXXKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEII 404
              +L SA           +++  + +RKL++ NLPWS SV DIK++FG+CG V DVEII
Sbjct: 67  GGARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEII 126

Query: 405 KHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPG 584
           K K+G++RGFAFVTMAS +EAQAAI+K+DS E+ GR+I+V+FAKR KKP       PPPG
Sbjct: 127 KQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPG 186

Query: 585 ETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAES 764
           ET  KLYVSNLAWKVRSNNLR+FFS NFNP++ RVVFD+P+GRSAGYGFVSFAT+EEA++
Sbjct: 187 ETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQT 246

Query: 765 AISELDGKELLGRPIRLKFSEKNTDD 842
           A+S L+GKEL+GRP+RLKFSE+N ++
Sbjct: 247 ALSSLEGKELMGRPLRLKFSERNVNE 272


>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
           sativus]
          Length = 282

 Score =  282 bits (722), Expect = 2e-73
 Identities = 143/249 (57%), Positives = 186/249 (74%), Gaps = 2/249 (0%)
 Frame = +3

Query: 102 FNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPG--FQLLSAXXXXXXXXX 275
           FNK  S I+  IS S+P +SL         +SP+    ++  G   +L SA         
Sbjct: 22  FNKLPSPIKLRISFSSPLLSLN----PTTPISPTSFNSSRNRGGGARLCSALQEVTLEEA 77

Query: 276 XXKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMAS 455
             +++  + +RKL++ NLPWS SV DIK++FG+CG V DVEIIK K+G++RGFAFVTMAS
Sbjct: 78  SEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMAS 137

Query: 456 GEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRS 635
            +EAQAAI+K+DS E+ GR+I+V+FAKR KKP       PPPGET  KLYVSNLAWKVRS
Sbjct: 138 PDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRS 197

Query: 636 NNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRL 815
           NNLR+FFS NFNP++ RVVFD+P+GRSAGYGFVSFAT+EEA++A+S L+GKEL+GRP+RL
Sbjct: 198 NNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRL 257

Query: 816 KFSEKNTDD 842
           KFSE+N ++
Sbjct: 258 KFSERNVNE 266


>gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 281

 Score =  277 bits (709), Expect = 5e-72
 Identities = 154/273 (56%), Positives = 194/273 (71%), Gaps = 3/273 (1%)
 Frame = +3

Query: 33  LGAKEAISSI-FPSYPSPTPKFHSFNKS--LSSIRFHISLSAPAVSLKFALYNLPLLSPS 203
           + A EA++ + F   PS + K     K   LS +   IS SA  +S  F + +L      
Sbjct: 1   MAAVEAVAGLSFSRCPSSSSKSLLCPKPTRLSCLISGISKSASILSHSFFISSL------ 54

Query: 204 QAQPTKKPGFQLLSAXXXXXXXXXXXKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGG 383
                KKPGF L S            K++K + +RKLFVLNLPWS++VADIK +FG+CG 
Sbjct: 55  -TNSRKKPGFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYTVADIKDLFGQCGN 113

Query: 384 VEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTV 563
           V DVEIIK KDG++R FAFVTMASGEEAQAA++K DS+E+  RIIRV+FA+RFKKP  + 
Sbjct: 114 VTDVEIIKQKDGRSRNFAFVTMASGEEAQAAVDKLDSHEVSARIIRVEFARRFKKPSPSP 173

Query: 564 TVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFA 743
               PP ET +KLYVSNLAWKVRS++LREFFS+ FNPV+ RV+F  PSG+SAGYGFVSFA
Sbjct: 174 QPIVPPRETHHKLYVSNLAWKVRSSHLREFFSA-FNPVAARVIFGTPSGQSAGYGFVSFA 232

Query: 744 TKEEAESAISELDGKELLGRPIRLKFSEKNTDD 842
           TKEEA++AIS L+GKEL+ RP+RLKFSE+N D+
Sbjct: 233 TKEEADAAISTLNGKELMDRPLRLKFSERNVDE 265


>gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus persica]
          Length = 295

 Score =  276 bits (706), Expect = 1e-71
 Identities = 156/280 (55%), Positives = 191/280 (68%), Gaps = 7/280 (2%)
 Frame = +3

Query: 15  SATAMALGAKEAISSIFPSYPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLL 194
           +A   AL      SS F SY S   KF +  K  +S++ HIS S P +S  F   + P +
Sbjct: 2   AAFEAALSVSSLYSSSFSSYSS---KFFASPKPSTSLKLHISNSIPPISRNFLYSSPPCI 58

Query: 195 SPSQAQPTKKPGFQLLSAXXXXXXXXXXXKSEK------QDNRRKLFVLNLPWSFSVADI 356
             +   PT+KP F+L+ +             EK      Q+ +RKL+V+NLPWS +V DI
Sbjct: 59  LNN---PTRKPFFELMCSAVQEVTAEEEAVEEKAEETQTQNLKRKLYVVNLPWSLTVVDI 115

Query: 357 KKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAK 536
           K +FGECG V DVEIIK  +GK+RGFAFVTMASGEEAQA IEK+ S+E++ R IRV+FAK
Sbjct: 116 KNLFGECGTVTDVEIIKQPNGKSRGFAFVTMASGEEAQAVIEKFHSHEVLDRTIRVEFAK 175

Query: 537 RFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFN-PVSVRVVFDNPSGR 713
           +FKKP      NP   ETRYKLYVSNL WKVRS++LR+F S NF  PVS RVVF  PSG+
Sbjct: 176 QFKKP-SPPPPNPQIVETRYKLYVSNLGWKVRSSHLRDFVSENFKVPVSARVVFSGPSGK 234

Query: 714 SAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEKN 833
           S GYGF+SFATKEEAESAIS L+GKEL+GRP+ LKFSEKN
Sbjct: 235 SGGYGFLSFATKEEAESAISSLNGKELMGRPLNLKFSEKN 274


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532973|gb|EEF34739.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  270 bits (689), Expect = 1e-69
 Identities = 152/278 (54%), Positives = 194/278 (69%), Gaps = 8/278 (2%)
 Frame = +3

Query: 33  LGAKEAISSIFPSYPSPTPKFHSFNKSLSSIRFHISL--------SAPAVSLKFALYNLP 188
           + A EA  S+F  +PS      S +KSL S  F I+L        S P +S  F+L N+ 
Sbjct: 1   MAAMEAAVSLFLPHPS------SSSKSLLSPTF-INLFKHKCRSNSIPLLSHNFSLSNIH 53

Query: 189 LLSPSQAQPTKKPGFQLLSAXXXXXXXXXXXKSEKQDNRRKLFVLNLPWSFSVADIKKVF 368
           L +       +K  F+  S            ++++   +RKL+V NLPWS SV DIK +F
Sbjct: 54  LTA-------RKLSFERFSTAQEIMIPE---ETQETTQKRKLYVFNLPWSLSVVDIKNLF 103

Query: 369 GECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKK 548
           G+CG V DVEIIK K+G++RGFAFVT+ASGEEAQAAI+K DS+E+ GRIIRV+FAKR K 
Sbjct: 104 GQCGTVTDVEIIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKP 163

Query: 549 PIRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYG 728
           P           ETR+K+YVSNLAWKVRS +LREFFS+NF+PVS RVVFD+P+GRS+GYG
Sbjct: 164 PSPPSPTGTSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFDSPTGRSSGYG 223

Query: 729 FVSFATKEEAESAISELDGKELLGRPIRLKFSEKNTDD 842
           FVSFAT+EEAE+AIS LDGKEL+GRP+RLKFS++ TD+
Sbjct: 224 FVSFATREEAEAAISALDGKELMGRPLRLKFSDRKTDE 261


>ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citrus clementina]
           gi|567871683|ref|XP_006428431.1| hypothetical protein
           CICLE_v10012439mg [Citrus clementina]
           gi|567871685|ref|XP_006428432.1| hypothetical protein
           CICLE_v10012439mg [Citrus clementina]
           gi|568877400|ref|XP_006491727.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like isoform
           X1 [Citrus sinensis] gi|568877402|ref|XP_006491728.1|
           PREDICTED: ribonucleoprotein At2g37220,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|568877404|ref|XP_006491729.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like isoform
           X3 [Citrus sinensis] gi|557530487|gb|ESR41670.1|
           hypothetical protein CICLE_v10012439mg [Citrus
           clementina] gi|557530488|gb|ESR41671.1| hypothetical
           protein CICLE_v10012439mg [Citrus clementina]
           gi|557530489|gb|ESR41672.1| hypothetical protein
           CICLE_v10012439mg [Citrus clementina]
          Length = 275

 Score =  268 bits (686), Expect = 2e-69
 Identities = 144/264 (54%), Positives = 178/264 (67%)
 Frame = +3

Query: 48  AISSIFPSYPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKP 227
           + S +FP  P      HS N + S I                 YN P         T+  
Sbjct: 19  SFSCLFPKLPHCIKLLHSSNSTPSLI-----------------YNFP---------TRNV 52

Query: 228 GFQLLSAXXXXXXXXXXXKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIK 407
             Q+ S            +++KQ+ RRK++V NLPWSFSVA+IK +F  CG V DVEIIK
Sbjct: 53  CLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVDVEIIK 112

Query: 408 HKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGE 587
           HK GKNR FAFVTMAS EEAQAA+ ++D+ E+ GRIIRV+FAK+FKKP    + + P  E
Sbjct: 113 HKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSASAPARE 172

Query: 588 TRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESA 767
           T++KLYVSNL+WKVRS +LREFFS+NFNPVS +VVF++  GRSAGYGFVSFATKEEAE+A
Sbjct: 173 TQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAA 232

Query: 768 ISELDGKELLGRPIRLKFSEKNTD 839
           IS LDGKEL+GRP+RLKF +KN D
Sbjct: 233 ISSLDGKELMGRPLRLKFGQKNDD 256


>ref|XP_002326529.1| predicted protein [Populus trichocarpa]
           gi|566146773|ref|XP_006368391.1| 33 kDa
           ribonucleoprotein [Populus trichocarpa]
           gi|550346304|gb|ERP64960.1| 33 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 294

 Score =  267 bits (683), Expect = 5e-69
 Identities = 153/281 (54%), Positives = 190/281 (67%), Gaps = 9/281 (3%)
 Frame = +3

Query: 27  MALGAKEAISSIFPS--YPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSP 200
           MA    EA +  F S  +PS +  F S      S+  HIS   P +S     +N P  S 
Sbjct: 1   MAASILEAATLSFFSTHHPSYSRFFLSPKSPPLSLNLHISNPTPLIS-----HNFPQPSL 55

Query: 201 SQAQPTKKP-GFQLLSAXXXXXXXXXXXKSEKQDN--RRKLFVLNLPWSFSVADIKKVFG 371
           +Q  P  K   FQL S            + E Q+   +RKLFV+NLPWSFSV DIK +FG
Sbjct: 56  TQNHPRSKSLCFQLCSTVQEVTVEITPEEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFG 115

Query: 372 ECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKP 551
           +CG V DVEIIK K+G++RGFAFVTM +GEEAQAAI+K++S E+ GRIIRV+FAKR ++P
Sbjct: 116 QCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRP 175

Query: 552 ----IRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSA 719
               +     + P GETR+KLY+SNLAWKVR ++LREFFS+N NPVS RVVFD P+GRS+
Sbjct: 176 PSPRLPGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSS 235

Query: 720 GYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEKNTDD 842
           GYGFVSFAT+EEA +AIS   GKEL+GRPIRLKFSE   D+
Sbjct: 236 GYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSEDKADE 276


>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 294

 Score =  267 bits (683), Expect = 5e-69
 Identities = 153/281 (54%), Positives = 190/281 (67%), Gaps = 9/281 (3%)
 Frame = +3

Query: 27  MALGAKEAISSIFPS--YPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSP 200
           MA    EA +  F S  +PS +  F S      S+  HIS   P +S     +N P  S 
Sbjct: 1   MAASILEAATLSFFSTHHPSYSRFFLSPKSPPLSLNLHISNPTPLIS-----HNFPQPSL 55

Query: 201 SQAQPTKKP-GFQLLSAXXXXXXXXXXXKSEKQDN--RRKLFVLNLPWSFSVADIKKVFG 371
           +Q  P  K   FQL S            + E Q+   +RKLFV+NLPWSFSV DIK +FG
Sbjct: 56  TQNHPRSKSLCFQLCSTVQEVTMEITPEEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFG 115

Query: 372 ECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKP 551
           +CG V DVEIIK K+G++RGFAFVTM +GEEAQAAI+K++S E+ GRIIRV+FAKR ++P
Sbjct: 116 QCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRP 175

Query: 552 ----IRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSA 719
               +     + P GETR+KLY+SNLAWKVR ++LREFFS+N NPVS RVVFD P+GRS+
Sbjct: 176 PSPRLPGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSS 235

Query: 720 GYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEKNTDD 842
           GYGFVSFAT+EEA +AIS   GKEL+GRPIRLKFSE   D+
Sbjct: 236 GYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSEDKADE 276


>gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]
          Length = 295

 Score =  259 bits (662), Expect = 1e-66
 Identities = 125/186 (67%), Positives = 153/186 (82%), Gaps = 1/186 (0%)
 Frame = +3

Query: 288 EKQDN-RRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEE 464
           EK++N +RKL+V+NLPWS +V DIK +FG+CG V DVEIIK KDG+NRGFAFVTMA GEE
Sbjct: 87  EKENNQKRKLYVVNLPWSLTVVDIKSLFGQCGTVTDVEIIKQKDGRNRGFAFVTMACGEE 146

Query: 465 AQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRSNNL 644
           AQA I++++  ++ GRII+++ AK+FKKP       P PGET +KLYVSN+ WKVRS +L
Sbjct: 147 AQAVIDRFNLQDVSGRIIKIELAKQFKKPSPPRPPGPQPGETTHKLYVSNIEWKVRSTHL 206

Query: 645 REFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFS 824
           R+F S NF PVS RVVFD P GRSAGYGFVSFAT+EEAE+AIS LDGKEL+GRP+RLKFS
Sbjct: 207 RDFVSENFKPVSARVVFDGPKGRSAGYGFVSFATREEAEAAISSLDGKELMGRPLRLKFS 266

Query: 825 EKNTDD 842
           EKN  +
Sbjct: 267 EKNAGE 272


>ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 299

 Score =  257 bits (657), Expect = 5e-66
 Identities = 149/278 (53%), Positives = 185/278 (66%), Gaps = 11/278 (3%)
 Frame = +3

Query: 33  LGAKEAISSIFPSYPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQ 212
           + A EA  S+   Y   + K  SF K L+     +    P +S  F L + PL+      
Sbjct: 1   MAAFEAALSLPSLYSPCSSKTLSFPKPLN---LRLPSFIPPISHNFLLSSPPLI------ 51

Query: 213 PTKKPGFQLLSAXXXXXXXXXXX---------KSEKQDN-RRKLFVLNLPWSFSVADIKK 362
           P +K  F+LL +                    K++KQ N +RKL+V+NLPWS +VADIK 
Sbjct: 52  PARKLSFELLCSAVQEITTQEEEQAEQESAEEKTQKQQNLKRKLYVVNLPWSLTVADIKT 111

Query: 363 VFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRF 542
           +FG+CG V+DVEIIK  DG+NRGFAFVTMASGEEAQA I+K+DS EL GR ++V+FAK+F
Sbjct: 112 LFGQCGHVKDVEIIKQMDGRNRGFAFVTMASGEEAQAVIDKFDSQELSGRTVKVEFAKQF 171

Query: 543 KKPIRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNF-NPVSVRVVFDNPSGRSA 719
           KKP    +  P   ETRYKLYVSNLAWK RS++LR+F S NF  PVS RVVFD PSG+S 
Sbjct: 172 KKPTPRPS-TPKVQETRYKLYVSNLAWKARSSHLRDFVSLNFKTPVSARVVFDGPSGKSV 230

Query: 720 GYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEKN 833
           GYGFVSFA  EEAE AIS L+G+EL+GRP+ LKFSEKN
Sbjct: 231 GYGFVSFARMEEAEEAISALNGQELMGRPVTLKFSEKN 268


>ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Capsella rubella]
           gi|482563334|gb|EOA27524.1| hypothetical protein
           CARUB_v10023663mg [Capsella rubella]
          Length = 318

 Score =  251 bits (642), Expect = 3e-64
 Identities = 124/185 (67%), Positives = 155/185 (83%), Gaps = 4/185 (2%)
 Frame = +3

Query: 282 KSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGE 461
           +++K + +RKLFV NLPWS SV DI  +F +CG V +VEII+ KDGKNRGFAFVTMASGE
Sbjct: 86  ETQKSNLKRKLFVFNLPWSMSVHDISDLFRQCGTVNNVEIIRQKDGKNRGFAFVTMASGE 145

Query: 462 EAQAAIEKYDSYELVGRIIRVQFAKRFKKPI---RTVTVNPPPGETRYKLYVSNLAWKVR 632
           EAQAA++K+D++E+ GRIIRV FA+RFKKP         +PPPG+TR+KLYVSNLAWK R
Sbjct: 146 EAQAAVDKFDAFEVSGRIIRVNFARRFKKPTPKPPNALPSPPPGDTRHKLYVSNLAWKAR 205

Query: 633 SNNLREFF-SSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPI 809
           S +LRE F +++FNPVS RVVF +P GRS+GYGFVSFAT+EEAE+AI++LDGKE++GRPI
Sbjct: 206 STHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLDGKEIMGRPI 265

Query: 810 RLKFS 824
            LKFS
Sbjct: 266 ILKFS 270


>gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma cacao]
          Length = 248

 Score =  251 bits (640), Expect = 5e-64
 Identities = 142/255 (55%), Positives = 178/255 (69%), Gaps = 3/255 (1%)
 Frame = +3

Query: 33  LGAKEAISSI-FPSYPSPTPKFHSFNKS--LSSIRFHISLSAPAVSLKFALYNLPLLSPS 203
           + A EA++ + F   PS + K     K   LS +   IS SA  +S  F + +L      
Sbjct: 1   MAAVEAVAGLSFSRCPSSSSKSLLCPKPTRLSCLISGISKSASILSHSFFISSL------ 54

Query: 204 QAQPTKKPGFQLLSAXXXXXXXXXXXKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGG 383
                KKPGF L S            K++K + +RKLFVLNLPWS++VADIK +FG+CG 
Sbjct: 55  -TNSRKKPGFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYTVADIKDLFGQCGN 113

Query: 384 VEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTV 563
           V DVEIIK KDG++R FAFVTMASGEEAQAA++K DS+E+  RIIRV+FA+RFKKP  + 
Sbjct: 114 VTDVEIIKQKDGRSRNFAFVTMASGEEAQAAVDKLDSHEVSARIIRVEFARRFKKPSPSP 173

Query: 564 TVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFA 743
               PP ET +KLYVSNLAWKVRS++LREFFS+ FNPV+ RV+F  PSG+SAGYGFVSFA
Sbjct: 174 QPIVPPRETHHKLYVSNLAWKVRSSHLREFFSA-FNPVAARVIFGTPSGQSAGYGFVSFA 232

Query: 744 TKEEAESAISELDGK 788
           TKEEA++AIS L+GK
Sbjct: 233 TKEEADAAISTLNGK 247


>ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
           lyrata] gi|297325388|gb|EFH55808.1| hypothetical protein
           ARALYDRAFT_482506 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  251 bits (640), Expect = 5e-64
 Identities = 125/191 (65%), Positives = 157/191 (82%), Gaps = 4/191 (2%)
 Frame = +3

Query: 282 KSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGE 461
           +++K + +RKLFV NLPWS SV DI ++FG+CG V +VEII+ KDGKNRGFAFVTMASGE
Sbjct: 87  ETQKSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGE 146

Query: 462 EAQAAIEKYDSYELVGRIIRVQFAKRFKKPI---RTVTVNPPPGETRYKLYVSNLAWKVR 632
           EAQAAI+K+D+ ++ GRII V FA+RFKKP         +PPPG+TR+KLYVSNLAWK R
Sbjct: 147 EAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPPNDLPSPPPGDTRHKLYVSNLAWKAR 206

Query: 633 SNNLREFF-SSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPI 809
           S +LRE F +S+FNPVS RVVF +P GRS+GYGFVSFAT+EEAE AI++LDGKE++GRPI
Sbjct: 207 STHLRELFTASDFNPVSARVVFADPEGRSSGYGFVSFATREEAEDAIAKLDGKEIMGRPI 266

Query: 810 RLKFSEKNTDD 842
            LKFS ++  +
Sbjct: 267 ILKFSLRSASE 277


>gb|AFK48727.1| unknown [Lotus japonicus]
          Length = 285

 Score =  249 bits (635), Expect = 2e-63
 Identities = 137/279 (49%), Positives = 184/279 (65%), Gaps = 5/279 (1%)
 Frame = +3

Query: 21  TAMALGAKEAISSIFPSYPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSP 200
           +++++ A +  S+I   +P+  P+F         ++ H SLS          +NL L S 
Sbjct: 6   SSLSVFAPQRFSTIH-LFPAKPPEF---------VKLHASLSHS--------HNL-LFSS 46

Query: 201 SQAQPTKKPGFQLLSAXXXXXXXXXXXKSEKQDN----RRKLFVLNLPWSFSVADIKKVF 368
           + +  T KP  QL SA           + E+       ++KL+V NLPWS S ADIK +F
Sbjct: 47  NASSKTPKPCTQLCSALQEVAEAATEEEPEQDQQATYIKKKLYVFNLPWSMSAADIKDLF 106

Query: 369 GECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKK 548
           G+CG V DVEII+ KDG+ +G+AFVTMASGEEAQAA++K+D+ EL GRI+RV+ AKRFKK
Sbjct: 107 GQCGTVTDVEIIRGKDGRGKGYAFVTMASGEEAQAAVDKFDTLELSGRILRVELAKRFKK 166

Query: 549 PIRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFN-PVSVRVVFDNPSGRSAGY 725
           P      +PPP E R+ +Y SNLAWKVRS +LREFF+ NF  P+S R+VFD PSG++ GY
Sbjct: 167 PSPPGPPSPPPSEARHVIYASNLAWKVRSTHLREFFTENFKAPLSARIVFDTPSGKTTGY 226

Query: 726 GFVSFATKEEAESAISELDGKELLGRPIRLKFSEKNTDD 842
           GF+S+ TKEEAE+AIS LDGKEL+GR + LK SEK   +
Sbjct: 227 GFISYLTKEEAEAAISALDGKELMGRSLFLKISEKKVKE 265


>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
           thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
           RNA binding protein precursor [Arabidopsis thaliana]
           gi|14596023|gb|AAK68739.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|23198314|gb|AAN15684.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
           motifs) family protein [Arabidopsis thaliana]
          Length = 308

 Score =  247 bits (631), Expect = 6e-63
 Identities = 141/279 (50%), Positives = 187/279 (67%), Gaps = 13/279 (4%)
 Frame = +3

Query: 45  EAISSIFP-SYPSPTPKFHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTK 221
           EA  SIF  S  S + K + F+K  SS++        A+SL+      P+ S        
Sbjct: 5   EASLSIFSFSSSSSSSKPYLFSKRSSSLKL------TALSLRIPSNLSPVFSLRSGSDNS 58

Query: 222 KPGFQLL--------SAXXXXXXXXXXXKSEKQDNRRKLFVLNLPWSFSVADIKKVFGEC 377
           +    +L        SA           +++  + +RKLFV NLPWS SV DI ++FG+C
Sbjct: 59  RRLVSVLCSVAEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQC 118

Query: 378 GGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPI- 554
           G V +VEII+ KDGKNRGFAFVTMASGEEAQAAI+K+D++++ GRII V FA+RFKKP  
Sbjct: 119 GTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTP 178

Query: 555 --RTVTVNPPPGETRYKLYVSNLAWKVRSNNLREFF-SSNFNPVSVRVVFDNPSGRSAGY 725
                  +P PG+TR+KLYVSNLAWK RS +LRE F +++FNPVS RVVF +P GRS+GY
Sbjct: 179 KSPNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGY 238

Query: 726 GFVSFATKEEAESAISELDGKELLGRPIRLKFSEKNTDD 842
           GFVSFAT+EEAE+AI++L+GKE++GRPI LKFS ++  +
Sbjct: 239 GFVSFATREEAENAITKLNGKEIMGRPITLKFSLRSASE 277


>ref|XP_006410699.1| hypothetical protein EUTSA_v10016986mg [Eutrema salsugineum]
           gi|557111868|gb|ESQ52152.1| hypothetical protein
           EUTSA_v10016986mg [Eutrema salsugineum]
          Length = 306

 Score =  246 bits (629), Expect = 1e-62
 Identities = 126/195 (64%), Positives = 158/195 (81%), Gaps = 8/195 (4%)
 Frame = +3

Query: 282 KSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGE 461
           +++K + +RKLFV NLPWS SV DI ++FG+CG V +VEIIK KDGKNRGFAFVTMASGE
Sbjct: 81  ETQKSNQKRKLFVFNLPWSMSVNDISELFGQCGMVYNVEIIKQKDGKNRGFAFVTMASGE 140

Query: 462 EAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPP-------PGETRYKLYVSNLA 620
           +AQAAI+K D++++ GRIIRV FAKRFKKP    T  PP       PGETR+KLYVSNLA
Sbjct: 141 DAQAAIDKLDTFQVSGRIIRVNFAKRFKKP----TPKPPNALPYASPGETRHKLYVSNLA 196

Query: 621 WKVRSNNLREFF-SSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELL 797
           WK RS +LREFF +++FN VS RVVF +P GR++GYGFVSF T+EEAE+AI++L+GKEL+
Sbjct: 197 WKARSTHLREFFTAADFNLVSARVVFADPQGRASGYGFVSFPTREEAEAAIAKLNGKELM 256

Query: 798 GRPIRLKFSEKNTDD 842
           GRPI LKFS ++  +
Sbjct: 257 GRPISLKFSLRSAGE 271