BLASTX nr result

ID: Rehmannia26_contig00003065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00003065
         (421 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146297.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    45   4e-07
ref|NP_001234448.1| CONSTANS-like protein [Solanum lycopersicum]...    43   3e-06

>ref|XP_004146297.1| PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Cucumis
           sativus] gi|449520710|ref|XP_004167376.1| PREDICTED:
           zinc finger protein CONSTANS-LIKE 5-like [Cucumis
           sativus]
          Length = 368

 Score = 45.4 bits (106), Expect(2) = 4e-07
 Identities = 24/66 (36%), Positives = 34/66 (51%)
 Frame = -3

Query: 257 FLDFY*PNQISGGHXXXXXXXSQPYSDGLVPVQTTIKPPVQAQLTHQHSPENRFEIDFTR 78
           F+DF  PN ++  H            D +VPVQT  KP     + H HSPEN ++I+F R
Sbjct: 178 FIDFEYPNSVNDDH--------NDIKDSIVPVQT--KPDPTPVINHTHSPENCYDIEFCR 227

Query: 77  SNITCY 60
           S +  +
Sbjct: 228 SKLNSF 233



 Score = 33.9 bits (76), Expect(2) = 4e-07
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -1

Query: 421 PLARRHERAPVIPFYDTTAAAELMVPVSSSAHNVFDEMSERKLETCTAQNGYIP---DSW 251
           PLA RHER PV PF+DT   AE +V  SS    V + +   +   C   + +      SW
Sbjct: 92  PLASRHERVPVEPFFDT---AESVVKSSS----VLNFLVPDETNVCDGVHHHEEVEVASW 144

Query: 250 ISTNPT 233
           + +NP+
Sbjct: 145 LLSNPS 150


>ref|NP_001234448.1| CONSTANS-like protein [Solanum lycopersicum]
           gi|186915025|gb|ACC95379.1| CONSTANS-like protein
           [Solanum lycopersicum] gi|365222864|gb|AEW69784.1|
           Hop-interacting protein THI010 [Solanum lycopersicum]
          Length = 386

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
 Frame = -1

Query: 421 PLARRHERAPVIPFYD------TTAAAELMVPV------SSSAHNVFDEMSERKLETCTA 278
           PLARRHER PV+PFYD       + AA L+V +      +++   +  E+   K++TC  
Sbjct: 96  PLARRHERVPVVPFYDPVESVVKSTAATLLVSINGTTTTATTTATITPELG--KVDTCIG 153

Query: 277 QNGYIPDSWISTN 239
            +    D WI  N
Sbjct: 154 HHENNNDPWIPPN 166



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = -3

Query: 194 SQPY----SDGLVPVQTTIKPPVQAQLTHQHSPENRFEIDFTRSNITCYN 57
           SQP+    +D +VPVQ     P+++   H    E  FEIDFT+S+I  YN
Sbjct: 204 SQPHYNSSNDSVVPVQANT--PIKSLPFHHQ--EKHFEIDFTQSHIKSYN 249


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