BLASTX nr result

ID: Rehmannia26_contig00002890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00002890
         (486 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36576.1| ARF domain class transcription factor [Malus dome...    67   2e-09

>gb|ADL36576.1| ARF domain class transcription factor [Malus domestica]
          Length = 895

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 52/178 (29%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
 Frame = -3

Query: 481 SIMQFQQPQFV--NSRPPGLVHPQILQQCQSSSPFLQNLQS---QTQPQTHAXXXXXXXX 317
           S++QFQQPQ +  ++R   L+ PQ++Q+  S   FLQ +Q    Q+QPQ           
Sbjct: 463 SLLQFQQPQSLPNSNRSAALMQPQMVQESHSQQAFLQGVQENHRQSQPQAQTQSHLLQQQ 522

Query: 316 XXXXXXNVXXXXXXXXXXQSTPMQHVIDXXXXXXXXXXXXXXXXXXXXXXXXXXSFSESN 137
                             Q  P    +                           SFS+SN
Sbjct: 523 LQHQNSFSNQQQQQLVDHQHIPS--AVSSLTQFASASQSQSPSLQVVTTLCHQQSFSDSN 580

Query: 136 VKPVVGNISSPLHSLLGSTHQDE----------------EGWPTKRVALDPLLSGGIS 11
             P    + SPLH+L+GS  QDE                +GWP+KR A+DPLLS G+S
Sbjct: 581 GNPATSTVISPLHNLMGSFPQDESSHLLNLPRTNQLISSDGWPSKRAAIDPLLSSGVS 638


Top