BLASTX nr result

ID: Rehmannia26_contig00001932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00001932
         (399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61666.1| hypothetical protein OsJ_16127 [Oryza sativa Japo...    42   1e-06
ref|NP_001053842.2| Os04g0612000 [Oryza sativa Japonica Group] g...    42   1e-06
gb|EEC77980.1| hypothetical protein OsI_17357 [Oryza sativa Indi...    41   3e-06

>gb|EEE61666.1| hypothetical protein OsJ_16127 [Oryza sativa Japonica Group]
          Length = 740

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 22/39 (56%), Positives = 24/39 (61%)
 Frame = +3

Query: 120 WKSCKIAHCFYPHEGGDEFSSPWDIARDLNAVIWEPLEL 236
           W  CK+ H FY   GGD FSSP   A  L+AVI EPL L
Sbjct: 700 WSMCKVCHFFY--SGGDGFSSPTAKAGALDAVIHEPLNL 736



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 18/40 (45%), Positives = 28/40 (70%)
 Frame = +1

Query: 1   SEEEAILKVQQIVEYHRTKVLEMVYQRKGSIVPRECNELF 120
           S EEA+ ++Q+ +E  R ++L++V  R G+ VPR C ELF
Sbjct: 661 SMEEAVKQIQRPIEKCRRELLKLVVSRGGA-VPRPCRELF 699


>ref|NP_001053842.2| Os04g0612000 [Oryza sativa Japonica Group]
           gi|255675769|dbj|BAF15756.2| Os04g0612000 [Oryza sativa
           Japonica Group]
          Length = 715

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 22/39 (56%), Positives = 24/39 (61%)
 Frame = +3

Query: 120 WKSCKIAHCFYPHEGGDEFSSPWDIARDLNAVIWEPLEL 236
           W  CK+ H FY   GGD FSSP   A  L+AVI EPL L
Sbjct: 675 WSMCKVCHFFY--SGGDGFSSPTAKAGALDAVIHEPLNL 711



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 18/40 (45%), Positives = 28/40 (70%)
 Frame = +1

Query: 1   SEEEAILKVQQIVEYHRTKVLEMVYQRKGSIVPRECNELF 120
           S EEA+ ++Q+ +E  R ++L++V  R G+ VPR C ELF
Sbjct: 636 SMEEAVKQIQRPIEKCRRELLKLVVSRGGA-VPRPCRELF 674


>gb|EEC77980.1| hypothetical protein OsI_17357 [Oryza sativa Indica Group]
          Length = 740

 Score = 41.2 bits (95), Expect(2) = 3e-06
 Identities = 21/39 (53%), Positives = 24/39 (61%)
 Frame = +3

Query: 120 WKSCKIAHCFYPHEGGDEFSSPWDIARDLNAVIWEPLEL 236
           W  CK+ H FY   GGD FSSP   A  ++AVI EPL L
Sbjct: 700 WSMCKVCHFFY--SGGDGFSSPTAKAGAVDAVIHEPLNL 736



 Score = 35.4 bits (80), Expect(2) = 3e-06
 Identities = 18/40 (45%), Positives = 28/40 (70%)
 Frame = +1

Query: 1   SEEEAILKVQQIVEYHRTKVLEMVYQRKGSIVPRECNELF 120
           S EEA+ ++Q+ +E  R ++L++V  R G+ VPR C ELF
Sbjct: 661 SMEEAVKQIQRPIEKCRRELLKLVVSRGGA-VPRPCRELF 699


Top