BLASTX nr result
ID: Rehmannia26_contig00001708
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00001708
(564 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protei... 92 9e-17
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1... 77 3e-12
ref|XP_002314076.1| photosystem II 5 kD family protein [Populus ... 73 6e-11
ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago trunc... 70 3e-10
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc... 69 6e-10
sp|B3EWI4.1|PST2_PETHY RecName: Full=Photosystem II 5 kDa protei... 69 1e-09
ref|XP_004499891.1| PREDICTED: photosystem II 5 kDa protein, chl... 66 7e-09
ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl... 66 7e-09
gb|EOY32695.1| Photosystem II 5 kD protein, putative [Theobroma ... 65 9e-09
ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycin... 65 9e-09
ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chl... 65 2e-08
gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theo... 64 3e-08
ref|NP_001237828.1| uncharacterized protein LOC100306374 [Glycin... 64 3e-08
ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin... 64 3e-08
gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus pe... 63 4e-08
gb|EXB93319.1| hypothetical protein L484_015307 [Morus notabilis] 62 8e-08
sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protei... 62 8e-08
ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast pr... 62 8e-08
gb|ABD91572.1| unknown [Brassica rapa] 62 1e-07
ref|NP_566674.1| photosystem II subunit T [Arabidopsis thaliana]... 62 1e-07
>gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protein [Picrorhiza
kurrooa]
Length = 102
Score = 92.0 bits (227), Expect = 9e-17
Identities = 49/86 (56%), Positives = 55/86 (63%)
Frame = +1
Query: 184 KQNLTTAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXIEP 363
KQ TT GV +VRASK+S+ + N KEE NNTRRDLMF EP
Sbjct: 18 KQLPTTGRGGVAMVRASKESEKLTV-NVKEESNNTRRDLMFAMAAVVASSIANFAMADEP 76
Query: 364 QRGTAEAKKKYAPVCVTNPTARICRY 441
+RGT EAKKKYA VCVTNPTARIC+Y
Sbjct: 77 KRGTVEAKKKYAAVCVTNPTARICKY 102
>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
unknown [Populus trichocarpa]
gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
[Populus trichocarpa x Populus deltoides]
gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
[Populus trichocarpa x Populus deltoides]
Length = 105
Score = 77.0 bits (188), Expect = 3e-12
Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 184 KQNLTTAHRGVVVVRASKDSDNM-VAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXIE 360
KQ LTT RG++V +AS+ ++ + V KEE ++ RRDLMF E
Sbjct: 18 KQPLTTPRRGLIVAKASRTTEGVNVEMKNKEESSSGRRDLMFAAAAAAAYSIARVAIADE 77
Query: 361 -PQRGTAEAKKKYAPVCVTNPTARICR 438
P+RGT EAKKKYAP+CVT PTARICR
Sbjct: 78 EPERGTPEAKKKYAPICVTMPTARICR 104
>ref|XP_002314076.1| photosystem II 5 kD family protein [Populus trichocarpa]
gi|222850484|gb|EEE88031.1| photosystem II 5 kD family
protein [Populus trichocarpa]
Length = 105
Score = 72.8 bits (177), Expect = 6e-11
Identities = 47/108 (43%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Frame = +1
Query: 121 MASITMXXXXXXXXXXXXXXXKQNLTTAHRGVVVVRASKDSDNM-VAPNTKEEGNNTRRD 297
MASITM KQ TT RG++V +AS+ ++ + V +EE + RRD
Sbjct: 1 MASITMTASFLTGSAMA----KQPSTTPRRGLIVAKASRATEGVNVEMKNREESSGGRRD 56
Query: 298 LMFXXXXXXXXXXXXXXXXIE-PQRGTAEAKKKYAPVCVTNPTARICR 438
LMF E P+RGT EAKKKYAP+CVT PTARICR
Sbjct: 57 LMFAAAAAAAYSIARVAIADEEPRRGTPEAKKKYAPICVTMPTARICR 104
>ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488306|gb|AES69509.1| Photosystem II 5 kDa protein
[Medicago truncatula] gi|388501032|gb|AFK38582.1|
unknown [Medicago truncatula]
Length = 105
Score = 70.5 bits (171), Expect = 3e-10
Identities = 45/108 (41%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 121 MASITMXXXXXXXXXXXXXXXKQNLTTAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDL 300
MASITM + ++ T R VV + + + V + +EG+N RRDL
Sbjct: 1 MASITMTSSMVGFPAVTN---RSSVATQRRFVVSAVRAVEGEKTVKYDDDKEGSNGRRDL 57
Query: 301 MFXXXXXXXXXXXXXXXXI-EPQRGTAEAKKKYAPVCVTNPTARICRY 441
MF EP+RGT EAKKKY PVCVTNPTARICRY
Sbjct: 58 MFAAAAAAVCSVAGVAMADDEPRRGTPEAKKKYGPVCVTNPTARICRY 105
>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
[Medicago truncatula]
Length = 106
Score = 69.3 bits (168), Expect = 6e-10
Identities = 46/109 (42%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = +1
Query: 121 MASITMXXXXXXXXXXXXXXXKQNLTTAHRGVVVVRASK--DSDNMVAPNTKEEGNNTRR 294
MASITM Q+ + R +VVV A + + + M+ + +EG+N RR
Sbjct: 1 MASITMTSSILGFPAVT----NQSSVASQRRLVVVNAVRAVEGEKMIRYDNSKEGSNGRR 56
Query: 295 DLMFXXXXXXXXXXXXXXXXIE-PQRGTAEAKKKYAPVCVTNPTARICR 438
DLMF E P+RGT EAKKKYAPVCVT PTARICR
Sbjct: 57 DLMFAAAAAAVSTFAGVAMADEEPKRGTPEAKKKYAPVCVTMPTARICR 105
>sp|B3EWI4.1|PST2_PETHY RecName: Full=Photosystem II 5 kDa protein, chloroplastic; Flags:
Precursor
Length = 106
Score = 68.6 bits (166), Expect = 1e-09
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +1
Query: 208 RGVVVVRASKDSDNMVAPNTKEEGNNT-RRDLMFXXXXXXXXXXXXXXXXIE-PQRGTAE 381
RGVV+V+A + +N V + EE N+ RR+L F E P+RGT E
Sbjct: 27 RGVVMVKAMHEGENNVVISKNEESKNSGRRELFFAMAAAAACSVAKTAMADEEPKRGTPE 86
Query: 382 AKKKYAPVCVTNPTARICRY 441
AKKKY+ VCVTNPTARICRY
Sbjct: 87 AKKKYSSVCVTNPTARICRY 106
>ref|XP_004499891.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like [Cicer
arietinum]
Length = 105
Score = 65.9 bits (159), Expect = 7e-09
Identities = 38/79 (48%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 208 RGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXI-EPQRGTAEA 384
R VV + + N V+ + +EG+N RRDLMF EP+RGT EA
Sbjct: 27 RLVVSAVRAVEGKNSVSYDNDKEGSNGRRDLMFAAAAAAVCSVAGVAMADDEPKRGTPEA 86
Query: 385 KKKYAPVCVTNPTARICRY 441
KKKYA VCVTNPTA+ICRY
Sbjct: 87 KKKYAVVCVTNPTAKICRY 105
>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 104
Score = 65.9 bits (159), Expect = 7e-09
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +1
Query: 196 TTAHRGVVVVRASKDSD----NMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXIEP 363
+T R ++V +AS+ + + +KEE ++ RRDL+F EP
Sbjct: 19 STPRRSLIVAKASRAPEAEKVTVELKQSKEESSSGRRDLIFAAAAAAACSIAKVAMADEP 78
Query: 364 QRGTAEAKKKYAPVCVTNPTARICR 438
+RGT AKKKYAPVCVT PTARICR
Sbjct: 79 ERGTPAAKKKYAPVCVTMPTARICR 103
>gb|EOY32695.1| Photosystem II 5 kD protein, putative [Theobroma cacao]
Length = 122
Score = 65.5 bits (158), Expect = 9e-09
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +1
Query: 196 TTAHRGVVVVRASKDSDNMVAPNTKEEG-NNTRRDLMFXXXXXXXXXXXXXXXXIE-PQR 369
TTA RGV+V +AS+ ++ ++G NN RR+L+F E P+
Sbjct: 24 TTARRGVIVAKASEAAEGEKGSRELKQGSNNRRRELVFAAAAAAACSIANVAMGAEDPKA 83
Query: 370 GTAEAKKKYAPVCVTNPTARIC 435
GT EAKKKYAP+CVT PTAR+C
Sbjct: 84 GTPEAKKKYAPICVTMPTARVC 105
>ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycine max]
gi|255626973|gb|ACU13831.1| unknown [Glycine max]
Length = 101
Score = 65.5 bits (158), Expect = 9e-09
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +1
Query: 184 KQNLTTAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXIEP 363
K++ A R ++VV A+K V+ + + +N RR+LMF EP
Sbjct: 18 KRSAVAAQRRLLVVSAAKAEGEKVSYDNND--SNGRRNLMFAVAAAAVPSVAGMAVADEP 75
Query: 364 QRGTAEAKKKYAPVCVTNPTARICR 438
+ GT+EAKKKYAPVCVTNPTA ICR
Sbjct: 76 KPGTSEAKKKYAPVCVTNPTASICR 100
>ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 106
Score = 64.7 bits (156), Expect = 2e-08
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 184 KQNLTTAHRGVVVVRASKDSD----NMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXX 351
KQ +TA R ++V +AS + NM N K E RR+L+
Sbjct: 17 KQPSSTARRPLIVAKASTSNQASNVNMEVKNVKVESRQGRRELVAAAVTVAAATLAKAAM 76
Query: 352 XIEPQRGTAEAKKKYAPVCVTNPTARICR 438
EP RG+ EAK+KYAP+CVT PTARICR
Sbjct: 77 ADEPARGSPEAKQKYAPICVTMPTARICR 105
>gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theobroma cacao]
Length = 106
Score = 63.9 bits (154), Expect = 3e-08
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 202 AHRGVVVVRASKDSDN---MVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXIEPQRG 372
AHR +VV A+K ++ ++ TK E NN RR+LMF EP+ G
Sbjct: 24 AHRRLVVANAAKGAEVERVKLSGETKRECNNGRRELMFAAAAAAVCSVAGVAAADEPKPG 83
Query: 373 TAEAKKKYAPVCVTNPTARIC 435
T EA+K YAP+CVT PTARIC
Sbjct: 84 TPEARKVYAPICVTMPTARIC 104
>ref|NP_001237828.1| uncharacterized protein LOC100306374 [Glycine max]
gi|255628337|gb|ACU14513.1| unknown [Glycine max]
Length = 104
Score = 63.9 bits (154), Expect = 3e-08
Identities = 39/81 (48%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 199 TAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXI-EPQRGT 375
T R VVV ASK + + G+N RR+LMF EP+ GT
Sbjct: 24 TQRRSVVVNAASKSVEGEKV-SYDNNGSNARRNLMFATAAAAVCSFAAGMALADEPKPGT 82
Query: 376 AEAKKKYAPVCVTNPTARICR 438
+EAKKKYAPVCVTNPTARICR
Sbjct: 83 SEAKKKYAPVCVTNPTARICR 103
>ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
gi|255632908|gb|ACU16808.1| unknown [Glycine max]
Length = 104
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/82 (42%), Positives = 44/82 (53%)
Frame = +1
Query: 193 LTTAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXIEPQRG 372
+ T R +VV A V+ + +G+N RR+LMF EP+ G
Sbjct: 22 VATQRRSLVVNAAKAVEAEKVSYDNDMDGSNGRRNLMFAAAAAAVCSVAGMAVADEPKPG 81
Query: 373 TAEAKKKYAPVCVTNPTARICR 438
T EAKKKYAP+CVT PTARICR
Sbjct: 82 TPEAKKKYAPICVTMPTARICR 103
>gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus persica]
Length = 107
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +1
Query: 196 TTAHRGVVVVRASK----DSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXIEP 363
+TA R ++V +AS + ++ + ++ RRDLMF EP
Sbjct: 22 STARRSLIVAKASSAPEGEKGSLEMKKSSSSSSSGRRDLMFAAAAAAACSIAKAAMADEP 81
Query: 364 QRGTAEAKKKYAPVCVTNPTARICR 438
+RG+ EAK+KYAPVCVT PTARICR
Sbjct: 82 KRGSKEAKEKYAPVCVTMPTARICR 106
>gb|EXB93319.1| hypothetical protein L484_015307 [Morus notabilis]
Length = 109
Score = 62.4 bits (150), Expect = 8e-08
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +1
Query: 196 TTAHRGVVVVRASKDSD----NMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXIE- 360
T + RG++V +AS S+ N+ +KEE ++ RRDLM E
Sbjct: 23 TASRRGLIVAKASAGSEAEKVNLQMRKSKEENSSGRRDLMLAVAAAAACSVAKIAMADEE 82
Query: 361 PQRGTAEAKKKYAPVCVTNPTARICR 438
P+RGT AKKKYA VCVT PTARICR
Sbjct: 83 PKRGTEGAKKKYAVVCVTMPTARICR 108
>sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protein, chloroplastic;
Short=PSII-T; AltName: Full=Light-regulated unknown 11
kDa protein; Flags: Precursor gi|18512|emb|CAA38027.1|
hypothetical protein [Gossypium hirsutum]
Length = 105
Score = 62.4 bits (150), Expect = 8e-08
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +1
Query: 208 RGVVVVRASKDSDN---MVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXXIEPQRGTA 378
R +VV A+K + ++ K EGNN RR++MF EP+RG+A
Sbjct: 26 RRLVVANAAKGAQVESVQMSGERKTEGNNGRREMMFAAAAAAICSVAGVATA-EPKRGSA 84
Query: 379 EAKKKYAPVCVTNPTARICR 438
EAKK YAPVCVT PTARICR
Sbjct: 85 EAKKAYAPVCVTMPTARICR 104
>ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
[Ricinus communis] gi|223547402|gb|EEF48897.1|
Photosystem II 5 kDa protein, chloroplast precursor,
putative [Ricinus communis]
Length = 106
Score = 62.4 bits (150), Expect = 8e-08
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +1
Query: 184 KQNLTTAHRGVVVVRASKDSDNM---VAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXX 354
+Q T RG++V +ASK ++ V KEE ++ RRDL+F
Sbjct: 18 RQPFTAPRRGLIVAKASKVTEGERVNVEMKNKEESSSGRRDLVFAAAAAAAFSVAKVAMA 77
Query: 355 IEPQRGTAEAKKKYAPVCVTNPTARIC 435
EP+ GT +AKKKYA +CV+ PTA+IC
Sbjct: 78 DEPKAGTLDAKKKYASICVSMPTAKIC 104
>gb|ABD91572.1| unknown [Brassica rapa]
Length = 106
Score = 62.0 bits (149), Expect = 1e-07
Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Frame = +1
Query: 199 TAHRGVVVVRASK-DSDNMVAPNTKEEGNNT--RRDLMFXXXXXXXXXXXXXXXXIE--P 363
T+ R + VVRASK ++ + TKEE ++T RRDLMF E P
Sbjct: 21 TSGRRMSVVRASKSENTTSLEVKTKEEQSSTTMRRDLMFTAAAAAVCALAKAAMADEEEP 80
Query: 364 QRGTAEAKKKYAPVCVTNPTARICRY 441
+RGT AKKKYA VCVT PTA+ICRY
Sbjct: 81 KRGTEAAKKKYAQVCVTMPTAKICRY 106
>ref|NP_566674.1| photosystem II subunit T [Arabidopsis thaliana]
gi|21542450|sp|Q39195.2|PST2_ARATH RecName:
Full=Photosystem II 5 kDa protein, chloroplastic;
Short=PSII-T; AltName: Full=Nuclear encoded psbT;
AltName: Full=PsbTn; Flags: Precursor
gi|11692868|gb|AAG40037.1|AF324686_1 MSA6 [Arabidopsis
thaliana] gi|11908024|gb|AAG41441.1|AF326859_1 unknown
protein [Arabidopsis thaliana]
gi|12642844|gb|AAK00364.1|AF339682_1 unknown protein
[Arabidopsis thaliana] gi|11994265|dbj|BAB01448.1|
photosystem II 5 kD protein precursor [Arabidopsis
thaliana] gi|17065058|gb|AAL32683.1| photosystem II 5 kD
protein precursor [Arabidopsis thaliana]
gi|20260032|gb|AAM13363.1| photosystem II 5 kD protein
precursor [Arabidopsis thaliana]
gi|21593345|gb|AAM65294.1| photosystem II [Arabidopsis
thaliana] gi|332642933|gb|AEE76454.1| photosystem II
subunit T [Arabidopsis thaliana]
Length = 103
Score = 61.6 bits (148), Expect = 1e-07
Identities = 41/84 (48%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +1
Query: 199 TAHRGVVVVRASKDSDNMVAPNTKEEGNNT-RRDLMFXXXXXXXXXXXXXXXXIE--PQR 369
T R + VVRAS SDN + KE+ + T RRDLMF E P+R
Sbjct: 21 TGGRRLSVVRAST-SDNTPSLEVKEQSSTTMRRDLMFTAAAAAVCSLAKVAMAEEEEPKR 79
Query: 370 GTAEAKKKYAPVCVTNPTARICRY 441
GT AKKKYA VCVT PTA+ICRY
Sbjct: 80 GTEAAKKKYAQVCVTMPTAKICRY 103