BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00001635
         (1241 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259...   385   e-104
ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra...   376   e-101
ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II tra...   375   e-101
ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II tra...   375   e-101
gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus...   372   e-100
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra...   369   2e-99
ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II tra...   366   9e-99
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              365   2e-98
gb|EOY02123.1| Phytochrome and flowering time regulatory protein...   362   1e-97
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra...   359   1e-96
gb|EOY02124.1| Phytochrome and flowering time regulatory protein...   358   3e-96
ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II tra...   357   6e-96
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot...   357   6e-96
ref|XP_004513304.1| PREDICTED: mediator of RNA polymerase II tra...   353   8e-95
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   351   4e-94
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   351   4e-94
ref|XP_006415884.1| hypothetical protein EUTSA_v10006778mg [Eutr...   334   5e-89
dbj|BAJ34376.1| unnamed protein product [Thellungiella halophila]     331   4e-88
ref|XP_006306776.1| hypothetical protein CARUB_v10008315mg [Caps...   330   1e-87
ref|NP_001077596.1| mediator of RNA polymerase II transcription ...   328   3e-87

>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
          Length = 827

 Score =  385 bits (990), Expect = e-104
 Identities = 235/461 (50%), Positives = 276/461 (59%), Gaps = 64/461 (13%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++LSR G++++ +NQ+PVK+D+                 NG ++ R  I+VG +   TVK
Sbjct: 233  AALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVK 291

Query: 184  PEPTALASVT-GPAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVNN 360
             EP+ + S+T GP FPHI SVPRAASQ VPSLQTSSP STSQ+MI+N +N  D+KP V+ 
Sbjct: 292  VEPSTVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSG 351

Query: 361  VTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGTSIGLPSKTPI-----LSNMISSG 510
            ++ +LRPV  AAANV ILN+++QARQ     ALSGGTSIGL S         +SNMISSG
Sbjct: 352  ISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSG 411

Query: 511  MTTSVSAAQTXXXXXXXXXXXXXXX------------------------------LPMSQ 600
            M +SV A QT                                             L +SQ
Sbjct: 412  MASSVPATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQ 471

Query: 601  PITNLQGSVGLVQT------------QMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 744
            P++NLQG V + QT            QM Q+                             
Sbjct: 472  PLSNLQGGVSMGQTVPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPG 531

Query: 745  XXN-----------SNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITR 891
                          +N++ +NMP              KY+KVWEGNLSGQRQGQPVFITR
Sbjct: 532  MSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITR 591

Query: 892  LEGYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 1071
            LEGYRSASASE+LAANWP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE
Sbjct: 592  LEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 651

Query: 1072 KKLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            KKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 652  KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 692


>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Glycine max]
          Length = 877

 Score =  376 bits (965), Expect = e-101
 Identities = 239/460 (51%), Positives = 273/460 (59%), Gaps = 64/460 (13%)
 Frame = +1

Query: 7    SLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVKP 186
            +LSRSG+TSLPSNQ+PVKVD                  NGS+  RQP+  GN+ P TVK 
Sbjct: 233  ALSRSGITSLPSNQSPVKVDAVSVTPVTGAPPTSMPV-NGSIPNRQPVPAGNVAPATVKV 291

Query: 187  EPTALAS-VTGPAFPHISSVPRAAS--QAVPSLQTSSPMSTSQDMIANNENAPDMKPAVN 357
            EP  + S V+GPAFPH SSVPRA S  Q VPSLQTSSP S SQD+I NNE A D KP V+
Sbjct: 292  EPVPVTSMVSGPAFPHNSSVPRATSTSQGVPSLQTSSPSSVSQDIITNNETAQDTKPTVS 351

Query: 358  NVTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGTSIGLPS--KTPI---LSNMIS- 504
             +   LRPV    ANV ILN+++QARQ     ALSGGTS+GLPS  +TP+   +SNMIS 
Sbjct: 352  MLP--LRPVNPVQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISS 409

Query: 505  -----------------SGMTTSVSA------AQTXXXXXXXXXXXXXXXLP------MS 597
                             SG+T+  S+      AQ                L       +S
Sbjct: 410  GMTSSVPAAQNVFSSGQSGITSMTSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSSNIGIS 469

Query: 598  QPITNLQGSVGLVQ------------TQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 741
            QP+ NLQG V + Q             QM Q                             
Sbjct: 470  QPLGNLQGVVSIGQQVSGMSQGNLSGAQMVQGGVSMNQNVMSGLGQSVVSSGTGTMIPTP 529

Query: 742  XXXNS---------NHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRL 894
                          N++ +NMP              KY+KVWEG+LSGQRQGQPVFIT+L
Sbjct: 530  GMSQPVQSVMQPLVNNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKL 589

Query: 895  EGYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK 1074
            EGYR++SASETLAANWPP+MQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQEK
Sbjct: 590  EGYRNSSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEK 649

Query: 1075 KLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            KLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 650  KLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQL 689


>ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X3 [Glycine max]
          Length = 725

 Score =  375 bits (964), Expect = e-101
 Identities = 240/460 (52%), Positives = 275/460 (59%), Gaps = 64/460 (13%)
 Frame = +1

Query: 7    SLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVKP 186
            +LSRSG+TSLPSNQ+PVKVD                  NGS+  RQP+  GN+ P TVK 
Sbjct: 126  ALSRSGITSLPSNQSPVKVDAVSVTPVTEAPPTSMPV-NGSIPNRQPVPAGNVAPATVKV 184

Query: 187  EPTALAS-VTGPAFPHISSVPRAAS--QAVPSLQTSSPMSTSQDMIANNENAPDMKPAVN 357
            EP  +AS V+GPAFPH SSVPRA S  Q VPSLQTSS  S SQD+I NNENA D KP V+
Sbjct: 185  EPVLVASMVSGPAFPHNSSVPRATSTSQGVPSLQTSSLSSVSQDIITNNENAQDTKPTVS 244

Query: 358  NVTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGTSIGLPS--KTPI---LSNMISS 507
             +   LRPV  A ANV ILN+++ ARQ     ALSGGTS+GLPS  +TP+   +SNMISS
Sbjct: 245  MLP--LRPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMSNMISS 302

Query: 508  ------------------GMTTSVSA------AQTXXXXXXXXXXXXXXXLP------MS 597
                              G+T+  S+      AQ                L       +S
Sbjct: 303  GMTSSVPAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSSNIGIS 362

Query: 598  QPITNLQGSVGLVQ------------TQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 741
            QP+ NLQG+V + Q             QM Q                             
Sbjct: 363  QPLGNLQGAVSMGQQVSGMSQGNLSGAQMVQGGVNMNQNVMSGLGQSVVSSGTGTMIPTP 422

Query: 742  XXXNS---------NHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRL 894
                          N++ +NMP              KY+KVWEG+LSGQRQGQPVFIT+L
Sbjct: 423  GMSQPVQSGMQPLVNNAATNMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKL 482

Query: 895  EGYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK 1074
            EGYR++SASETLAANWPP+MQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQEK
Sbjct: 483  EGYRNSSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEK 542

Query: 1075 KLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            KLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 543  KLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQL 582


>ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X1 [Glycine max]
            gi|571434654|ref|XP_006573256.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X2 [Glycine max]
          Length = 832

 Score =  375 bits (964), Expect = e-101
 Identities = 240/460 (52%), Positives = 275/460 (59%), Gaps = 64/460 (13%)
 Frame = +1

Query: 7    SLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVKP 186
            +LSRSG+TSLPSNQ+PVKVD                  NGS+  RQP+  GN+ P TVK 
Sbjct: 233  ALSRSGITSLPSNQSPVKVDAVSVTPVTEAPPTSMPV-NGSIPNRQPVPAGNVAPATVKV 291

Query: 187  EPTALAS-VTGPAFPHISSVPRAAS--QAVPSLQTSSPMSTSQDMIANNENAPDMKPAVN 357
            EP  +AS V+GPAFPH SSVPRA S  Q VPSLQTSS  S SQD+I NNENA D KP V+
Sbjct: 292  EPVLVASMVSGPAFPHNSSVPRATSTSQGVPSLQTSSLSSVSQDIITNNENAQDTKPTVS 351

Query: 358  NVTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGTSIGLPS--KTPI---LSNMISS 507
             +   LRPV  A ANV ILN+++ ARQ     ALSGGTS+GLPS  +TP+   +SNMISS
Sbjct: 352  MLP--LRPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMSNMISS 409

Query: 508  ------------------GMTTSVSA------AQTXXXXXXXXXXXXXXXLP------MS 597
                              G+T+  S+      AQ                L       +S
Sbjct: 410  GMTSSVPAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSSNIGIS 469

Query: 598  QPITNLQGSVGLVQ------------TQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 741
            QP+ NLQG+V + Q             QM Q                             
Sbjct: 470  QPLGNLQGAVSMGQQVSGMSQGNLSGAQMVQGGVNMNQNVMSGLGQSVVSSGTGTMIPTP 529

Query: 742  XXXNS---------NHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRL 894
                          N++ +NMP              KY+KVWEG+LSGQRQGQPVFIT+L
Sbjct: 530  GMSQPVQSGMQPLVNNAATNMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKL 589

Query: 895  EGYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK 1074
            EGYR++SASETLAANWPP+MQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQEK
Sbjct: 590  EGYRNSSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEK 649

Query: 1075 KLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            KLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 650  KLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQL 689


>gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus vulgaris]
          Length = 863

 Score =  372 bits (955), Expect = e-100
 Identities = 237/462 (51%), Positives = 274/462 (59%), Gaps = 65/462 (14%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHP-GTV 180
            S+LSRSG+TSLPSNQ+PVKVD                  NGS+  RQP+  GN+ P  TV
Sbjct: 232  SALSRSGITSLPSNQSPVKVDAVSVTPVTGAPPTSMPSVNGSIANRQPVPAGNVAPPATV 291

Query: 181  KPEPTALAS-VTGPAFPHISSVPRAAS--QAVPSLQTSSPMSTSQDMIANNENAPDMKPA 351
            K E   + S V+GP FPH SSVPRA S  Q VPSLQTSSP S SQD+I NNENA D KP 
Sbjct: 292  KVEQVPVTSMVSGPPFPHNSSVPRATSTSQVVPSLQTSSPSSVSQDIITNNENAQDTKPT 351

Query: 352  VNNVTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGTSIGLPS--KTPI---LSNMI 501
            V+ +  SLRPV    ANV ILN+++QARQ     ALSGGTS+GLPS  +TP+   +SNMI
Sbjct: 352  VS-MLQSLRPVNPTQANVSILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMI 410

Query: 502  S------------------SGMTTSVSA------AQTXXXXXXXXXXXXXXXLP------ 591
            S                  SG+T+  S+      AQ                L       
Sbjct: 411  SSGMTSSVPAAQNVFPSGQSGITSITSSGPLSVPAQVGQNPGLGSLTSNTSNLSSSSNIG 470

Query: 592  MSQPITNLQGSVGLVQT------------QMAQTXXXXXXXXXXXXXXXXXXXXXXXXXX 735
            +SQP+ NLQG+V + Q             QM Q                           
Sbjct: 471  ISQPLGNLQGAVSMGQQASGMSQGNLSGPQMVQGGVPMNQNAMSALGSSVVSSGNGTMIP 530

Query: 736  XXXXXNS---------NHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFIT 888
                            N++ +NMP              KY+KVWEG+LSGQRQGQPVFIT
Sbjct: 531  TPGMSQQVQSGMQALGNNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFIT 590

Query: 889  RLEGYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQ 1068
            +LEGYR++SASE+LA+NWP +MQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQ
Sbjct: 591  KLEGYRNSSASESLASNWPSVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQ 650

Query: 1069 EKKLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            EKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 651  EKKLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQL 692


>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Solanum lycopersicum]
          Length = 805

 Score =  369 bits (946), Expect = 2e-99
 Identities = 227/434 (52%), Positives = 256/434 (58%), Gaps = 36/434 (8%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++ SRSG+T+L SN +PVK+DV+                N SV+ R PIS GNI P TVK
Sbjct: 231  AAFSRSGLTNLASNHSPVKMDVSSVLPVSGTQSISNSAANVSVISRPPISAGNIPPATVK 290

Query: 184  PEPTALASVTGPAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVNNV 363
             EP  +  +TGP F HI SV R A Q VPSLQ SSP+S SQ+M+++ EN  +MKP V+ +
Sbjct: 291  IEPNTVTPMTGPGFSHIPSV-RPALQPVPSLQASSPLSVSQEMVSHTENVQEMKPIVSGM 349

Query: 364  TPSLRPVGGAAANVRILNDVAQARQALSGGTSI-----------------GLPSKTPILS 492
            T SLRPV  AAANV+ILN VAQA Q L GGTSI                 G+ S  P   
Sbjct: 350  TQSLRPVAAAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMASSVPASQ 409

Query: 493  NMISSG------MTTSVSAAQTXXXXXXXXXXXXXXXLP---------MSQ---PITNLQ 618
             ++SSG      MT +V  A +                P         MSQ   P T + 
Sbjct: 410  AVLSSGQSGVTTMTGAVPLAGSAQNTQNSAPSSFTSTAPSMSGQTVPAMSQGNIPGTQMM 469

Query: 619  GSVGLVQTQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNHSVSNMPXXXXXX 798
             S G    Q   T                                 N + +NMP      
Sbjct: 470  PS-GTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQGQPGMQPVGVNSTSANMPLSQQQT 528

Query: 799  XXXXXXXX-KYIKVWEGNLSGQRQGQPVFITRLEGYRSASASETLAANWPPIMQIVRLIS 975
                     KY+KVWEGNLSGQRQGQPVFITRLEGYRSASASE+LAANWPP MQIVRLIS
Sbjct: 529  SGALPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASESLAANWPPTMQIVRLIS 588

Query: 976  QDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAHRLIGM 1155
            QDHMNNKQYVGKADFLVFRAMNQHGFL QLQEKKLCAVIQLPSQTLLLSVSDKA RLIGM
Sbjct: 589  QDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGM 648

Query: 1156 LFPGDMVVFKPQIP 1197
            LFPGDMVVFKPQIP
Sbjct: 649  LFPGDMVVFKPQIP 662


>ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Fragaria vesca subsp. vesca]
          Length = 855

 Score =  366 bits (940), Expect = 9e-99
 Identities = 232/448 (51%), Positives = 268/448 (59%), Gaps = 51/448 (11%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++LSR G T+LPS  +PVK+D+                 NGSV+ R   SVGN+ P TVK
Sbjct: 233  ATLSRPGSTTLPSIPSPVKMDIAPVASVTGPPPTSMPSVNGSVMNRPSFSVGNVPPATVK 292

Query: 184  PEPTALAS-VTGPAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVNN 360
             EP+ ++S V GPAF H+ SV R  SQ VP+LQTSSP  +S +M  NNE+ PD+KP V+ 
Sbjct: 293  VEPSTVSSMVAGPAFAHVPSV-RPPSQGVPTLQTSSP--SSGEMNTNNESVPDLKPIVSG 349

Query: 361  VTPSLRPVGGAAANVRILNDVAQAR----QALSGGTSIGLPS--KTPI---LSNMISSGM 513
            VT  LRPVG       ILN+++QAR     ALSGGTSIGL +  + P+   +SNMISSGM
Sbjct: 350  VTHQLRPVGS------ILNNISQARVMNSAALSGGTSIGLQNMGQNPMAMHVSNMISSGM 403

Query: 514  TTSVSAAQTXXXXXXXXXXXXXXX-------------------LPMSQPITNLQGSVGLV 636
             +SV+AAQ                                   L MSQP++NLQG V + 
Sbjct: 404  ASSVAAAQNVFSSSAPHTLTQVPQSSGLNTFTSATSNVSGNSNLGMSQPMSNLQGGVSIG 463

Query: 637  QT-----------QMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN---------- 753
            Q+           QM Q                                           
Sbjct: 464  QSVPGMNQNLSGPQMVQNGIGMNPNMMSGHGSAGSSSGTGTMIPTPGISQQAQSGIQSLG 523

Query: 754  -SNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLEGYRSASASETL 930
             +N S+SN P              KY+KVWEGNLSGQRQGQPVFITRLEGYRSASASETL
Sbjct: 524  ANNSSISN-PLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASETL 582

Query: 931  AANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQT 1110
            AANWPP MQIVRLISQDHMNNKQYVG+ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQT
Sbjct: 583  AANWPPTMQIVRLISQDHMNNKQYVGRADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQT 642

Query: 1111 LLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            LLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 643  LLLSVSDKACRLIGMLFPGDMVVFKPQV 670


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  365 bits (938), Expect = 2e-98
 Identities = 222/450 (49%), Positives = 268/450 (59%), Gaps = 53/450 (11%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++LSR G++++ +NQ+PVK+D+                 NG ++ R  I+VG +   TVK
Sbjct: 233  AALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVK 291

Query: 184  PEPTALASVT-GPAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVNN 360
             EP+ + S+T GP FPHI SVPRAASQ VPSLQTSSP STSQ+MI+N +N  D+KP V+ 
Sbjct: 292  VEPSTVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSG 351

Query: 361  VTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGTSI--------------------G 465
            ++ +LRPV  AAANV ILN+++QARQ     ALSGGTSI                    G
Sbjct: 352  ISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSG 411

Query: 466  LPSKTPILSNMISSGMT--TSVSAAQTXXXXXXXXXXXXXXX-------------LPMSQ 600
            + S  P    + SSG +  +S++ + T                            L +SQ
Sbjct: 412  MASSVPATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQ 471

Query: 601  PITN------------LQGSVGLVQTQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 744
            P+              +Q  +G+ Q  M+                               
Sbjct: 472  PLIPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQVQPGMPSL 531

Query: 745  XXNSNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLEGYRSASASE 924
              N+N + +NMP              KY+KVWEGNLSGQRQGQPVFITRLEGYRSASASE
Sbjct: 532  GVNNN-AAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 590

Query: 925  TLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPS 1104
            +LAANWP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPS
Sbjct: 591  SLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPS 650

Query: 1105 QTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            QTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 651  QTLLLSVSDKACRLIGMLFPGDMVVFKPQI 680


>gb|EOY02123.1| Phytochrome and flowering time regulatory protein isoform 1
            [Theobroma cacao]
          Length = 871

 Score =  362 bits (930), Expect = 1e-97
 Identities = 221/459 (48%), Positives = 266/459 (57%), Gaps = 62/459 (13%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++LSR GV SL SNQ+PVK+D+                 NGS++ RQP+SVGN+   T+K
Sbjct: 233  AALSRPGVPSLASNQSPVKMDMASVTSGTGPPPTSVPSVNGSMMSRQPVSVGNVPTATIK 292

Query: 184  PEPTALASV-TGPAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVNN 360
             EPT + S+ TGPAFPHI +VPRA S A+P++QTSSP +TSQ+++ + +N  ++KP+V+ 
Sbjct: 293  VEPTTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSG 352

Query: 361  VTPSLRPVGGAAANVRILNDVAQAR----QALSGGTSI--------------------GL 468
            +T  LRPV   AANV ILN+++QAR     AL+GGTSI                    G+
Sbjct: 353  MTQPLRPVP-PAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGM 411

Query: 469  PSKTPILSNMISSGMTTSVSAAQTXXXXXXXXXXXXXXX---------------LPMSQP 603
             S  P    + SSG +   S   +                              + MSQP
Sbjct: 412  ASSVPPAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQP 471

Query: 604  ITNLQGSVGLVQT------------QMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
            + N+Q  V + Q+            QM Q+                              
Sbjct: 472  MGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNMSGLGPSTVSSGTGTMFPIPGMS 531

Query: 748  XN----------SNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLE 897
                        SN S ++MP              KY+KVWEGNLSGQRQGQPVFITRLE
Sbjct: 532  QQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLE 591

Query: 898  GYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK 1077
            GYRSASASETLAA+WP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK
Sbjct: 592  GYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK 651

Query: 1078 LCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            LCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 652  LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 690


>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Cucumis sativus]
          Length = 858

 Score =  359 bits (921), Expect = 1e-96
 Identities = 230/458 (50%), Positives = 270/458 (58%), Gaps = 61/458 (13%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++LSR G+TSLP+NQ+PVK+D++                NG ++ RQP+SV N    TVK
Sbjct: 231  AALSRPGITSLPANQSPVKMDISSVVPVTGPPPTTTPSVNGPIINRQPVSVPNGPTATVK 290

Query: 184  PEPTALASVT-GPAFP-HISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVN 357
             EP  + S+T G  +P H+ SV RAASQ VPSLQTSSP+S SQ+MI NNEN  D+KP V 
Sbjct: 291  VEPNTVTSMTNGSGYPPHMPSVVRAASQGVPSLQTSSPLS-SQEMITNNENTQDLKPLVT 349

Query: 358  NVTPSLRPVGGAAANVRILNDVAQAR----QALSGGTSIGLPS--KTPI---LSNMISSG 510
             V   +R +G   ANV ILN+++QAR     AL+GGTSIGLPS  +TPI   +SNMISSG
Sbjct: 350  GVPQPVRSLG--PANVSILNNISQARVMSTAALNGGTSIGLPSMGQTPIAMHVSNMISSG 407

Query: 511  M-----------------TTSVSAAQTXXXXXXXXXXXXXXX----------LPMSQPIT 609
            M                  TS++ + T                         +  SQ + 
Sbjct: 408  MGSSVPAAQNVFSSGQSGMTSINGSSTLSQVAPNSGISSLTSGNNNISGNPNIATSQAVG 467

Query: 610  NLQGSVGLVQ------------TQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 753
            NLQGSV + Q            TQ+ Q+                                
Sbjct: 468  NLQGSVSVSQSVPGISQGNLAGTQVVQSGIGVSQNVMSNLTQPGVSSGNGTMIPTPGMPQ 527

Query: 754  S----------NHSVSNMPXXXXXXXXXXXXXX-KYIKVWEGNLSGQRQGQPVFITRLEG 900
                       N++ +NMP               KY+K WEGNLSGQRQGQPVFITR+EG
Sbjct: 528  QVQNGMHSLGMNNAAANMPLPQHSAGALQQQAQSKYVKFWEGNLSGQRQGQPVFITRMEG 587

Query: 901  YRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 1080
            YRSASAS+ LAANWP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL
Sbjct: 588  YRSASASDKLAANWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 647

Query: 1081 CAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            CAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 648  CAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 685


>gb|EOY02124.1| Phytochrome and flowering time regulatory protein isoform 2
            [Theobroma cacao]
          Length = 860

 Score =  358 bits (919), Expect = 3e-96
 Identities = 221/459 (48%), Positives = 266/459 (57%), Gaps = 62/459 (13%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++LSR GV SL SNQ+PVK+D+                 NGS++ RQP+SVGN+   T+K
Sbjct: 233  AALSRPGVPSLASNQSPVKMDMASVTSV-----------NGSMMSRQPVSVGNVPTATIK 281

Query: 184  PEPTALASV-TGPAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVNN 360
             EPT + S+ TGPAFPHI +VPRA S A+P++QTSSP +TSQ+++ + +N  ++KP+V+ 
Sbjct: 282  VEPTTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSG 341

Query: 361  VTPSLRPVGGAAANVRILNDVAQAR----QALSGGTSI--------------------GL 468
            +T  LRPV   AANV ILN+++QAR     AL+GGTSI                    G+
Sbjct: 342  MTQPLRPVP-PAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGM 400

Query: 469  PSKTPILSNMISSGMTTSVSAAQTXXXXXXXXXXXXXXX---------------LPMSQP 603
             S  P    + SSG +   S   +                              + MSQP
Sbjct: 401  ASSVPPAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQP 460

Query: 604  ITNLQGSVGLVQT------------QMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
            + N+Q  V + Q+            QM Q+                              
Sbjct: 461  MGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNMSGLGPSTVSSGTGTMFPIPGMS 520

Query: 748  XN----------SNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLE 897
                        SN S ++MP              KY+KVWEGNLSGQRQGQPVFITRLE
Sbjct: 521  QQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLE 580

Query: 898  GYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK 1077
            GYRSASASETLAA+WP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK
Sbjct: 581  GYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK 640

Query: 1078 LCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            LCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 641  LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 679


>ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X1 [Cicer arietinum]
          Length = 818

 Score =  357 bits (916), Expect = 6e-96
 Identities = 226/456 (49%), Positives = 264/456 (57%), Gaps = 60/456 (13%)
 Frame = +1

Query: 7    SLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVKP 186
            +LSRSG+T+LPSNQ+PVKVD                  NG++  RQPI  GN+ P TVK 
Sbjct: 233  ALSRSGITNLPSNQSPVKVDTVSVTPVTGGPPTSLPSVNGTIANRQPIPAGNVTPATVKV 292

Query: 187  EPTALAS-VTGPAFPHISSVPRAAS--QAVPSLQTSSPMSTSQDMIANNENAPDMKPAVN 357
            E   + S +TGPAFPH SS  RA S  Q  PSLQ SSP S SQD++ +NENA D KP V+
Sbjct: 293  EQVPVTSMITGPAFPHNSSAARATSTGQGNPSLQASSPSSVSQDIMTSNENAQDTKPIVS 352

Query: 358  NVTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGTSIGLPS--KTPIL--------- 489
             + P LRPV  A  N  ILN+++QARQ     ALSGGTS+GLPS  +TP+          
Sbjct: 353  MLQP-LRPVNPAQVNGNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISS 411

Query: 490  ---------SNMISSG--MTTSVSAAQTXXXXXXXXXXXXXXXLP-------------MS 597
                      N+ SSG  + TS++++ +               L              +S
Sbjct: 412  ATTSSGPTGQNVFSSGPPVITSITSSGSLTAPAQVAQNTGLASLTSATSNLSSSSNTGIS 471

Query: 598  QPITNLQGSVGLVQ------------TQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 741
            Q + NLQG+V + Q             QM Q                             
Sbjct: 472  QSLANLQGAVSMGQQASGMNPGNLSGAQMVQGGVNMNQNVMNGLGQSVVSSGNGAMIPTP 531

Query: 742  XXXNSNHS-----VSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLEGYR 906
                   S     V+N                KYI+VWEG+LSGQRQGQPVFIT+LEGYR
Sbjct: 532  GMPQQVQSGMQPLVNNAASANLPLSQQTSAQSKYIRVWEGSLSGQRQGQPVFITKLEGYR 591

Query: 907  SASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCA 1086
            S+SASETLAANWPP+MQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQEKKLCA
Sbjct: 592  SSSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCA 651

Query: 1087 VIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            VIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 652  VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQL 687


>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus trichocarpa]
            gi|222864996|gb|EEF02127.1| PHYTOCHROME AND FLOWERING
            TIME 1 family protein [Populus trichocarpa]
          Length = 796

 Score =  357 bits (916), Expect = 6e-96
 Identities = 223/462 (48%), Positives = 258/462 (55%), Gaps = 65/462 (14%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++LS  GVTSL SNQ PVKVD+                 NGS+  R  ISVGN+   TVK
Sbjct: 224  AALSLPGVTSLTSNQTPVKVDIASVTSVTGPAPTSIPSVNGSITNRPTISVGNVPTATVK 283

Query: 184  PEPTALASVT-GPAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVNN 360
             EP+ + S+  GP FPH  SVPR ASQ VP LQTSSP +T+QDM  + ++  D+KP V+ 
Sbjct: 284  VEPSTITSMANGPTFPHNPSVPRPASQGVPILQTSSPSTTTQDMATSGDDVQDLKPNVSV 343

Query: 361  VTPSLRPVGGAAANVRILNDVAQARQA-----LSGGTSI--------------------G 465
            +T S RP   AAANV ILN+++QARQ      LSGGTS+                    G
Sbjct: 344  MTQSARPGPPAAANVSILNNISQARQVMNSAGLSGGTSLGLPSINQTSVAMHMSNMISSG 403

Query: 466  LPSKTPILSNMISSGM--TTSVSAAQTXXXXXXXXXXXXXXXLP--------------MS 597
            + S  P    + SSG    +S++ + T                               +S
Sbjct: 404  MASSVPAAPTVFSSGQPGVSSITGSGTLTGTTQIGPNSGLGSFTSATSNVSGNSNLGRIS 463

Query: 598  QPITNLQGSVGLVQT------------QMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 741
            QP+ NLQ  V + Q+            QM Q+                            
Sbjct: 464  QPMGNLQAGVSIGQSAPGMSQGNISGAQMVQSGMGANPNTMSGLGPSGVSSGLNTMIPTP 523

Query: 742  XXXN-----------SNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFIT 888
                           +N+S  N+               KY+KVWEGNLSGQRQGQPVFIT
Sbjct: 524  GMSQQVQSGMQPLGANNNSADNLSMSQQTAGGLQPPQSKYVKVWEGNLSGQRQGQPVFIT 583

Query: 889  RLEGYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQ 1068
            RLEGYRSASASETLAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQ
Sbjct: 584  RLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQ 643

Query: 1069 EKKLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            EKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 644  EKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 685


>ref|XP_004513304.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Cicer arietinum]
          Length = 751

 Score =  353 bits (906), Expect = 8e-95
 Identities = 210/399 (52%), Positives = 247/399 (61%), Gaps = 3/399 (0%)
 Frame = +1

Query: 7    SLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVKP 186
            +LSRSG+T+LPSNQ+PVKVD                  NG++  RQPI  GN+ P TVK 
Sbjct: 233  ALSRSGITNLPSNQSPVKVDTVSVTPVTGGPPTSLPSVNGTIANRQPIPAGNVTPATVKV 292

Query: 187  EPTALAS-VTGPAFPHISSVPRAAS--QAVPSLQTSSPMSTSQDMIANNENAPDMKPAVN 357
            E   + S +TGPAFPH SS  RA S  Q  PSLQ SSP S SQD++ +NENA D KP V+
Sbjct: 293  EQVPVTSMITGPAFPHNSSAARATSTGQGNPSLQASSPSSVSQDIMTSNENAQDTKPIVS 352

Query: 358  NVTPSLRPVGGAAANVRILNDVAQARQALSGGTSIGLPSKTPILSNMISSGMTTSVSAAQ 537
             + P LRPV  A  N  ILN+++QARQ         L S T  LS+  ++G++ S++  Q
Sbjct: 353  MLQP-LRPVNPAQVNGNILNNLSQARQVAQNTGLASLTSATSNLSSSSNTGISQSLANLQ 411

Query: 538  TXXXXXXXXXXXXXXXLPMSQPITNLQGSVGLVQTQMAQTXXXXXXXXXXXXXXXXXXXX 717
                            L  +Q +   QG V + Q  M                       
Sbjct: 412  GAVSMGQQASGMNPGNLSGAQMV---QGGVNMNQNVMNGLGQSVVSSGNGAMIPTPGMPQ 468

Query: 718  XXXXXXXXXXXNSNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLE 897
                       N+  + +N+P              KYI+VWEG+LSGQRQGQPVFIT+LE
Sbjct: 469  QVQSGMQPLVNNA--ASANLPLSQQTSAQS-----KYIRVWEGSLSGQRQGQPVFITKLE 521

Query: 898  GYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK 1077
            GYRS+SASETLAANWPP+MQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQEKK
Sbjct: 522  GYRSSSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKK 581

Query: 1078 LCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            LCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 582  LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQL 620


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  351 bits (900), Expect = 4e-94
 Identities = 220/460 (47%), Positives = 258/460 (56%), Gaps = 63/460 (13%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++LSR GV +L  NQNPVK+D+                 NG  + R PISVGN+   TVK
Sbjct: 232  AALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVK 289

Query: 184  PEPTALAS-VTGPAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVNN 360
             EP+ + S V GP FPHI SV R ASQ VPSLQTSSP STSQ+MI + ++ P++KP V+ 
Sbjct: 290  VEPSTVTSMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSG 349

Query: 361  VTPSLRPVGGAAANVRILNDVAQARQA-----------------------------LSGG 453
            ++  LRP+  AAANV ILN+++QARQ                              +S G
Sbjct: 350  MSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSG 409

Query: 454  TSIGLPSKTPILSNMISS-----GMTTSVSAAQTXXXXXXXXXXXXXXXLP------MSQ 600
             +  +P+  P+ S+  S      G  T    +Q                L       +SQ
Sbjct: 410  MASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQ 469

Query: 601  PITNLQG------SVGLVQT-----QMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
            P+  LQG      SVG+ Q      QM Q                               
Sbjct: 470  PMGTLQGGASMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGM 529

Query: 748  XN-----------SNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRL 894
                         +N++  NM               KY+KVWEG+LSGQRQGQPVFIT+L
Sbjct: 530  SQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKL 589

Query: 895  EGYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK 1074
            EGYRSASASETLAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK
Sbjct: 590  EGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK 649

Query: 1075 KLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            KLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 650  KLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 689


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
            gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
            hypothetical protein CICLE_v10030710mg [Citrus
            clementina]
          Length = 830

 Score =  351 bits (900), Expect = 4e-94
 Identities = 220/460 (47%), Positives = 258/460 (56%), Gaps = 63/460 (13%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPGTVK 183
            ++LSR GV +L  NQNPVK+D+                 NG  + R PISVGN+   TVK
Sbjct: 233  AALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVK 290

Query: 184  PEPTALAS-VTGPAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPAVNN 360
             EP+ + S V GP FPHI SV R ASQ VPSLQTSSP STSQ+MI + ++ P++KP V+ 
Sbjct: 291  VEPSTVTSMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSG 350

Query: 361  VTPSLRPVGGAAANVRILNDVAQARQA-----------------------------LSGG 453
            ++  LRP+  AAANV ILN+++QARQ                              +S G
Sbjct: 351  MSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSG 410

Query: 454  TSIGLPSKTPILSNMISS-----GMTTSVSAAQTXXXXXXXXXXXXXXXLP------MSQ 600
             +  +P+  P+ S+  S      G  T    +Q                L       +SQ
Sbjct: 411  MASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQ 470

Query: 601  PITNLQG------SVGLVQT-----QMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
            P+  LQG      SVG+ Q      QM Q                               
Sbjct: 471  PMGTLQGGASMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGM 530

Query: 748  XN-----------SNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRL 894
                         +N++  NM               KY+KVWEG+LSGQRQGQPVFIT+L
Sbjct: 531  SQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKL 590

Query: 895  EGYRSASASETLAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK 1074
            EGYRSASASETLAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK
Sbjct: 591  EGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK 650

Query: 1075 KLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQI 1194
            KLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 651  KLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 690


>ref|XP_006415884.1| hypothetical protein EUTSA_v10006778mg [Eutrema salsugineum]
            gi|557093655|gb|ESQ34237.1| hypothetical protein
            EUTSA_v10006778mg [Eutrema salsugineum]
          Length = 852

 Score =  334 bits (856), Expect = 5e-89
 Identities = 210/449 (46%), Positives = 251/449 (55%), Gaps = 51/449 (11%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVD---VTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPG 174
            ++LS S  T+LP  Q+PVKVD   V                 NG +L RQP+S+G +   
Sbjct: 229  AALSHSA-TNLPQTQSPVKVDRSTVAPSLPVTGQPPAPVPSANGPILNRQPVSIGPVPTA 287

Query: 175  TVKPEPTALASVTGPA-FPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPA 351
            TVK EP+ + S+   + FPHI SV R A+QA+PS+QTSSP   SQ+M+ N ENAPD+KP 
Sbjct: 288  TVKVEPSTVPSMAAVSTFPHIQSVARPATQAIPSIQTSSPSPVSQEMVTNAENAPDVKPV 347

Query: 352  VNNVTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGT----------------SIGL 468
            V  +TP LR      ANV +LN+++Q RQ     AL+G                  S G+
Sbjct: 348  VTGMTPPLRTGPPGGANVNLLNNLSQVRQVMSSAALAGAASSTGQSAVAMHMSNMISTGM 407

Query: 469  PSKTPILSNMISSG------------MTTSVSAAQTXXXXXXXXXXXXXXX---LPMSQP 603
             +  P    + SSG            +  +V A Q+                  L +SQP
Sbjct: 408  ATSLPPSQTVFSSGQQGITSMAGSGALMGTVQAGQSPGPNNSFSPQTTSNVASNLGVSQP 467

Query: 604  ITNL-----------QGSVGLVQTQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 750
            +  +           QG + + Q  M+                                 
Sbjct: 468  MPGMNQGSHSGAQMMQGGIPMNQNMMSGLGQGNVSSGTGGMMPTPGVGQQAQSGIQQLG- 526

Query: 751  NSNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLEGYRSASASETL 930
             SN S  NM               KY+KVWEGNLSGQRQGQPV ITRLEGYRSASAS++L
Sbjct: 527  GSNSSAPNMQLSQPSSAALQTSQSKYVKVWEGNLSGQRQGQPVLITRLEGYRSASASDSL 586

Query: 931  AANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQT 1110
            AANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQ+KKLCAVIQLPSQT
Sbjct: 587  AANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGFLGQLQDKKLCAVIQLPSQT 646

Query: 1111 LLLSVSDKAHRLIGMLFPGDMVVFKPQIP 1197
            LLLSVSDKA RLIGMLFPGDMVVFKPQIP
Sbjct: 647  LLLSVSDKACRLIGMLFPGDMVVFKPQIP 675


>dbj|BAJ34376.1| unnamed protein product [Thellungiella halophila]
          Length = 852

 Score =  331 bits (848), Expect = 4e-88
 Identities = 209/449 (46%), Positives = 250/449 (55%), Gaps = 51/449 (11%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVD---VTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPG 174
            ++LS S  T+LP  Q+PVKVD   V                 NG +L RQP+S+G +   
Sbjct: 229  AALSHSA-TNLPQTQSPVKVDRSTVAPSLPVTGQPPAPVPSANGPILNRQPVSIGPVPTA 287

Query: 175  TVKPEPTALASVTGPA-FPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPA 351
            TVK EP+ + S+   + FPHI SV R A+QA+PS+QTSSP   SQ+M+ N ENAPD+KP 
Sbjct: 288  TVKVEPSTVPSMAAVSTFPHIQSVARPATQAIPSIQTSSPSPVSQEMVTNAENAPDVKPV 347

Query: 352  VNNVTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGT----------------SIGL 468
            V  +TP LR      ANV +LN+++Q RQ     AL+G                  S G+
Sbjct: 348  VTGMTPPLRTGPPGGANVNLLNNLSQVRQVMSSAALAGAASSTGQSAVAMHMSNMISTGM 407

Query: 469  PSKTPILSNMISSG------------MTTSVSAAQTXXXXXXXXXXXXXXX---LPMSQP 603
             +  P    + SSG            +  +V A Q+                  L +SQP
Sbjct: 408  ATSLPPSQTVFSSGQQGITSMAGSGALMGTVQAGQSPGPNNSFSPQTTSNVASNLGVSQP 467

Query: 604  ITNL-----------QGSVGLVQTQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 750
            +  +           QG + + Q  M+                                 
Sbjct: 468  MPGMNQGSHSGAQMMQGGIPMNQNMMSGLGQGNVSSGTGGMMPTPGVGQQAQSGIQQLG- 526

Query: 751  NSNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLEGYRSASASETL 930
             SN S  NM               KY+KVWEGNLSGQRQGQPV ITRLEGYRSASAS++L
Sbjct: 527  GSNSSAPNMQLSQPSSAALQTSQSKYVKVWEGNLSGQRQGQPVLITRLEGYRSASASDSL 586

Query: 931  AANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQT 1110
            AANWPP MQIVRLISQDHMNNKQYVGKAD LVFRAM+QHGFLGQLQ+KKLCAVIQLPSQT
Sbjct: 587  AANWPPTMQIVRLISQDHMNNKQYVGKADSLVFRAMSQHGFLGQLQDKKLCAVIQLPSQT 646

Query: 1111 LLLSVSDKAHRLIGMLFPGDMVVFKPQIP 1197
            LLLSVSDKA RLIGMLFPGDMVVFKPQIP
Sbjct: 647  LLLSVSDKACRLIGMLFPGDMVVFKPQIP 675


>ref|XP_006306776.1| hypothetical protein CARUB_v10008315mg [Capsella rubella]
            gi|482575487|gb|EOA39674.1| hypothetical protein
            CARUB_v10008315mg [Capsella rubella]
          Length = 827

 Score =  330 bits (845), Expect = 1e-87
 Identities = 209/450 (46%), Positives = 245/450 (54%), Gaps = 52/450 (11%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVD---VTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPG 174
            ++LS S  T+LP  Q+PVK+D   V                 NG +L RQP+SVG +   
Sbjct: 234  AALSHSA-TNLPQTQSPVKMDRATVAPSLPVTGQPPAPVTSANGPILNRQPVSVGPVPTA 292

Query: 175  TVKPEPTALASVTG-PAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPA 351
            TVK EP+ + S+   P+FPHI SV R A+QA+PS+QTSS    SQDM+ N ENAPD+KP 
Sbjct: 293  TVKVEPSTVTSMAPVPSFPHIPSVARPATQAIPSIQTSSASPASQDMVTNAENAPDIKPV 352

Query: 352  V-NNVTPSLRPVGGAAANVRILNDVAQARQALSGGT---------------------SIG 465
            V   +T  LR      ANV +LN+++Q RQ +S                        S G
Sbjct: 353  VVGGMTAPLRAGPPGGANVNLLNNLSQVRQVMSSAALAGAASSVGQSAVAMHMSNMISTG 412

Query: 466  LPSKTPILSNMISSGMTTSVSAAQ---------------TXXXXXXXXXXXXXXXLPMSQ 600
            + +  P   N  SSG   + S A                T               L +SQ
Sbjct: 413  MATSLPPSQNAFSSGQQGTTSMASSGALMGSAQTGQSVGTNNAFSPQTTSNVASNLGVSQ 472

Query: 601  PITNL-----------QGSVGLVQTQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
            P+  +           QG + + Q  M+                                
Sbjct: 473  PMQGMNQGSHSGAQMMQGGISMNQNMMSGLGHGNVSSGTGGMMPTPGVAQQAQSVIQQLG 532

Query: 748  XNSNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLEGYRSASASET 927
              SN S  NM               KY+KVWEGNLSGQRQGQPV ITRLEGYRSASAS+T
Sbjct: 533  -GSNSSGPNMQLSQPSSGALQTSQSKYVKVWEGNLSGQRQGQPVLITRLEGYRSASASDT 591

Query: 928  LAANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQ 1107
            LAANWP  MQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQ+KKLCAVIQLPSQ
Sbjct: 592  LAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGFLGQLQDKKLCAVIQLPSQ 651

Query: 1108 TLLLSVSDKAHRLIGMLFPGDMVVFKPQIP 1197
            TLLLSVSDKA RLIGMLFPGDMVVFKPQIP
Sbjct: 652  TLLLSVSDKACRLIGMLFPGDMVVFKPQIP 681


>ref|NP_001077596.1| mediator of RNA polymerase II transcription subunit 25 [Arabidopsis
            thaliana] gi|332192519|gb|AEE30640.1| mediator of RNA
            polymerase II transcription subunit 25 [Arabidopsis
            thaliana]
          Length = 727

 Score =  328 bits (841), Expect = 3e-87
 Identities = 210/449 (46%), Positives = 251/449 (55%), Gaps = 51/449 (11%)
 Frame = +1

Query: 4    SSLSRSGVTSLPSNQNPVKVD---VTXXXXXXXXXXXXXXXXNGSVLVRQPISVGNIHPG 174
            ++LS S  T+LP  Q+PVKVD   V                 NG +  RQP+SVG +   
Sbjct: 124  AALSHSA-TNLPQTQSPVKVDRATVAPSIPVTGQPPAPVSSANGPIQNRQPVSVGPVPTA 182

Query: 175  TVKPEPTALASVTG-PAFPHISSVPRAASQAVPSLQTSSPMSTSQDMIANNENAPDMKPA 351
            TVK EP+ + S+   P+FPHI +V R A+QA+PS+QTSS    SQDM++N ENAPD+KP 
Sbjct: 183  TVKVEPSTVTSMAPVPSFPHIPAVARPATQAIPSIQTSSASPVSQDMVSNAENAPDIKPV 242

Query: 352  V-NNVTPSLRPVGGAAANVRILNDVAQARQ-----ALSGGT----------------SIG 465
            V + +TP LR      ANV +LN+++Q RQ     AL+G                  S G
Sbjct: 243  VVSGMTPPLRTGPPGGANVNLLNNLSQVRQVMSSAALAGAASSVGQSAVAMHMSNMISTG 302

Query: 466  LPSKTPILSNMISSGMTTSVS---------AAQTXXXXXXXXXXXXXXX------LPMSQ 600
            + +  P    + S+G     S         +AQT                     L +SQ
Sbjct: 303  MATSLPPSQTVFSTGQQGITSMAGSGALMGSAQTGQSPGPNNAFSPQTTSNVASNLGVSQ 362

Query: 601  PITNL----------QGSVGLVQTQMAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 750
            P+  +          QG + + Q  M+                                 
Sbjct: 363  PMQGMNQGSHSGAMMQGGISMNQNMMSGLGQGNVSSGTGGMMPTPGVGQQAQSGIQQLG- 421

Query: 751  NSNHSVSNMPXXXXXXXXXXXXXXKYIKVWEGNLSGQRQGQPVFITRLEGYRSASASETL 930
             SN S  NM               KY+KVWEGNLSGQRQGQPV ITRLEGYRSASAS++L
Sbjct: 422  GSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNLSGQRQGQPVLITRLEGYRSASASDSL 481

Query: 931  AANWPPIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQT 1110
            AANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQ+KKLCAVIQLPSQT
Sbjct: 482  AANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGFLGQLQDKKLCAVIQLPSQT 541

Query: 1111 LLLSVSDKAHRLIGMLFPGDMVVFKPQIP 1197
            LLLSVSDKA RLIGMLFPGDMVVFKPQIP
Sbjct: 542  LLLSVSDKACRLIGMLFPGDMVVFKPQIP 570