BLASTX nr result

ID: Rehmannia26_contig00001307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00001307
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234448.1| CONSTANS-like protein [Solanum lycopersicum]...    58   1e-06
ref|NP_001240941.1| zinc finger protein CONSTANS-LIKE 5-like [Gl...    58   1e-06

>ref|NP_001234448.1| CONSTANS-like protein [Solanum lycopersicum]
           gi|186915025|gb|ACC95379.1| CONSTANS-like protein
           [Solanum lycopersicum] gi|365222864|gb|AEW69784.1|
           Hop-interacting protein THI010 [Solanum lycopersicum]
          Length = 386

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
 Frame = -2

Query: 334 KLETCTAQNGYIPDSWISTNPTVTTKFPADIKP---EFFISDSDQFLDFDNYQIC----- 179
           K++TC   +    D WI  N T+T+K P + +    +F  +DS+ FLDFD Y  C     
Sbjct: 147 KVDTCIGHHENNNDPWIPPN-TITSKLPLNTEMKGMDFIFTDSENFLDFD-YPACVDTQS 204

Query: 178 --------DGLVPVQTTIKPPVHAQLTHHHSPENRFEIDFTRSNITCYN 56
                   D +VPVQ     P+ +   HH   E  FEIDFT+S+I  YN
Sbjct: 205 QPHYNSSNDSVVPVQANT--PIKSLPFHHQ--EKHFEIDFTQSHIKSYN 249


>ref|NP_001240941.1| zinc finger protein CONSTANS-LIKE 5-like [Glycine max]
           gi|260513720|gb|ACX42572.1| CONSTANS-like zinc finger
           protein [Glycine max]
          Length = 365

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
 Frame = -2

Query: 316 AQNGYIPD-----SWISTNPTVTTKF---PADIKPEFFISDSDQFLDFD--------NYQ 185
           A + + PD     +W+  NP   +K    P     E F S+ D FLDFD        N  
Sbjct: 138 ASDVFAPDDSDSAAWLIPNPNFGSKLMDAPEIKSKEIFFSEMDPFLDFDYSNSFQNHNSA 197

Query: 184 ICDGLVPVQT--TIKPPVHAQLTHHHSPENRFEIDFTRSNITCYN 56
           + D +VPVQT  ++ PP      HHH  E  F+IDF RS ++ +N
Sbjct: 198 VNDSVVPVQTKPSLAPPPINNHQHHHQSETCFDIDFCRSKLSSFN 242


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