BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00000197
         (588 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   181   1e-43
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...   130   2e-31

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  181 bits (459), Expect = 1e-43
 Identities = 96/163 (58%), Positives = 113/163 (69%), Gaps = 2/163 (1%)
 Frame = +1

Query: 13  RKGVVTLVETSRDFTLFEDNTSAVCVIP--GQTPAEAESLKREFAKRALVFSGRRLQPVG 186
           RKGVVTLVET +DF LF D  +   V+P  GQT  EAE+L+REF KR L FSGRRL   G
Sbjct: 127 RKGVVTLVETEKDFALFGDEFTQNQVVPCPGQTLPEAEALQREFHKRTLAFSGRRLSVSG 186

Query: 187 LPEDLSSDPFASPLPRGPVPARRIAHVDPFTWANMSYGQCTRVLALYKQLCSCFGARMFQ 366
           LP    SDPFASP P  P    ++AHVDP +W  MS+GQC+R L LYKQLCSCFG +MF 
Sbjct: 187 LPS--GSDPFASPSPVRPALTPKVAHVDPVSWEGMSFGQCSRALTLYKQLCSCFGVKMFS 244

Query: 367 STLYIEAVRKVCKLADVVPVSIPEFIGRLGQVDFGAAPAHVYV 495
           S+LY  AVRKV +L +  PV+IPE   RLGQVD  A   H++V
Sbjct: 245 SSLYGMAVRKVLRLREDFPVAIPENFARLGQVDRDARAVHLFV 287


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score =  130 bits (326), Expect(2) = 2e-31
 Identities = 74/139 (53%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
 Frame = +1

Query: 10  ARKGVVTLVETSRDFTLFEDNTSAVCVIP--GQTPAEAESLKREFAKRALVFSGRRLQPV 183
           ARKGVVTLVET +DF LF D  +   V+P  GQT +EAESL+REF KRA  FSG+RL   
Sbjct: 126 ARKGVVTLVETEKDFALFCDEFTQNQVVPCPGQTLSEAESLQREFHKRAFAFSGKRLSVS 185

Query: 184 GLPEDLSSDPFASPLPR-GPVPARRIAHVDPFTWANMSYGQCTRVLALYKQLCSCFGARM 360
           GLPE     P  S L R       +  HVDP +W  MS+GQC+R L LY+QLC CFG +M
Sbjct: 186 GLPEG----PIPSLLLRQSACNCPKGCHVDPVSWEGMSFGQCSRALTLYRQLCGCFGMKM 241

Query: 361 FQSTLYIEAVRKVCKLADV 417
           F S+LY  AVR+   L  +
Sbjct: 242 FSSSLYGMAVRRFSALGKI 260



 Score = 31.6 bits (70), Expect(2) = 2e-31
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 485 TFMYSCT*SRRVCAMLSAGTWALFKD 562
           T +YS T S R   M+ +GTWA FKD
Sbjct: 283 TSLYSYTSSSRFVPMIRSGTWAFFKD 308