BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00000192
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   183   3e-44
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...   130   1e-32

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  183 bits (465), Expect = 3e-44
 Identities = 97/163 (59%), Positives = 112/163 (68%), Gaps = 2/163 (1%)
 Frame = +1

Query: 1   RKGVVTLVETSRDFTLFEDN--TSAVCAIPGQTPAEAESLKREFAKRALVFSGRRLQPVG 174
           RKGVVTLVET +DF LF D    + V   PGQT  EAE+L+REF KR L FSGRRL   G
Sbjct: 127 RKGVVTLVETEKDFALFGDEFTQNQVVPCPGQTLPEAEALQREFHKRTLAFSGRRLSVSG 186

Query: 175 LPEDLSSDPFASPLPRGPVPARRIAHVDPFTWANMSYGQCTRVLALYKQLCSCFGAKMFQ 354
           LP    SDPFASP P  P    ++AHVDP +W  MS+GQC+R L LYKQLCSCFG KMF 
Sbjct: 187 LPS--GSDPFASPSPVRPALTPKVAHVDPVSWEGMSFGQCSRALTLYKQLCSCFGVKMFS 244

Query: 355 STLYTEAVRKVCKLTDVVPVSIPEFIGRLGQVDFGAAPAHVYV 483
           S+LY  AVRKV +L +  PV+IPE   RLGQVD  A   H++V
Sbjct: 245 SSLYGMAVRKVLRLREDFPVAIPENFARLGQVDRDARAVHLFV 287


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score =  130 bits (326), Expect(2) = 1e-32
 Identities = 74/135 (54%), Positives = 86/135 (63%), Gaps = 3/135 (2%)
 Frame = +1

Query: 1   RKGVVTLVETSRDFTLFEDN--TSAVCAIPGQTPAEAESLKREFAKRALVFSGRRLQPVG 174
           RKGVVTLVET +DF LF D    + V   PGQT +EAESL+REF KRA  FSG+RL   G
Sbjct: 127 RKGVVTLVETEKDFALFCDEFTQNQVVPCPGQTLSEAESLQREFHKRAFAFSGKRLSVSG 186

Query: 175 LPEDLSSDPFASPLPR-GPVPARRIAHVDPFTWANMSYGQCTRVLALYKQLCSCFGAKMF 351
           LPE     P  S L R       +  HVDP +W  MS+GQC+R L LY+QLC CFG KMF
Sbjct: 187 LPEG----PIPSLLLRQSACNCPKGCHVDPVSWEGMSFGQCSRALTLYRQLCGCFGMKMF 242

Query: 352 QSTLYTEAVRKVCKL 396
            S+LY  AVR+   L
Sbjct: 243 SSSLYGMAVRRFSAL 257



 Score = 36.2 bits (82), Expect(2) = 1e-32
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +2

Query: 473 TFMYSYTCSRRVCAMLSAGTWALFKD 550
           T +YSYT S R   M+ +GTWA FKD
Sbjct: 283 TSLYSYTSSSRFVPMIRSGTWAFFKD 308