BLASTX nr result
ID: Rehmannia26_contig00000140
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00000140
(374 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein C... 83 4e-14
gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotia... 82 6e-14
gb|EXC32489.1| Chlorophyll a-b binding protein CP26 [Morus notab... 81 1e-13
ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein C... 81 1e-13
gb|ACU23386.1| unknown [Glycine max] 81 1e-13
dbj|BAO50255.1| chloroplast chlorophyll AB-binding protein CP26,... 81 2e-13
emb|CAA78900.1| Lhcb5 protein [Pinus sylvestris] gi|1093837|prf|... 81 2e-13
ref|XP_006288402.1| hypothetical protein CARUB_v10001659mg [Caps... 81 2e-13
gb|EMJ03055.1| hypothetical protein PRUPE_ppa009496mg [Prunus pe... 81 2e-13
ref|XP_004241878.1| PREDICTED: chlorophyll a-b binding protein C... 81 2e-13
ref|XP_004241877.1| PREDICTED: chlorophyll a-b binding protein C... 81 2e-13
gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis... 81 2e-13
ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidops... 81 2e-13
emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycoper... 81 2e-13
ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arab... 81 2e-13
ref|XP_006441835.1| hypothetical protein CICLE_v10021452mg [Citr... 80 2e-13
gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicu... 80 2e-13
gb|ACN40554.1| unknown [Picea sitchensis] 80 2e-13
gb|ACN40433.1| unknown [Picea sitchensis] 80 2e-13
gb|ABK23587.1| unknown [Picea sitchensis] 80 2e-13
>ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
[Vitis vinifera] gi|147770824|emb|CAN76428.1|
hypothetical protein VITISV_023565 [Vitis vinifera]
gi|297734735|emb|CBI16969.3| unnamed protein product
[Vitis vinifera]
Length = 290
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTG+GPVENLAAHLSDPFGNNLLTVI+G+AERAPTL
Sbjct: 249 FFIQAYVTGEGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 290
>gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
Length = 285
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTG+GPVENLAAHLSDPFGNNLLTVI+G+AERAPTL
Sbjct: 244 FFIQAYVTGKGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 285
>gb|EXC32489.1| Chlorophyll a-b binding protein CP26 [Morus notabilis]
Length = 363
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF QAYVTG+GPVENLA HLSDPFGNNLLTVI+GSAERAPTL
Sbjct: 322 FFFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL 363
>ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
[Glycine max]
Length = 289
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
F+ QAYVTG+GPVENLA HLSDPFGNNLLTVISGSAERAPTL
Sbjct: 248 FYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGSAERAPTL 289
>gb|ACU23386.1| unknown [Glycine max]
Length = 289
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
F+ QAYVTG+GPVENLA HLSDPFGNNLLTVISGSAERAPTL
Sbjct: 248 FYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGSAERAPTL 289
>dbj|BAO50255.1| chloroplast chlorophyll AB-binding protein CP26, partial [Spinacia
oleracea]
Length = 181
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTGQGPVENL+AHLSDPFGNNLLTVI G+AER PTL
Sbjct: 140 FFIQAYVTGQGPVENLSAHLSDPFGNNLLTVIGGAAERVPTL 181
>emb|CAA78900.1| Lhcb5 protein [Pinus sylvestris] gi|1093837|prf||2104448A Lhcb5
gene
Length = 302
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FFLQAYVTG+GPVENLAAHLSDPFGNN+LTV+ GS ERAPTL
Sbjct: 261 FFLQAYVTGEGPVENLAAHLSDPFGNNILTVLGGSLERAPTL 302
>ref|XP_006288402.1| hypothetical protein CARUB_v10001659mg [Capsella rubella]
gi|482557108|gb|EOA21300.1| hypothetical protein
CARUB_v10001659mg [Capsella rubella]
Length = 281
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTG+GPVENLA HLSDPFGNNLLTVI+G+AERAPTL
Sbjct: 240 FFIQAYVTGEGPVENLAQHLSDPFGNNLLTVIAGTAERAPTL 281
>gb|EMJ03055.1| hypothetical protein PRUPE_ppa009496mg [Prunus persica]
Length = 290
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FFLQAYVTG+GPVENLA HLSDPFGNNLLTVI GS ERAPTL
Sbjct: 249 FFLQAYVTGEGPVENLAKHLSDPFGNNLLTVIGGSVERAPTL 290
>ref|XP_004241878.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
isoform 2 [Solanum lycopersicum]
Length = 273
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTGQGPVENLAAHLSDPFGNNLLTVI G++ER PTL
Sbjct: 232 FFIQAYVTGQGPVENLAAHLSDPFGNNLLTVIGGASERVPTL 273
>ref|XP_004241877.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
isoform 1 [Solanum lycopersicum]
Length = 286
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTGQGPVENLAAHLSDPFGNNLLTVI G++ER PTL
Sbjct: 245 FFIQAYVTGQGPVENLAAHLSDPFGNNLLTVIGGASERVPTL 286
>gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
Length = 280
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTG+GPVENLA HLSDPFGNNLLTVI+G+AERAPTL
Sbjct: 239 FFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280
>ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName:
Full=Chlorophyll a-b binding protein CP26,
chloroplastic; AltName: Full=LHCB5; AltName:
Full=LHCIIc; AltName: Full=Light-harvesting complex II
protein 5; Flags: Precursor
gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein
[Arabidopsis thaliana]
gi|11908106|gb|AAG41482.1|AF326900_1 putative
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642916|gb|AAK00400.1|AF339718_1 putative
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|14190463|gb|AAK55712.1|AF380631_1
AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|15983446|gb|AAL11591.1|AF424597_1
AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding
protein-like [Arabidopsis thaliana]
gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding
protein-like [Arabidopsis thaliana]
gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140
[Arabidopsis thaliana] gi|332657469|gb|AEE82869.1|
chlorophyll a-b binding protein CP26 [Arabidopsis
thaliana]
Length = 280
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTG+GPVENLA HLSDPFGNNLLTVI+G+AERAPTL
Sbjct: 239 FFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280
>emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
Length = 286
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTGQGPVENLAAHLSDPFGNNLLTVI G++ER PTL
Sbjct: 245 FFIQAYVTGQGPVENLAAHLSDPFGNNLLTVIGGASERVPTL 286
>ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata] gi|297318345|gb|EFH48767.1| hypothetical protein
ARALYDRAFT_489877 [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTG+GPVENLA HLSDPFGNNLLTVI+G+AERAPTL
Sbjct: 239 FFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280
>ref|XP_006441835.1| hypothetical protein CICLE_v10021452mg [Citrus clementina]
gi|557544097|gb|ESR55075.1| hypothetical protein
CICLE_v10021452mg [Citrus clementina]
Length = 293
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FFLQAYVTG+GPVENLA HLSDPF NNLLTVISG+AERAPTL
Sbjct: 252 FFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 293
>gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicum annuum]
Length = 287
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTGQGPVENLAAHLSDPFGNNLLTVI G+ ER PTL
Sbjct: 246 FFIQAYVTGQGPVENLAAHLSDPFGNNLLTVIGGATERVPTL 287
>gb|ACN40554.1| unknown [Picea sitchensis]
Length = 278
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTG+GPVENLAAHLSDPFGNNLLTV+ GS ERAPTL
Sbjct: 237 FFVQAYVTGEGPVENLAAHLSDPFGNNLLTVLGGSLERAPTL 278
>gb|ACN40433.1| unknown [Picea sitchensis]
Length = 303
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTG+GPVENLAAHLSDPFGNNLLTV+ GS ERAPTL
Sbjct: 262 FFVQAYVTGEGPVENLAAHLSDPFGNNLLTVLGGSLERAPTL 303
>gb|ABK23587.1| unknown [Picea sitchensis]
Length = 303
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 373 FFLQAYVTGQGPVENLAAHLSDPFGNNLLTVISGSAERAPTL 248
FF+QAYVTG+GPVENLAAHLSDPFGNNLLTV+ GS ERAPTL
Sbjct: 262 FFVQAYVTGEGPVENLAAHLSDPFGNNLLTVLGGSLERAPTL 303