BLASTX nr result
ID: Rehmannia26_contig00000101
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00000101
(314 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 60 4e-07
gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 58 1e-06
gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (Ru... 58 1e-06
gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (Ru... 58 1e-06
sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carbox... 56 4e-06
gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (Ru... 56 4e-06
gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase s... 55 7e-06
sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carbo... 55 7e-06
sp|Q43832.1|RBS2_SPIOL RecName: Full=Ribulose bisphosphate carbo... 55 7e-06
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 55 7e-06
gb|AAB81105.1| ribulose 1,5-bisphosphate carboxylase small subun... 55 7e-06
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 55 1e-05
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 55 1e-05
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/34 (82%), Positives = 33/34 (97%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
R++PAQASMVAPFTGLKSA+AFP TRK+ADIT+L
Sbjct: 16 RASPAQASMVAPFTGLKSASAFPVTRKSADITSL 49
>gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Sonneratia alba] gi|241865463|gb|ACS68764.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Sonneratia alba]
Length = 173
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
R+ PAQASMVAPFTGLKS++AFP TRK ADIT+L
Sbjct: 9 RTAPAQASMVAPFTGLKSSSAFPTTRKTADITSL 42
>gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia apetala]
Length = 178
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
R+ PAQASMVAPFTGLKS++AFP TRK ADIT+L
Sbjct: 10 RTAPAQASMVAPFTGLKSSSAFPTTRKTADITSL 43
>gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia alba]
Length = 178
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
R+ PAQASMVAPFTGLKS++AFP TRK ADIT+L
Sbjct: 10 RTAPAQASMVAPFTGLKSSSAFPTTRKTADITSL 43
>sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|2588890|dbj|BAA23214.1| small subunit of
ribulose-1,5-bisphosphate carboxylase/oxygenase [Fagus
crenata]
Length = 182
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/35 (82%), Positives = 32/35 (91%), Gaps = 1/35 (2%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRK-NADITTL 313
R+TPAQA+MVAPFTGLKS AAFPATRK N DIT+L
Sbjct: 16 RATPAQATMVAPFTGLKSTAAFPATRKSNNDITSL 50
>gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia ovata]
Length = 178
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
R+ PAQASM APFTGLKS++AFP TRK ADIT+L
Sbjct: 10 RTAPAQASMAAPFTGLKSSSAFPTTRKTADITSL 43
>gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
[Mesembryanthemum crystallinum]
Length = 180
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
R+TPAQASMVAPFTGLKS +AFP T+K+ DIT++
Sbjct: 13 RTTPAQASMVAPFTGLKSVSAFPVTKKSNDITSI 46
>sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|304444|gb|AAA03694.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 180
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
R+TPAQASMVAPFTGLKS +AFP T+K+ DIT++
Sbjct: 13 RTTPAQASMVAPFTGLKSVSAFPVTKKSNDITSI 46
>sp|Q43832.1|RBS2_SPIOL RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|1297052|emb|CAA66201.1|
ribulose-bisphosphate carboxylase [Spinacia oleracea]
Length = 180
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +2
Query: 218 TPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
TPAQASMVAPFTGLKS FPAT+KN DIT+L
Sbjct: 17 TPAQASMVAPFTGLKSTVGFPATKKNDDITSL 48
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 1/35 (2%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRK-NADITTL 313
R++PAQASMVAPFTGLKS +AFP TRK N DITTL
Sbjct: 16 RASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTL 50
>gb|AAB81105.1| ribulose 1,5-bisphosphate carboxylase small subunit [Spinacia
oleracea]
Length = 180
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +2
Query: 218 TPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
TPAQASMVAPFTGLKS FPAT+KN DIT+L
Sbjct: 17 TPAQASMVAPFTGLKSTVGFPATKKNDDITSL 48
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
R+ PAQASMVAPFTGLKS AAFP TRK DIT+L
Sbjct: 16 RAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSL 49
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 212 RSTPAQASMVAPFTGLKSAAAFPATRKNADITTL 313
R+ PAQASMVAPFTGLKS AAFP TRK DIT+L
Sbjct: 16 RAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSL 49