BLASTX nr result
ID: Rehmannia25_contig00032728
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00032728
(424 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340958.1| PREDICTED: pentatricopeptide repeat-containi... 137 1e-30
ref|XP_004247938.1| PREDICTED: pentatricopeptide repeat-containi... 137 1e-30
gb|EMJ25875.1| hypothetical protein PRUPE_ppa025910mg, partial [... 133 3e-29
gb|EOY06239.1| Tetratricopeptide repeat-like superfamily protein... 128 7e-28
ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
gb|EXB58833.1| hypothetical protein L484_002770 [Morus notabilis] 126 3e-27
ref|XP_004297946.1| PREDICTED: pentatricopeptide repeat-containi... 125 6e-27
ref|XP_006420400.1| hypothetical protein CICLE_v10004542mg [Citr... 124 2e-26
ref|XP_006480219.1| PREDICTED: pentatricopeptide repeat-containi... 123 2e-26
ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containi... 121 8e-26
ref|XP_002314516.1| hypothetical protein POPTR_0010s07440g [Popu... 121 8e-26
emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera] 121 1e-25
ref|XP_003590730.1| Pentatricopeptide repeat-containing protein ... 117 2e-24
ref|XP_004495254.1| PREDICTED: putative pentatricopeptide repeat... 113 2e-23
ref|XP_006854426.1| hypothetical protein AMTR_s00039p00210570 [A... 111 1e-22
ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat... 108 6e-22
gb|EOY19148.1| Pentatricopeptide repeat (PPR) superfamily protei... 108 1e-21
gb|EOY19146.1| Pentatricopeptide repeat (PPR) superfamily protei... 108 1e-21
emb|CBI18084.3| unnamed protein product [Vitis vinifera] 105 8e-21
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 105 8e-21
>ref|XP_006340958.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum tuberosum]
Length = 632
Score = 137 bits (346), Expect = 1e-30
Identities = 63/91 (69%), Positives = 77/91 (84%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+ D AYR LI++EPEN SNY++LSNLYA+SKRWDVVAQVR M+++GLKK PGCSWIS+N
Sbjct: 526 VHDLAYRFLIQMEPENPSNYVSLSNLYASSKRWDVVAQVRTMMKDKGLKKFPGCSWISVN 585
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMK 147
+ THSF+V DKSHPC +IY MLD L+ AMK
Sbjct: 586 TETHSFYVADKSHPCCVVIYEMLDQLILAMK 616
>ref|XP_004247938.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum lycopersicum]
Length = 632
Score = 137 bits (346), Expect = 1e-30
Identities = 63/91 (69%), Positives = 78/91 (85%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+ D AYR LI++EPEN SNY++LSNLYA+SKRWDVVAQVR M+++GLKK PGCSWIS+N
Sbjct: 526 VHDLAYRFLIQMEPENPSNYVSLSNLYASSKRWDVVAQVRTMMKDKGLKKFPGCSWISVN 585
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMK 147
+ THSF+V +KSHPCS +IY MLD L+ AMK
Sbjct: 586 TETHSFYVANKSHPCSVVIYEMLDQLILAMK 616
>gb|EMJ25875.1| hypothetical protein PRUPE_ppa025910mg, partial [Prunus persica]
Length = 536
Score = 133 bits (334), Expect = 3e-29
Identities = 60/87 (68%), Positives = 75/87 (86%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+QD AYR LI++EP+N SNYI+LSN YA+S+RWDVVA++R+ M+ERGLKK PGCSWISIN
Sbjct: 449 MQDLAYRFLIQLEPKNPSNYISLSNFYASSRRWDVVAEMRRMMKERGLKKAPGCSWISIN 508
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LV 159
S TH F+V DK+HPCS+ IY MLD L+
Sbjct: 509 SKTHCFYVADKAHPCSNSIYQMLDYLI 535
>gb|EOY06239.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 638
Score = 128 bits (322), Expect = 7e-28
Identities = 61/105 (58%), Positives = 79/105 (75%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+QD AYR LI++EPEN SNY++LSNL+A+SKRW+ VA +RK M+ERGL+K PGCSWIS+N
Sbjct: 531 MQDLAYRFLIQLEPENPSNYVSLSNLHASSKRWNAVAGLRKMMKERGLRKAPGCSWISMN 590
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNPDFVYLMEV 105
TH F+V DK+HP S IY +LD L+ MK Y DF L ++
Sbjct: 591 GKTHCFYVADKAHPHSSSIYEILDDLIFIMKGAGYPTDFEELTQI 635
>ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 127 bits (318), Expect = 2e-27
Identities = 62/99 (62%), Positives = 75/99 (75%)
Frame = -3
Query: 416 QDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISINS 237
+D AYR L+E+EPEN SNYI+LSN YA+ +RWDVV +VR M+ERGLKKVPGCSWI+I+
Sbjct: 531 RDLAYRHLLELEPENPSNYISLSNTYASDRRWDVVTEVRTIMKERGLKKVPGCSWITISG 590
Query: 236 ATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNPDFV 120
THSF V DK+HP S LIY ML LVS M C + D +
Sbjct: 591 KTHSFSVADKAHPSSSLIYEMLGDLVSIMTDGCADIDIL 629
>gb|EXB58833.1| hypothetical protein L484_002770 [Morus notabilis]
Length = 617
Score = 126 bits (317), Expect = 3e-27
Identities = 60/96 (62%), Positives = 76/96 (79%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+Q AYR LIE+EP N SN+I+LSN+YA+SK+WDVVA+VR M+ERGL+K PGCSWISIN
Sbjct: 522 MQQLAYRCLIELEPYNPSNFISLSNVYASSKQWDVVAEVRTVMKERGLRKDPGCSWISIN 581
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYN 132
S T+ F+V DK HPCS+ +Y ML+ LV MK Y+
Sbjct: 582 STTNCFYVADKDHPCSNSVYDMLESLVYVMKEAKYS 617
>ref|XP_004297946.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 125 bits (314), Expect = 6e-27
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+QD AY+ LI++EPEN SNYI+ SN +A+S+RWD+VA+ R M++RGL+K PGCSWISI
Sbjct: 527 MQDLAYKFLIQLEPENPSNYISASNFFASSRRWDIVAETRTMMKDRGLRKTPGCSWISIT 586
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMK 147
THSFFV DK HPC D IY MLD L+ +K
Sbjct: 587 GKTHSFFVADKVHPCCDSIYEMLDFLILVIK 617
>ref|XP_006420400.1| hypothetical protein CICLE_v10004542mg [Citrus clementina]
gi|557522273|gb|ESR33640.1| hypothetical protein
CICLE_v10004542mg [Citrus clementina]
Length = 632
Score = 124 bits (310), Expect = 2e-26
Identities = 57/97 (58%), Positives = 76/97 (78%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+QD AY++LI++EPEN SNY++LSNLYA+S+RWD VA++R M++RGLKK PGCSWISI+
Sbjct: 523 MQDLAYKSLIQLEPENPSNYVSLSNLYASSRRWDAVAELRTMMKDRGLKKSPGCSWISIH 582
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNP 129
TH F V DK++PCS IY MLD L+ M+ +P
Sbjct: 583 GKTHCFSVADKANPCSVSIYEMLDDLILIMRGAAASP 619
>ref|XP_006480219.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Citrus sinensis]
Length = 625
Score = 123 bits (309), Expect = 2e-26
Identities = 57/97 (58%), Positives = 75/97 (77%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+Q AY++LI++EPEN SNY++LSNLYA+S+RWD VA++R M++RGLKK PGCSWISI+
Sbjct: 523 MQALAYKSLIQLEPENPSNYVSLSNLYASSRRWDAVAELRTMMKDRGLKKSPGCSWISIH 582
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNP 129
TH F V DK+HPCS IY MLD L+ M+ +P
Sbjct: 583 GKTHCFSVADKAHPCSVSIYEMLDDLILIMRGAASSP 619
>ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 121 bits (304), Expect = 8e-26
Identities = 55/97 (56%), Positives = 76/97 (78%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+Q+ AYR LI++EPEN SNY+++SNLYA+S+RWD VA+VR+ M+++ L+KVPGCSWISIN
Sbjct: 523 MQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISIN 582
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNP 129
+ TH F+V DK+HP + IY MLD L+ M +P
Sbjct: 583 NKTHCFYVADKAHPSATSIYNMLDDLLLTMNDAICSP 619
>ref|XP_002314516.1| hypothetical protein POPTR_0010s07440g [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| hypothetical protein
POPTR_0010s07440g [Populus trichocarpa]
Length = 632
Score = 121 bits (304), Expect = 8e-26
Identities = 56/99 (56%), Positives = 74/99 (74%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+QD AYR L+++EPEN SNY++LSNL+A+S+RWDVV++VR M++R L K PGCSWISIN
Sbjct: 527 MQDLAYRFLVQLEPENPSNYVSLSNLHASSRRWDVVSEVRTMMKDRCLTKTPGCSWISIN 586
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNPDF 123
+ TH F+ DK HPCS IY +L L+ MK + DF
Sbjct: 587 NTTHFFYAADKLHPCSKSIYELLGGLILLMKGPAVSHDF 625
>emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 121 bits (303), Expect = 1e-25
Identities = 55/97 (56%), Positives = 76/97 (78%)
Frame = -3
Query: 419 IQDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISIN 240
+Q+ AYR LI++EP+N SNY+++SNLYA+S+RWD VA+VR+ M+++ L+KVPGCSWISIN
Sbjct: 523 MQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISIN 582
Query: 239 SATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNP 129
+ TH F+V DK+HP S IY MLD L+ M +P
Sbjct: 583 NKTHCFYVADKAHPSSTSIYNMLDDLLLTMNDAICSP 619
>ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 627
Score = 117 bits (292), Expect = 2e-24
Identities = 57/99 (57%), Positives = 71/99 (71%)
Frame = -3
Query: 416 QDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISINS 237
+D AYR L+E+EPEN SNYI+LSN YA+S+RWD + +VR M+ERGL+KVPG SWI+I+
Sbjct: 528 RDLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISD 587
Query: 236 ATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNPDFV 120
H F V DK HP S IY MLD LVS M C + D +
Sbjct: 588 KNHFFTVADKVHPSSSSIYEMLDDLVSIMTDGCADIDIL 626
>ref|XP_004495254.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cicer arietinum]
Length = 629
Score = 113 bits (283), Expect = 2e-23
Identities = 57/97 (58%), Positives = 71/97 (73%)
Frame = -3
Query: 416 QDEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISINS 237
+D AY+ L+E+EPEN SNYI+LSN YA+ +RWDVV +VR M+ERGL+KVPG S I+I+
Sbjct: 530 RDMAYKCLLELEPENPSNYISLSNTYASYRRWDVVTEVRTMMKERGLRKVPGISSITISG 589
Query: 236 ATHSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNPD 126
THSF V D +HP S IY MLD LVS M C + D
Sbjct: 590 KTHSFSVADTTHPSSSSIYEMLDDLVSIMTDGCTDID 626
>ref|XP_006854426.1| hypothetical protein AMTR_s00039p00210570 [Amborella trichopoda]
gi|548858102|gb|ERN15893.1| hypothetical protein
AMTR_s00039p00210570 [Amborella trichopoda]
Length = 674
Score = 111 bits (277), Expect = 1e-22
Identities = 52/100 (52%), Positives = 73/100 (73%)
Frame = -3
Query: 407 AYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISINSATH 228
A + L+E+EP+N ++Y++LSN+YAAS WD V++VR M+ERGL+K+PG SWI +NS H
Sbjct: 572 ASKYLLELEPQNPAHYVSLSNVYAASGIWDGVSEVRLEMKERGLRKLPGYSWIIVNSKVH 631
Query: 227 SFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNPDFVYLME 108
SF+V DKSHP S LIY +LD ++ MK Y P+ L +
Sbjct: 632 SFYVSDKSHPSSSLIYAVLDRMILEMKGAGYAPEIKCLSQ 671
>ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Fragaria vesca subsp. vesca]
Length = 688
Score = 108 bits (271), Expect = 6e-22
Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Frame = -3
Query: 407 AYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISINSATH 228
A + LIE+EP NS++Y+ LSN+Y+AS++WD A +R M E+GL+K+PGCSWI +N H
Sbjct: 507 ALKQLIELEPWNSAHYVLLSNVYSASQKWDEAANIRSRMNEQGLQKIPGCSWIEVNGVVH 566
Query: 227 SFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNP--DFV 120
F VGDKSH SD IY L+ L +K Y P DFV
Sbjct: 567 EFLVGDKSHELSDKIYAKLNELAKDLKAAGYIPTTDFV 604
>gb|EOY19148.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 3
[Theobroma cacao] gi|508727252|gb|EOY19149.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 3 [Theobroma cacao]
Length = 503
Score = 108 bits (269), Expect = 1e-21
Identities = 49/101 (48%), Positives = 66/101 (65%)
Frame = -3
Query: 413 DEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISINSA 234
+ + LIE+EP NS NY+ LSN+Y+AS +WD A++R M ERG++KVPG SWI +N
Sbjct: 320 EHVLKKLIELEPWNSGNYVLLSNIYSASHKWDDAAKIRSIMNERGIQKVPGYSWIEVNGF 379
Query: 233 THSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNPDFVYLM 111
H F VGDKSHP S++IY L L +K Y P Y++
Sbjct: 380 VHEFLVGDKSHPLSEMIYTKLGELAKELKAAGYVPTTEYVL 420
>gb|EOY19146.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508727250|gb|EOY19147.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 688
Score = 108 bits (269), Expect = 1e-21
Identities = 49/101 (48%), Positives = 66/101 (65%)
Frame = -3
Query: 413 DEAYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISINSA 234
+ + LIE+EP NS NY+ LSN+Y+AS +WD A++R M ERG++KVPG SWI +N
Sbjct: 505 EHVLKKLIELEPWNSGNYVLLSNIYSASHKWDDAAKIRSIMNERGIQKVPGYSWIEVNGF 564
Query: 233 THSFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNPDFVYLM 111
H F VGDKSHP S++IY L L +K Y P Y++
Sbjct: 565 VHEFLVGDKSHPLSEMIYTKLGELAKELKAAGYVPTTEYVL 605
>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 105 bits (261), Expect = 8e-21
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = -3
Query: 407 AYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISINSATH 228
A + LIE+EP NS NY+ LSN+Y+A+ +WD A+VR M E+ ++K PGCSWI ++ H
Sbjct: 315 ALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVH 374
Query: 227 SFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNP--DFV 120
F VGDK HP S+ IY LD L MK+ Y P DFV
Sbjct: 375 EFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFV 412
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 105 bits (261), Expect = 8e-21
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = -3
Query: 407 AYRTLIEIEPENSSNYIALSNLYAASKRWDVVAQVRKGMRERGLKKVPGCSWISINSATH 228
A + LIE+EP NS NY+ LSN+Y+A+ +WD A+VR M E+ ++K PGCSWI ++ H
Sbjct: 505 ALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVH 564
Query: 227 SFFVGDKSHPCSDLIYVMLD*LVSAMKLTCYNP--DFV 120
F VGDK HP S+ IY LD L MK+ Y P DFV
Sbjct: 565 EFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFV 602