BLASTX nr result

ID: Rehmannia25_contig00032703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00032703
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593327.1| hypothetical protein MTR_2g010270 [Medicago ...    55   7e-06
ref|XP_003592631.1| Replication factor A protein [Medicago trunc...    55   1e-05

>ref|XP_003593327.1| hypothetical protein MTR_2g010270 [Medicago truncatula]
           gi|355482375|gb|AES63578.1| hypothetical protein
           MTR_2g010270 [Medicago truncatula]
          Length = 315

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/93 (30%), Positives = 51/93 (54%)
 Frame = -2

Query: 349 LILFN*GTRIHATIRRQQVLKFQSLLQEGHLYAIKNFIIAENSMXXXXXXXXXKIIFVGK 170
           L++   G RIHAT R+  V KF+S++QEG  Y ++N ++  N           K+  +  
Sbjct: 26  LVVDEKGGRIHATSRKDLVAKFRSMVQEGGTYQLENAMVGFNESPYKVTSHKHKLSMMHN 85

Query: 169 THVTEYYDESFPMRMYELKPFNALSNVDIVDES 71
           ++ T+ +  + PM ++E KPFN + +  + + S
Sbjct: 86  SNFTKVHSPAIPMNVFEFKPFNEILSSTVEEVS 118


>ref|XP_003592631.1| Replication factor A protein [Medicago truncatula]
           gi|355481679|gb|AES62882.1| Replication factor A protein
           [Medicago truncatula]
          Length = 301

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = -2

Query: 331 GTRIHATIRRQQVLKFQSLLQEGHLYAIKNFIIAENSMXXXXXXXXXKIIFVGKTHVTEY 152
           G RIHAT R+  V KF+S++QEG  Y ++N I+  N           K+  +  +  T+ 
Sbjct: 43  GGRIHATARKDLVAKFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKLKMMHNSTFTKV 102

Query: 151 YDESFPMRMYELKPFNAL--SNVDIVDESIL 65
           +  S PM +++ KPFN +  S V+ V   ++
Sbjct: 103 HSPSIPMNVFKFKPFNEILSSTVEEVSTDVI 133


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