BLASTX nr result

ID: Rehmannia25_contig00032690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00032690
         (419 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun...   107   1e-21
gb|EOY06787.1| Poly(A) polymerase 3, putative isoform 2 [Theobro...   103   2e-20
gb|EOY06786.1| Poly(A) polymerase, putative isoform 1 [Theobroma...   103   2e-20
ref|XP_006488811.1| PREDICTED: poly(A) polymerase-like [Citrus s...    95   1e-17
ref|XP_006419338.1| hypothetical protein CICLE_v10004938mg [Citr...    95   1e-17
ref|XP_002311376.2| hypothetical protein POPTR_0008s10210g [Popu...    94   2e-17
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...    89   6e-16
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]    88   1e-15
gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-393...    76   5e-12
ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana] gi|...    76   5e-12
gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]               76   5e-12
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop...    73   3e-11
ref|XP_006299136.1| hypothetical protein CARUB_v10015278mg [Caps...    72   6e-11
ref|XP_006349957.1| PREDICTED: poly(A) polymerase-like [Solanum ...    65   7e-09
ref|XP_004252931.1| PREDICTED: poly(A) polymerase-like [Solanum ...    61   1e-07
ref|XP_004503248.1| PREDICTED: poly(A) polymerase-like [Cicer ar...    59   5e-07
gb|ESW19380.1| hypothetical protein PHAVU_006G119900g [Phaseolus...    55   1e-05

>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 492

 Score =  107 bits (268), Expect = 1e-21
 Identities = 51/97 (52%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGYEGRIGRIDLRVVKASELPK-TKTNAG 242
           P+V+FYWGL P RSN+I +E + +DFLRNI++GY G   +++L +VKA+ELPK  + N+G
Sbjct: 387 PNVVFYWGLNPSRSNYIDLESVEEDFLRNIYSGYHGTRRKLELSIVKAAELPKNAQFNSG 446

Query: 241 S-KGTRAYWRVVDSNQPKIALYSRHVPQHFVGYLASN 134
           + K  +AYW+VVD  Q +   YS+H+P +FVGYLA+N
Sbjct: 447 NGKKMKAYWKVVDKEQ-RTPAYSQHLPGYFVGYLATN 482


>gb|EOY06787.1| Poly(A) polymerase 3, putative isoform 2 [Theobroma cacao]
          Length = 416

 Score =  103 bits (257), Expect = 2e-20
 Identities = 47/97 (48%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGYEGRIGRIDLRVVKASELPKTK--TNA 245
           P+V+FYWGL PG++N I IE +R+DF RNI  GY+G + R++L +V+AS+L K       
Sbjct: 310 PNVVFYWGLQPGKTNVIDIESLREDFWRNISNGYQGLLRRMELSIVQASQLAKYAQFDTL 369

Query: 244 GSKGTRAYWRVVDSNQPKIALYSRHVPQHFVGYLASN 134
             KGT+A W++ D NQ +I +YS+H+P + VGYL++N
Sbjct: 370 SRKGTKASWKMSDCNQQRIPIYSQHLPHYVVGYLSTN 406


>gb|EOY06786.1| Poly(A) polymerase, putative isoform 1 [Theobroma cacao]
          Length = 555

 Score =  103 bits (257), Expect = 2e-20
 Identities = 47/97 (48%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGYEGRIGRIDLRVVKASELPKTK--TNA 245
           P+V+FYWGL PG++N I IE +R+DF RNI  GY+G + R++L +V+AS+L K       
Sbjct: 385 PNVVFYWGLQPGKTNVIDIESLREDFWRNISNGYQGLLRRMELSIVQASQLAKYAQFDTL 444

Query: 244 GSKGTRAYWRVVDSNQPKIALYSRHVPQHFVGYLASN 134
             KGT+A W++ D NQ +I +YS+H+P + VGYL++N
Sbjct: 445 SRKGTKASWKMSDCNQQRIPIYSQHLPHYVVGYLSTN 481


>ref|XP_006488811.1| PREDICTED: poly(A) polymerase-like [Citrus sinensis]
          Length = 570

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/94 (46%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGYEGRIGRIDLRVVKASELPK-TKTNAG 242
           PHV+FYWGL PGR+N + I  +  DFL+NI  G++G  GR+ L VV+AS+L K ++ + G
Sbjct: 464 PHVVFYWGLQPGRTNLLDIVAVEKDFLKNIHNGFQGSPGRMGLLVVQASQLSKSSQLDFG 523

Query: 241 S-KGTRAYWRVVDSNQPKIALYSRHVPQHFVGYL 143
           S + T+A W+ +D N P+I +YS+H+P + +GY+
Sbjct: 524 SGRRTKACWKNLDYNLPRIPVYSQHLPNYIIGYV 557


>ref|XP_006419338.1| hypothetical protein CICLE_v10004938mg [Citrus clementina]
           gi|557521211|gb|ESR32578.1| hypothetical protein
           CICLE_v10004938mg [Citrus clementina]
          Length = 458

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/94 (46%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGYEGRIGRIDLRVVKASELPK-TKTNAG 242
           PHV+FYWGL PGR+N + I  +  DFL+NI  G++G  GR+ L VV+AS+L K ++ + G
Sbjct: 352 PHVVFYWGLQPGRTNLLDIVAVEKDFLKNIHNGFQGSPGRMGLLVVQASQLSKSSQLDFG 411

Query: 241 S-KGTRAYWRVVDSNQPKIALYSRHVPQHFVGYL 143
           S + T+A W+ +D N P+I +YS+H+P + +GY+
Sbjct: 412 SGRRTKACWKNLDYNLPRIPVYSQHLPNYIIGYV 445


>ref|XP_002311376.2| hypothetical protein POPTR_0008s10210g [Populus trichocarpa]
           gi|550332775|gb|EEE88743.2| hypothetical protein
           POPTR_0008s10210g [Populus trichocarpa]
          Length = 495

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/97 (44%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGYEGRIGRIDLRVVKASELPKTK--TNA 245
           P+V+FYWGL   R N + IE + +DF R+I+ GY G  G+++L +V+ASELPK     + 
Sbjct: 389 PNVVFYWGLNRSRCNFVYIEPVEEDFSRSIYCGYYGIRGKMELSIVQASELPKNARFDSG 448

Query: 244 GSKGTRAYWRVVDSNQPKIALYSRHVPQHFVGYLASN 134
             K  +A W+++D NQ +   YS+H+P +FVGY+ SN
Sbjct: 449 NGKKMKACWKMLDYNQRRTPAYSQHLPSYFVGYVESN 485


>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
           gi|296083219|emb|CBI22855.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 40/100 (40%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFT-GYEGRIGRIDLRVVKASELP-KTKTNA 245
           P+V+F+WG+ PGR N   I+++ DDF++NI   GY+G  G+++L V+  S+LP   + + 
Sbjct: 456 PNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAQLDT 515

Query: 244 GSKG-TRAYWRVVDSNQPKIALYSRHVPQHFVGYLASNEN 128
           GS+  T+A WR+ + +QP++ ++S+H+P +FVGY A++++
Sbjct: 516 GSRNRTKACWRMFNYHQPRVPVFSQHLPLYFVGYAATDKD 555


>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 40/100 (40%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFT-GYEGRIGRIDLRVVKASELP-KTKTNA 245
           P+V+F+WG+ PGR N   I+++ DDF++NI   GY+G  G+++L V+  S+LP     + 
Sbjct: 497 PNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAXLDT 556

Query: 244 GSKG-TRAYWRVVDSNQPKIALYSRHVPQHFVGYLASNEN 128
           GS+  T+A WR+ + +QP++ ++S+H+P +FVGY A++++
Sbjct: 557 GSRNRTKACWRMFNYHQPRVPVFSQHLPLYFVGYAATDKD 596


>gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
          Length = 482

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTG-YEGRIGRIDLRVVKASELPKT----K 254
           P+++FYWGL     N   IE ++ DFL+N+ +G + G +GRI L +VKAS+LPK      
Sbjct: 371 PNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLPKNGECGS 430

Query: 253 TNAGSKGTRAYWRVVDSNQ-PKIALYSRHVPQHFVGY 146
            N   K T+  WR+ +  Q   + +YS+H+P + VGY
Sbjct: 431 NNRSKKVTKTCWRIREDKQCNNVPVYSKHLPGYVVGY 467


>ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
           gi|62320636|dbj|BAD95301.1| poly(A) polymerase
           [Arabidopsis thaliana] gi|332640894|gb|AEE74415.1|
           poly(A) polymerase 3 [Arabidopsis thaliana]
          Length = 507

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTG-YEGRIGRIDLRVVKASELPKT----K 254
           P+++FYWGL     N   IE ++ DFL+N+ +G + G +GRI L +VKAS+LPK      
Sbjct: 396 PNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLPKNGECGS 455

Query: 253 TNAGSKGTRAYWRVVDSNQ-PKIALYSRHVPQHFVGY 146
            N   K T+  WR+ +  Q   + +YS+H+P + VGY
Sbjct: 456 NNRSKKVTKTCWRIREDKQCNNVPVYSKHLPGYVVGY 492


>gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
          Length = 483

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTG-YEGRIGRIDLRVVKASELPKT----K 254
           P+++FYWGL     N   IE ++ DFL+N+ +G + G +GRI L +VKAS+LPK      
Sbjct: 372 PNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLPKNGECGS 431

Query: 253 TNAGSKGTRAYWRVVDSNQ-PKIALYSRHVPQHFVGY 146
            N   K T+  WR+ +  Q   + +YS+H+P + VGY
Sbjct: 432 NNRSKKVTKTCWRIREDKQCNNVPVYSKHLPGYVVGY 468


>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
           lyrata] gi|297328320|gb|EFH58739.1| polynucleotide
           adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTG-YEGRIGRIDLRVVKASELPK----TK 254
           P+++FYWGL     N   IE +  +FL+N+ +G ++G +GRI L VVK S+LPK      
Sbjct: 398 PNIVFYWGLQLRTINVSDIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLPKNGECAS 457

Query: 253 TNAGSKGTRAYWRVVDSNQ-PKIALYSRHVPQHFVGY 146
            N   K T+  WR+ ++ Q   + +YS H+P + VGY
Sbjct: 458 NNRSKKVTKTCWRIRENKQCNNVPVYSHHLPGYVVGY 494


>ref|XP_006299136.1| hypothetical protein CARUB_v10015278mg [Capsella rubella]
           gi|482567845|gb|EOA32034.1| hypothetical protein
           CARUB_v10015278mg [Capsella rubella]
          Length = 500

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTG-YEGRIGRIDLRVVKASELPK----TK 254
           P+++FYWGL     N   IE +  +FL+N+ +G ++G +GRI L VVKAS+LP+      
Sbjct: 388 PNIVFYWGLQLRTINVSDIESVETNFLKNLNSGSFQGPVGRIHLSVVKASQLPRNSDCAS 447

Query: 253 TNAGSKGTRAYWRV---VDSNQPK-IALYSRHVPQHFVGY 146
            N   K TR  WR+    D  Q K + +YS+H+P + VGY
Sbjct: 448 DNRSKKVTRTCWRIRIREDKQQCKNVPVYSKHLPGYVVGY 487


>ref|XP_006349957.1| PREDICTED: poly(A) polymerase-like [Solanum tuberosum]
          Length = 560

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGY-EGRIGRIDLRVVKASELPKTK---T 251
           P+VIFYWGL  GR++ I+ EL+ + FL++I  G  +   G + L +VKA +LPK     T
Sbjct: 449 PNVIFYWGLPTGRADLINAELVEEYFLKSIDHGLNQVSTGTMKLSIVKAYQLPKKADQLT 508

Query: 250 NAGSKGTRAYWRVVDSN------QPKIALYSRHVPQHFVGYLASNEN 128
               K ++  WRVVD N      QPK   Y  H  +    YL +NEN
Sbjct: 509 ALERKNSKTCWRVVDGNRKNTVPQPK---YKPHCAESAGDYLPTNEN 552


>ref|XP_004252931.1| PREDICTED: poly(A) polymerase-like [Solanum lycopersicum]
          Length = 560

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGY-EGRIGRIDLRVVKASELPKTKTN-- 248
           P+VIFYWGL  GR++  + +L+ + FL++I  G  +   G + L +VKA +LPK      
Sbjct: 449 PNVIFYWGLPTGRADLTNADLVEEYFLKSIDHGLNQVSTGTMKLSIVKAYQLPKKADQLI 508

Query: 247 -AGSKGTRAYWRVVDSNQPKIAL---YSRHVPQHFVGYLASNEN 128
               K ++  WRVVD N+ K      Y  H  +    YL +NEN
Sbjct: 509 APERKNSKPCWRVVDGNRKKTPAQPKYKPHCAESAGDYLPTNEN 552


>ref|XP_004503248.1| PREDICTED: poly(A) polymerase-like [Cicer arietinum]
          Length = 485

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGYEGRIGRIDLRVVKASELPKTK--TNA 245
           P+V FYWGL P R+N + I+ +  +F++ I  GYE   G+++L ++   +LPK     + 
Sbjct: 400 PNVAFYWGLQPSRNNFVDIDFLEREFMKIINNGYECSHGKMELSILLDPQLPKNAQFDDE 459

Query: 244 GSKGTRAYWRVVDSNQPK 191
             KG +  W+++D +  K
Sbjct: 460 TVKGRKTLWKIIDHDNKK 477


>gb|ESW19380.1| hypothetical protein PHAVU_006G119900g [Phaseolus vulgaris]
          Length = 596

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 20/52 (38%), Positives = 37/52 (71%)
 Frame = -2

Query: 418 PHVIFYWGLCPGRSNHISIELIRDDFLRNIFTGYEGRIGRIDLRVVKASELP 263
           P+V+FYWGL P + N + I+ ++ +F++ I  GYEG  G++++ ++  S+LP
Sbjct: 544 PNVVFYWGLQPNKKNFLDIDSVKGEFMKIIKNGYEGSPGKMEMSILLGSQLP 595


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