BLASTX nr result
ID: Rehmannia25_contig00032681
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00032681
(374 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis... 72 1e-10
dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana] 72 1e-10
dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana] 72 1e-10
ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Caps... 72 1e-10
ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidop... 72 1e-10
ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arab... 72 1e-10
ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 71 2e-10
ref|XP_004984246.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 69 5e-10
ref|XP_006403686.1| hypothetical protein EUTSA_v10010545mg [Eutr... 69 8e-10
ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [S... 69 8e-10
tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays] 68 1e-09
gb|ACR36437.1| unknown [Zea mays] 68 1e-09
ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays] gi|... 68 1e-09
ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 68 1e-09
ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutr... 67 2e-09
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps... 67 2e-09
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab... 67 2e-09
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 67 2e-09
ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 67 2e-09
gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indi... 67 2e-09
>ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa
ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160
[Arabidopsis thaliana] gi|18655393|gb|AAL76152.1|
AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
Length = 342
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 296 RSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 339
>dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 280 RSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 323
>dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 288 RSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 331
>ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Capsella rubella]
gi|482560193|gb|EOA24384.1| hypothetical protein
CARUB_v10017634mg [Capsella rubella]
Length = 327
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 281 RSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 324
>ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
Length = 363
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 317 RSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 360
>ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata] gi|297323759|gb|EFH54180.1| hypothetical protein
ARALYDRAFT_348440 [Arabidopsis lyrata subsp. lyrata]
Length = 339
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT+SS +EV+KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 293 RSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 336
>ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT S EEVEKA++NL+GTDLDGRQ+RV AEAR PR
Sbjct: 226 RSRGFGFVTYGSSEEVEKAVSNLDGTDLDGRQIRVTVAEARQPR 269
>ref|XP_004984246.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Setaria
italica]
Length = 262
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT S EEVE AI+NL+G DLDGRQ+RV AE+RPPR
Sbjct: 216 RSRGFGFVTYGSSEEVENAISNLDGADLDGRQIRVTVAESRPPR 259
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVTMSS EEVE A+ NG LDGR L+V+S A PPR
Sbjct: 122 RSRGFGFVTMSSVEEVEVAVEQFNGYVLDGRSLKVNSGPA-PPR 164
>ref|XP_006403686.1| hypothetical protein EUTSA_v10010545mg [Eutrema salsugineum]
gi|557104805|gb|ESQ45139.1| hypothetical protein
EUTSA_v10010545mg [Eutrema salsugineum]
Length = 324
Score = 68.6 bits (166), Expect = 8e-10
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT+ S +EV KAI +LNG DLDGRQ+RV AEARPPR
Sbjct: 278 RSKGFGFVTLGSPQEVTKAINSLNGADLDGRQIRVSEAEARPPR 321
>ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein
SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 68.6 bits (166), Expect = 8e-10
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT S EEVE AI+NL+G+DLDGRQ+RV AE++PPR
Sbjct: 216 RSRGFGFVTYGSAEEVENAISNLDGSDLDGRQIRVTVAESKPPR 259
>tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT S EEVE AI+NL+G DLDGRQ+RV AE++PPR
Sbjct: 216 RSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPR 259
>gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT S EEVE AI+NL+G DLDGRQ+RV AE++PPR
Sbjct: 216 RSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPR 259
>ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea
mays]
Length = 264
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT S EEVE AI+NL+G DLDGRQ+RV AE++PPR
Sbjct: 218 RSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPR 261
>ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Oryza
brachyantha]
Length = 262
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT S EEVE A++NL+GTDLDGRQ+RV AE+R PR
Sbjct: 216 RSRGFGFVTYGSAEEVENAVSNLDGTDLDGRQIRVTVAESRQPR 259
>ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum]
gi|557112071|gb|ESQ52355.1| hypothetical protein
EUTSA_v10017023mg [Eutrema salsugineum]
Length = 292
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT +S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 246 RSKGFGFVTYNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPR 289
>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
gi|482563453|gb|EOA27643.1| hypothetical protein
CARUB_v10023790mg [Capsella rubella]
Length = 284
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT +S +EV+ AI +LNG DLDGRQ+RV AEARPPR
Sbjct: 238 RSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPR 281
>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RS+GFGFVT +S +EV+ AI +LNG DLDGRQ+RV AEARPPR
Sbjct: 243 RSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPR 286
>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X2 [Solanum tuberosum]
Length = 291
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT SS +EV KAI +LNG DLDGR +RV +AE RPPR
Sbjct: 245 RSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPR 288
>ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X1 [Solanum tuberosum]
Length = 301
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT SS +EV KAI +LNG DLDGR +RV +AE RPPR
Sbjct: 255 RSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPR 298
>gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVT S EEVE A++NL+G D+DGRQ+RV AE++PPR
Sbjct: 219 RSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAESKPPR 262
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = +3
Query: 3 RSRGFGFVTMSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 134
RSRGFGFVTMSS EEVE A+ NG LDGR LRV+S PPR
Sbjct: 125 RSRGFGFVTMSSVEEVEAAVEQFNGYILDGRSLRVNSGPP-PPR 167